Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_G18
(510 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q26065|ACT_PLAMG Actin, adductor muscle 294 9e-80
sp|P53464|ACTM_HELTB Actin, cytoskeletal (M) 294 9e-80
sp|P53463|ACTM_HELER Actin, cytoskeletal (M) 294 9e-80
sp|O16808|ACT_MAYDE Actin 293 1e-79
sp|P91754|ACT_LUMRU Actin 293 2e-79
sp|P92176|ACT2_LUMTE Actin-2 293 2e-79
sp|P92182|ACT1_LUMTE Actin-1 293 2e-79
sp|P53458|ACT5_DIPDE Actin-5 293 2e-79
sp|P02578|ACT1_ACACA Actin-1 292 3e-79
sp|P10984|ACT2_CAEEL Actin-2 292 3e-79
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 294 bits (752), Expect = 9e-80
Identities = 143/143 (100%), Positives = 143/143 (100%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAE 429
RDLTDYLMKILTERGYSFTTTAE
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAE 206
>sp|P53464|ACTM_HELTB Actin, cytoskeletal (M)
Length = 376
Score = 294 bits (752), Expect = 9e-80
Identities = 143/143 (100%), Positives = 143/143 (100%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAE 429
RDLTDYLMKILTERGYSFTTTAE
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAE 206
>sp|P53463|ACTM_HELER Actin, cytoskeletal (M)
Length = 376
Score = 294 bits (752), Expect = 9e-80
Identities = 143/143 (100%), Positives = 143/143 (100%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAE 429
RDLTDYLMKILTERGYSFTTTAE
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAE 206
>sp|O16808|ACT_MAYDE Actin
Length = 376
Score = 293 bits (751), Expect = 1e-79
Identities = 142/143 (99%), Positives = 143/143 (100%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAE 429
RDLTDYLMKILTERGYSFTTTAE
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAE 206
>sp|P91754|ACT_LUMRU Actin
Length = 372
Score = 293 bits (749), Expect = 2e-79
Identities = 142/143 (99%), Positives = 143/143 (100%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 60 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 119
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 120 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 179
Query: 361 RDLTDYLMKILTERGYSFTTTAE 429
RDLTDYLMKILTERGYSFTTTAE
Sbjct: 180 RDLTDYLMKILTERGYSFTTTAE 202
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 293 bits (749), Expect = 2e-79
Identities = 142/143 (99%), Positives = 143/143 (100%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAE 429
RDLTDYLMKILTERGYSFTTTAE
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAE 206
>sp|P92182|ACT1_LUMTE Actin-1
Length = 376
Score = 293 bits (749), Expect = 2e-79
Identities = 142/143 (99%), Positives = 143/143 (100%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAE 429
RDLTDYLMKILTERGYSFTTTAE
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAE 206
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 293 bits (749), Expect = 2e-79
Identities = 142/143 (99%), Positives = 143/143 (100%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 59 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 118
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 119 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 178
Query: 361 RDLTDYLMKILTERGYSFTTTAE 429
RDLTDYLMKILTERGYSFTTTAE
Sbjct: 179 RDLTDYLMKILTERGYSFTTTAE 201
>sp|P02578|ACT1_ACACA Actin-1
Length = 375
Score = 292 bits (748), Expect = 3e-79
Identities = 142/143 (99%), Positives = 142/143 (99%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 63 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 361 RDLTDYLMKILTERGYSFTTTAE 429
RDLTDYLMKILTERGYSFTTTAE
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAE 205
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 292 bits (748), Expect = 3e-79
Identities = 142/143 (99%), Positives = 142/143 (99%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAE 429
RDLTDYLMKILTERGYSFTTTAE
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAE 206
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,965,138
Number of Sequences: 369166
Number of extensions: 1067903
Number of successful extensions: 3971
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3925
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3255600150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)