Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_F11
(843 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P34455|ACON_CAEEL Probable aconitate hydratase, mitochon... 420 e-117
sp|Q99KI0|ACON_MOUSE Aconitate hydratase, mitochondrial pre... 413 e-115
sp|Q9ER34|ACON_RAT Aconitate hydratase, mitochondrial precu... 413 e-115
sp|P20004|ACON_BOVIN Aconitate hydratase, mitochondrial pre... 412 e-115
sp|Q99798|ACON_HUMAN Aconitate hydratase, mitochondrial pre... 412 e-115
sp|P16276|ACON_PIG Aconitate hydratase, mitochondrial precu... 409 e-114
sp|P19414|ACON_YEAST Aconitate hydratase, mitochondrial pre... 405 e-113
sp|O13966|ACON_SCHPO Aconitate hydratase, mitochondrial pre... 401 e-111
sp|P49609|ACON_GRAVE Aconitate hydratase, mitochondrial pre... 389 e-108
sp|P39533|ACON2_YEAST Putative aconitase in PRP21-UBP12 int... 310 4e-84
>sp|P34455|ACON_CAEEL Probable aconitate hydratase, mitochondrial precursor (Citrate
hydro-lyase) (Aconitase)
Length = 777
Score = 420 bits (1080), Expect = e-117
Identities = 202/280 (72%), Positives = 233/280 (83%)
Frame = +2
Query: 2 GWPERISVGLIGSCTNSSYEDMTRAASIAKQAVDRGLRSKCAFTITPGSEQIRATIARDG 181
GWP + V LIGSCTNSSYEDMTRAASIAKQA+D+GL++K FTITPGSEQ+RATI RDG
Sbjct: 369 GWPLDVKVSLIGSCTNSSYEDMTRAASIAKQALDKGLKAKTIFTITPGSEQVRATIERDG 428
Query: 182 QAEILRQFGGIVLANACGPCIGQWDRQDVKMGEKNTIVTSYNRNFTGRNDANPATHAFVT 361
++I FGG+VLANACGPCIGQWDRQDVK GEKNTIVTSYNRNFTGRNDANPATH FVT
Sbjct: 429 LSKIFADFGGMVLANACGPCIGQWDRQDVKKGEKNTIVTSYNRNFTGRNDANPATHGFVT 488
Query: 362 SPDIVTALVIAGDLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDC 541
SPDI TA+ I+G L+FNPL DELT A G+KFKL P+G LP +G+D GE+T+Q P
Sbjct: 489 SPDITTAMAISGRLDFNPLTDELTAADGSKFKLQAPTGLDLPPKGYDPGEDTFQAP---S 545
Query: 542 GQIQVKVDPKSTRLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLD 721
G QV V P S RLQLL PF KWDGKDL DM ILIK+ GKCTTDHISAAG WLK+RGHLD
Sbjct: 546 GSGQVDVSPSSDRLQLLSPFDKWDGKDLEDMKILIKVTGKCTTDHISAAGPWLKYRGHLD 605
Query: 722 NISNNMFIGAVNSENGEVNKVRHVVTGDWSDVPSTARNYK 841
NISNN+F+ A+N++NGE+NKV++ VTG++ VP+TAR YK
Sbjct: 606 NISNNLFLTAINADNGEMNKVKNQVTGEYGAVPATARKYK 645
>sp|Q99KI0|ACON_MOUSE Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 780
Score = 413 bits (1061), Expect = e-115
Identities = 202/280 (72%), Positives = 222/280 (79%)
Frame = +2
Query: 2 GWPERISVGLIGSCTNSSYEDMTRAASIAKQAVDRGLRSKCAFTITPGSEQIRATIARDG 181
GWP I VGLIGSCTNSSYEDM R+A++AKQA+ GL+ K FTITPGSEQIRATI RDG
Sbjct: 372 GWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDG 431
Query: 182 QAEILRQFGGIVLANACGPCIGQWDRQDVKMGEKNTIVTSYNRNFTGRNDANPATHAFVT 361
A+ILR GGIVLANACGPCIGQWDR+D+K GEKNTIVTSYNRNFTGRNDANP THAFVT
Sbjct: 432 YAQILRDVGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVT 491
Query: 362 SPDIVTALVIAGDLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDC 541
SP+IVTAL IAG L FNP D LT G KFKL P D LP FD G++TYQ PP D
Sbjct: 492 SPEIVTALAIAGTLKFNPETDFLTGKDGKKFKLEAPDADELPRSDFDPGQDTYQHPPKDS 551
Query: 542 GQIQVKVDPKSTRLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLD 721
+V V P S RLQLLEPF KWDGKDL D+ ILIK+KGKCTTDHISAAG WLKFRGHLD
Sbjct: 552 SGQRVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLD 611
Query: 722 NISNNMFIGAVNSENGEVNKVRHVVTGDWSDVPSTARNYK 841
NISNN+ IGA+N ENG+ N VR+ VT ++ VP TAR YK
Sbjct: 612 NISNNLLIGAINIENGKANSVRNAVTQEFGPVPDTARYYK 651
>sp|Q9ER34|ACON_RAT Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 780
Score = 413 bits (1061), Expect = e-115
Identities = 202/280 (72%), Positives = 222/280 (79%)
Frame = +2
Query: 2 GWPERISVGLIGSCTNSSYEDMTRAASIAKQAVDRGLRSKCAFTITPGSEQIRATIARDG 181
GWP I VGLIGSCTNSSYEDM R+A++AKQA+ GL+ K FTITPGSEQIRATI RDG
Sbjct: 372 GWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDG 431
Query: 182 QAEILRQFGGIVLANACGPCIGQWDRQDVKMGEKNTIVTSYNRNFTGRNDANPATHAFVT 361
A+ILR GGIVLANACGPCIGQWDR+D+K GEKNTIVTSYNRNFTGRNDANP THAFVT
Sbjct: 432 YAQILRDVGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVT 491
Query: 362 SPDIVTALVIAGDLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDC 541
SP+IVTAL IAG L FNP D LT G KFKL P D LP FD G++TYQ PP D
Sbjct: 492 SPEIVTALAIAGTLKFNPETDFLTGKDGKKFKLEAPDADELPRSDFDPGQDTYQHPPKDS 551
Query: 542 GQIQVKVDPKSTRLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLD 721
+V V P S RLQLLEPF KWDGKDL D+ ILIK+KGKCTTDHISAAG WLKFRGHLD
Sbjct: 552 SGQRVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLD 611
Query: 722 NISNNMFIGAVNSENGEVNKVRHVVTGDWSDVPSTARNYK 841
NISNN+ IGA+N ENG+ N VR+ VT ++ VP TAR YK
Sbjct: 612 NISNNLLIGAINIENGKANSVRNAVTQEFGPVPDTARYYK 651
>sp|P20004|ACON_BOVIN Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 780
Score = 412 bits (1060), Expect = e-115
Identities = 202/280 (72%), Positives = 222/280 (79%)
Frame = +2
Query: 2 GWPERISVGLIGSCTNSSYEDMTRAASIAKQAVDRGLRSKCAFTITPGSEQIRATIARDG 181
GWP I VGLIGSCTNSSYEDM R+A++AKQA+ GL+ K FTITPGSEQIRATI RDG
Sbjct: 372 GWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLQCKSQFTITPGSEQIRATIERDG 431
Query: 182 QAEILRQFGGIVLANACGPCIGQWDRQDVKMGEKNTIVTSYNRNFTGRNDANPATHAFVT 361
A+ILR GGIVLANACGPCIGQWDR+D+K GEKNTIVTSYNRNFTGRNDANP THAFVT
Sbjct: 432 YAQILRDVGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVT 491
Query: 362 SPDIVTALVIAGDLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDC 541
SP+IVTAL IAG L FNP D LT G KFKL P D LP FD G++TYQ PP D
Sbjct: 492 SPEIVTALAIAGTLKFNPETDFLTGKDGKKFKLEAPDADELPRAEFDPGQDTYQHPPKDS 551
Query: 542 GQIQVKVDPKSTRLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLD 721
QV V P S RLQLLEPF KWDG+DL D+ ILIK+KGKCTTDHISAAG WLKFRGHLD
Sbjct: 552 SGQQVDVSPTSQRLQLLEPFDKWDGRDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLD 611
Query: 722 NISNNMFIGAVNSENGEVNKVRHVVTGDWSDVPSTARNYK 841
NISNN+ IGA+N ENG+ N VR+ VT ++ VP TAR YK
Sbjct: 612 NISNNLLIGAINVENGKANSVRNAVTQEFGPVPDTARYYK 651
>sp|Q99798|ACON_HUMAN Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 780
Score = 412 bits (1059), Expect = e-115
Identities = 201/280 (71%), Positives = 221/280 (78%)
Frame = +2
Query: 2 GWPERISVGLIGSCTNSSYEDMTRAASIAKQAVDRGLRSKCAFTITPGSEQIRATIARDG 181
GWP I VGLIGSCTNSSYEDM R+A++AKQA+ GL+ K FTITPGSEQIRATI RDG
Sbjct: 372 GWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDG 431
Query: 182 QAEILRQFGGIVLANACGPCIGQWDRQDVKMGEKNTIVTSYNRNFTGRNDANPATHAFVT 361
A+ILR GGIVLANACGPCIGQWDR+D+K GEKNTIVTSYNRNFTGRNDANP THAFVT
Sbjct: 432 YAQILRDLGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVT 491
Query: 362 SPDIVTALVIAGDLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDC 541
SP+IVTAL IAG L FNP D LT G KF+L P D LP FD G++TYQ PP D
Sbjct: 492 SPEIVTALAIAGTLKFNPETDYLTGTDGKKFRLEAPDADELPKGEFDPGQDTYQHPPKDS 551
Query: 542 GQIQVKVDPKSTRLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLD 721
V V P S RLQLLEPF KWDGKDL D+ ILIK+KGKCTTDHISAAG WLKFRGHLD
Sbjct: 552 SGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLD 611
Query: 722 NISNNMFIGAVNSENGEVNKVRHVVTGDWSDVPSTARNYK 841
NISNN+ IGA+N ENG+ N VR+ VT ++ VP TAR YK
Sbjct: 612 NISNNLLIGAINIENGKANSVRNAVTQEFGPVPDTARYYK 651
>sp|P16276|ACON_PIG Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 781
Score = 409 bits (1051), Expect = e-114
Identities = 200/280 (71%), Positives = 221/280 (78%)
Frame = +2
Query: 2 GWPERISVGLIGSCTNSSYEDMTRAASIAKQAVDRGLRSKCAFTITPGSEQIRATIARDG 181
GWP I VGLIGSCTNSSYEDM R+A++AKQA+ GL+ K FTITPGSEQIRATI RDG
Sbjct: 372 GWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDG 431
Query: 182 QAEILRQFGGIVLANACGPCIGQWDRQDVKMGEKNTIVTSYNRNFTGRNDANPATHAFVT 361
A++LR GGIVLANACGPCIGQWDR+D+K GEKNTIVTSYNRNFTGRNDANP THAFVT
Sbjct: 432 YAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVT 491
Query: 362 SPDIVTALVIAGDLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDC 541
SP+IVTAL IAG L FNP D LT G KFKL P D LP FD G++TYQ PP D
Sbjct: 492 SPEIVTALAIAGTLKFNPETDFLTGKDGKKFKLEAPDADELPRAEFDPGQDTYQHPPKDS 551
Query: 542 GQIQVKVDPKSTRLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLD 721
+V V P S RLQLLEPF KWDGKDL D+ ILIK+KGKCTTDHISAAG WLKFRGHLD
Sbjct: 552 SGQRVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLD 611
Query: 722 NISNNMFIGAVNSENGEVNKVRHVVTGDWSDVPSTARNYK 841
NISNN+ IGA+N EN + N VR+ VT ++ VP TAR YK
Sbjct: 612 NISNNLLIGAINIENRKANSVRNAVTQEFGPVPDTARYYK 651
>sp|P19414|ACON_YEAST Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 778
Score = 405 bits (1041), Expect = e-113
Identities = 191/279 (68%), Positives = 221/279 (79%)
Frame = +2
Query: 5 WPERISVGLIGSCTNSSYEDMTRAASIAKQAVDRGLRSKCAFTITPGSEQIRATIARDGQ 184
WP + VGLIGSCTNSSYEDM+R+ASI K A GL+SK FT+TPGSEQIRATI RDGQ
Sbjct: 370 WPLDVRVGLIGSCTNSSYEDMSRSASIVKDAAAHGLKSKTIFTVTPGSEQIRATIERDGQ 429
Query: 185 AEILRQFGGIVLANACGPCIGQWDRQDVKMGEKNTIVTSYNRNFTGRNDANPATHAFVTS 364
E ++FGGIVLANACGPCIGQWDR+D+K G+KNTIV+SYNRNFT RND NP THAFV S
Sbjct: 430 LETFKEFGGIVLANACGPCIGQWDRRDIKKGDKNTIVSSYNRNFTSRNDGNPQTHAFVAS 489
Query: 365 PDIVTALVIAGDLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDCG 544
P++VTA IAGDL FNPL D+L D GN+F L PP GD LP RG+DAGENTYQ PP D
Sbjct: 490 PELVTAFAIAGDLRFNPLTDKLKDKDGNEFMLKPPHGDGLPQRGYDAGENTYQAPPADRS 549
Query: 545 QIQVKVDPKSTRLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLDN 724
++VKV P S RLQLL+PF WDGKD DM ILIK GK TTDHIS AG WLK+RGHL+N
Sbjct: 550 TVEVKVSPTSDRLQLLKPFKPWDGKDAKDMPILIKAVGKTTTDHISMAGPWLKYRGHLEN 609
Query: 725 ISNNMFIGAVNSENGEVNKVRHVVTGDWSDVPSTARNYK 841
ISNN IGA+N+EN + N V++V TG++ VP TAR+Y+
Sbjct: 610 ISNNYMIGAINAENKKANCVKNVYTGEYKGVPDTARDYR 648
>sp|O13966|ACON_SCHPO Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 778
Score = 401 bits (1030), Expect = e-111
Identities = 188/279 (67%), Positives = 224/279 (80%)
Frame = +2
Query: 5 WPERISVGLIGSCTNSSYEDMTRAASIAKQAVDRGLRSKCAFTITPGSEQIRATIARDGQ 184
WP+ + VGLIGSCTNSSYEDM+RAASI +QA+D+G+++K FTITPGSEQ+RAT+ RDGQ
Sbjct: 369 WPQELKVGLIGSCTNSSYEDMSRAASICQQAIDKGIKTKSLFTITPGSEQVRATLTRDGQ 428
Query: 185 AEILRQFGGIVLANACGPCIGQWDRQDVKMGEKNTIVTSYNRNFTGRNDANPATHAFVTS 364
+ +R+ GGIVLANACGPCIGQW R DVK GEKN+IVTSYNRNFTGRNDANPATHAFVTS
Sbjct: 429 LDTMRKAGGIVLANACGPCIGQWKRTDVKKGEKNSIVTSYNRNFTGRNDANPATHAFVTS 488
Query: 365 PDIVTALVIAGDLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDCG 544
PDIVTA+V +GD+NFNPL D L D GN FK PP+G LPS+G+D G NTY P+
Sbjct: 489 PDIVTAMVFSGDMNFNPLTDTLKDKDGNDFKFEPPTGAGLPSKGYDPGSNTY-VAPSSVN 547
Query: 545 QIQVKVDPKSTRLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLDN 724
V +DP S RLQ L PF KWDGKD+ + ILIK KGKCTTDHISAAG WLK+RGHL N
Sbjct: 548 VKDVAIDPHSKRLQRLTPFKKWDGKDMKGLKILIKAKGKCTTDHISAAGPWLKYRGHLQN 607
Query: 725 ISNNMFIGAVNSENGEVNKVRHVVTGDWSDVPSTARNYK 841
ISNN IGA+N+ENGE NK++ +TG++ VP+ A +Y+
Sbjct: 608 ISNNYMIGAINAENGEANKLKDQLTGEYKTVPNVAIDYR 646
>sp|P49609|ACON_GRAVE Aconitate hydratase, mitochondrial precursor (Citrate hydro-lyase)
(Aconitase)
Length = 779
Score = 389 bits (998), Expect = e-108
Identities = 182/280 (65%), Positives = 214/280 (76%)
Frame = +2
Query: 2 GWPERISVGLIGSCTNSSYEDMTRAASIAKQAVDRGLRSKCAFTITPGSEQIRATIARDG 181
GWP ++VGLIGSCTNSSYEDM R+AS+ KQA+ G++SK F ITPGSEQ+RATI+RDG
Sbjct: 370 GWPAELTVGLIGSCTNSSYEDMARSASVVKQALSHGVKSKSIFNITPGSEQVRATISRDG 429
Query: 182 QAEILRQFGGIVLANACGPCIGQWDRQDVKMGEKNTIVTSYNRNFTGRNDANPATHAFVT 361
+ + GG VLANACGPCIGQW+R DV G N+I+TS+NRNF+ RND NP THAFV
Sbjct: 430 ILDTFTEAGGTVLANACGPCIGQWNRSDVPKGTPNSIITSFNRNFSQRNDGNPQTHAFVA 489
Query: 362 SPDIVTALVIAGDLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTYQKPPTDC 541
SP+IVTA+ +AG L FNP D L A G +FKL+ PSGD LP GFD GE+T+Q P D
Sbjct: 490 SPEIVTAMSLAGSLKFNPATDSLQGADGAEFKLAAPSGDELPVMGFDPGEDTFQPPSDDS 549
Query: 542 GQIQVKVDPKSTRLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRGHLD 721
I V++DP S RL LEPFP WDGKD DM +LIK +GKCTTDHIS AG WLKFRGHLD
Sbjct: 550 TSILVQIDPDSQRLSFLEPFPAWDGKDYTDMPVLIKARGKCTTDHISMAGPWLKFRGHLD 609
Query: 722 NISNNMFIGAVNSENGEVNKVRHVVTGDWSDVPSTARNYK 841
NISNNM IGAVN ENGE+N V++ VTG++ VP TAR YK
Sbjct: 610 NISNNMLIGAVNDENGEINNVKNAVTGEYGTVPDTARAYK 649
>sp|P39533|ACON2_YEAST Putative aconitase in PRP21-UBP12 intergenic region
Length = 789
Score = 310 bits (793), Expect = 4e-84
Identities = 153/283 (54%), Positives = 194/283 (68%), Gaps = 4/283 (1%)
Frame = +2
Query: 5 WPERISVGLIGSCTNSSYEDMTRAASIAKQAVDRGLRSKCAFTITPGSEQIRATIARDGQ 184
WP+++S GLIGSCTNSSY+DM+R + KQA GL+ + F +TPGSEQIRAT+ RDG
Sbjct: 373 WPQKVSAGLIGSCTNSSYQDMSRVVDLVKQASKAGLKPRIPFFVTPGSEQIRATLERDGI 432
Query: 185 AEILRQFGGIVLANACGPCIGQWDRQDVKMGEK--NTIVTSYNRNFTGRNDANPATHAFV 358
+I ++ G VLANACGPCIGQW+R+DV K NTI TS+NRNF RND N T F+
Sbjct: 433 IDIFQENGAKVLANACGPCIGQWNREDVSKTSKETNTIFTSFNRNFRARNDGNRNTMNFL 492
Query: 359 TSPDIVTALVIAGDLNFNPLVDELTDAKGNKFKLSPPSGDTLPSRGFDAGENTY--QKPP 532
TSP+IVTA+ +GD FNPL D + G FK PP GD LP RGF+ G + + + P
Sbjct: 493 TSPEIVTAMSYSGDAQFNPLTDSIKLPNGKDFKFQPPKGDELPKRGFEHGRDKFYPEMDP 552
Query: 533 TDCGQIQVKVDPKSTRLQLLEPFPKWDGKDLIDMAILIKIKGKCTTDHISAAGKWLKFRG 712
+++KVDP S RLQLLEPF W+GK+L +L+K++GKCTTDHISAAG WLK++G
Sbjct: 553 KPDSNVEIKVDPNSDRLQLLEPFKPWNGKEL-KTNVLLKVEGKCTTDHISAAGVWLKYKG 611
Query: 713 HLDNISNNMFIGAVNSENGEVNKVRHVVTGDWSDVPSTARNYK 841
HL+NIS N IGA N E GEVNK + + G D+P +K
Sbjct: 612 HLENISYNTLIGAQNKETGEVNKA-YDLDGTEYDIPGLMMKWK 653
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,040,850
Number of Sequences: 369166
Number of extensions: 2164653
Number of successful extensions: 6443
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6241
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8245425915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)