Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_F19
(262 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 51 9e-07
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 51 9e-07
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 51 9e-07
sp|Q9I8F9|HSP71_ORYLA Heat shock 70 kDa protein 1 (HSP70-1) 47 1e-05
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 47 2e-05
sp|P34931|HS70L_HUMAN Heat shock 70 kDa protein 1L (Heat sh... 45 4e-05
sp|P02827|HSP70_XENLA Heat shock 70 kDa protein (HSP70) 45 5e-05
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 45 5e-05
sp|P16627|HS70L_MOUSE Heat shock 70 kDa protein 1L (Heat sh... 45 5e-05
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 45 5e-05
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 50.8 bits (120), Expect = 9e-07
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = +1
Query: 4 AAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 183
A K+EF++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 587 AEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 50.8 bits (120), Expect = 9e-07
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = +1
Query: 4 AAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 183
A K+EF++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 587 AEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 50.8 bits (120), Expect = 9e-07
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = +1
Query: 4 AAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 183
A K+EF++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 587 AEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|Q9I8F9|HSP71_ORYLA Heat shock 70 kDa protein 1 (HSP70-1)
Length = 639
Score = 47.0 bits (110), Expect = 1e-05
Identities = 26/60 (43%), Positives = 31/60 (51%)
Frame = +1
Query: 4 AAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 183
A KDEF + KELEKVCNPI++K+YQ QGPT+EEVD
Sbjct: 589 ADKDEFQHKQKELEKVCNPIISKLYQ---------GGMPSGSCREQARADSQGPTIEEVD 639
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 46.6 bits (109), Expect = 2e-05
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 4 AAKDEFDYHYKELEKVCNPIMTKMYQ-----XXXXXXXXXXXXXXXXXXXXXXXXKQGPT 168
A K+E+++H KELEKVCNPI+TK+YQ GPT
Sbjct: 587 AEKEEYEHHQKELEKVCNPIITKLYQGAGGMPGGMPEGMAGGFPGAGGAAPGGGGSSGPT 646
Query: 169 VEEVD 183
+EEVD
Sbjct: 647 IEEVD 651
>sp|P34931|HS70L_HUMAN Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein 1-like)
(Heat shock 70 kDa protein 1-Hom) (HSP70-Hom)
Length = 641
Score = 45.4 bits (106), Expect = 4e-05
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = +1
Query: 4 AAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 183
A KDEFD+ KELE++CNPI+TK+YQ GPT+EEVD
Sbjct: 589 AEKDEFDHKRKELEQMCNPIITKLYQ-------GGCTGPACGTGYVPGRPATGPTIEEVD 641
>sp|P02827|HSP70_XENLA Heat shock 70 kDa protein (HSP70)
Length = 647
Score = 45.1 bits (105), Expect = 5e-05
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +1
Query: 4 AAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 183
A K+E+ + K+LEKVC PI+TK+YQ GPT+EEVD
Sbjct: 588 AEKEEYAFQQKDLEKVCQPIITKLYQGGVPGGVPGGMPGSSCGAQARQGGNSGPTIEEVD 647
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 45.1 bits (105), Expect = 5e-05
Identities = 25/60 (41%), Positives = 30/60 (50%)
Frame = +1
Query: 4 AAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 183
A KDEF++ KELE VCNPI+TK+YQ GPT+EEVD
Sbjct: 586 AEKDEFEHRQKELESVCNPIITKLYQSAGGMPGGMPGGMPGGAPGAGSTG-GGPTIEEVD 644
>sp|P16627|HS70L_MOUSE Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein 1-like)
(Heat shock 70 kDa-like protein 1) (Spermatid-specific
heat shock protein 70)
Length = 641
Score = 45.1 bits (105), Expect = 5e-05
Identities = 25/60 (41%), Positives = 30/60 (50%)
Frame = +1
Query: 4 AAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 183
A KDEFD+ KELE +CNPI+TK+YQ GPT+EEVD
Sbjct: 589 AEKDEFDHKRKELENMCNPIITKLYQ-------SGCTGPTCTPGYTPGRAATGPTIEEVD 641
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 45.1 bits (105), Expect = 5e-05
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 4 AAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQ-GPTVEEV 180
A KD++++ KELEKVCNPI+TK+YQ GPT+EEV
Sbjct: 594 AEKDQYEHKQKELEKVCNPIITKLYQAGGGMPGGMPGGMPGGMPGSGSKASSGGPTIEEV 653
Query: 181 D 183
D
Sbjct: 654 D 654
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,197,996
Number of Sequences: 369166
Number of extensions: 82714
Number of successful extensions: 384
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 68,354,980
effective HSP length: 57
effective length of database: 57,825,085
effective search space used: 1676927465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)