Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_D24
(863 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P43883|ADFP_MOUSE Adipophilin (Adipose differentiation-r... 39 0.014
sp|P19269|AMY1_DEBOC Alpha-amylase 1 precursor (1,4-alpha-D... 32 1.8
sp|Q00496|BXE_CLOBO Botulinum neurotoxin type E precursor (... 32 3.0
sp|P55737|HSP82_ARATH Heat shock protein 81-2 (HSP81-2) 32 3.0
sp|P51818|HSP83_ARATH Heat shock protein 81-3 (HSP81-3) (HS... 32 3.0
sp|Q8AYI2|PRGR_RANDY Progesterone receptor (PR) (dyPR) 32 3.0
sp|P57498|CYSN_BUCAI Sulfate adenylyltransferase subunit 1 ... 32 3.0
sp|P03589|V125_AMVLE 125 kDa protein 31 3.9
sp|P30995|BXE_CLOBU Botulinum neurotoxin type E precursor (... 31 3.9
sp|Q8K908|AMIB_BUCAP Putative N-acetylmuramoyl-L-alanine am... 31 3.9
>sp|P43883|ADFP_MOUSE Adipophilin (Adipose differentiation-related protein) (ADRP)
Length = 425
Score = 39.3 bits (90), Expect = 0.014
Identities = 56/273 (20%), Positives = 114/273 (41%), Gaps = 12/273 (4%)
Frame = +1
Query: 34 SNLKIVKDMVEPIAASKLGSVDNFACNQLDKLETKYPXXXXXXXXXXXXXGEYYDSSIKP 213
S L I++ + IA + + +AC LD++E + P +
Sbjct: 64 SALPIIQKLEPQIAVA-----NTYACKGLDRMEERLPI-------------------LNQ 99
Query: 214 NVDKMIAAKDSAVYIAKTPFRITGQTIEFLSNTTNSFVHRFMSKDKKAEYGAVEKKEYDI 393
+++A+ AV AK + T+ ++ S V + K K A G+VE+ +
Sbjct: 100 PTSEIVASARGAVTGAKD---VVTTTMAGAKDSVASTVSGVVDKTKGAVTGSVERTK--- 153
Query: 394 LYRRALKEVNTILTFTLKNIEGLSNVLNSIYDQSVTKNKEWLHGYY----EEFTDEMKKN 561
+++ ++ + G+ +NS D ++TK++ + Y+ EE E KK
Sbjct: 154 ----------SVVNGSINTVLGMVQFMNSGVDNAITKSEMLVDQYFPLTQEELEMEAKKV 203
Query: 562 SGDESKTESTVMQLAQNFSNKL--RVSVRAMSTVCYNHMSSGNKETLDLMFNKTEHIYST 735
G + + + + ++ S KL R +A+S V ++ET+ + T H+
Sbjct: 204 EGFDMVQKPSNYERLESLSTKLCSRAYHQALSRV--KEAKQKSQETIS-QLHSTVHLIEF 260
Query: 736 LSKSTY------QEIRDQISIENIKWIGQNSIG 816
K+ + Q +D++ + ++W + SIG
Sbjct: 261 ARKNMHSANQKIQGAQDKLYVSWVEW--KRSIG 291
>sp|P19269|AMY1_DEBOC Alpha-amylase 1 precursor (1,4-alpha-D-glucan glucanohydrolase 1)
Length = 512
Score = 32.3 bits (72), Expect = 1.8
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +1
Query: 520 HGYYEEFTDEMKKNSGDESKTESTVMQLAQNFSNKLRVSVRAMSTVCYNHMS-SGNKETL 696
HGY+ + DE+ N G T + QLA ++ S+ M V YNH + +G+ ++
Sbjct: 116 HGYWMKNIDELNTNFG----TADELKQLASELHSR---SMLLMVDVVYNHYAWNGDGSSV 168
Query: 697 DLM----FNKTEHIYSTLSKSTYQEIRDQISIENIKWIGQNSIGL 819
D FN+ + + + Y DQ ++E+ W G + L
Sbjct: 169 DYSSFTPFNQQSYFHDYCLITNY---NDQTNVEDC-WEGDTEVSL 209
>sp|Q00496|BXE_CLOBO Botulinum neurotoxin type E precursor (BoNT/E) (Bontoxilysin E)
[Contains: Botulinum neurotoxin E light chain; Botulinum
neurotoxin E heavy chain]
Length = 1251
Score = 31.6 bits (70), Expect = 3.0
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Frame = +1
Query: 418 VNTILTFTLKNIEGLSN----VLNSIYDQSVTKNKEWLHGYYEEFTDEMKKNSGDESKTE 585
+ TIL FT+K+ G S+ V+ +I + ++++W Y ++ M K + +K +
Sbjct: 642 IPTILVFTIKSFLGSSDNKNKVIKAINNALKERDEKWKEVYSFIVSNWMTKINTQFNKRK 701
Query: 586 STVMQLAQNFSNKLRVSVRAMSTVCYNHMSSGNKETLDLMFNKTEHIYSTLSKSTYQEIR 765
+ Q QN V A+ T+ + +S E + + NK + K E+
Sbjct: 702 EQMYQALQN-------QVNAIKTIIESKYNSYTLEEKNELTNKYD------IKQIENELN 748
Query: 766 DQISI--ENI-KWIGQNSIGLLSNI 831
++SI NI +++ ++SI L I
Sbjct: 749 QKVSIAMNNIDRFLTESSISYLMKI 773
>sp|P55737|HSP82_ARATH Heat shock protein 81-2 (HSP81-2)
Length = 699
Score = 31.6 bits (70), Expect = 3.0
Identities = 20/87 (22%), Positives = 42/87 (48%)
Frame = +1
Query: 364 GAVEKKEYDILYRRALKEVNTILTFTLKNIEGLSNVLNSIYDQSVTKNKEWLHGYYEEFT 543
G V+ ++ + R + N IL KN+ + L ++ + +NKE + +YE F+
Sbjct: 358 GIVDSEDLPLNISRETLQQNKILKVIRKNL--VKKCLELFFE--IAENKEDYNKFYEAFS 413
Query: 544 DEMKKNSGDESKTESTVMQLAQNFSNK 624
+K ++S+ + + +L + S K
Sbjct: 414 KNLKLGIHEDSQNRTKIAELLRYHSTK 440
>sp|P51818|HSP83_ARATH Heat shock protein 81-3 (HSP81-3) (HSP81.2)
Length = 699
Score = 31.6 bits (70), Expect = 3.0
Identities = 20/87 (22%), Positives = 42/87 (48%)
Frame = +1
Query: 364 GAVEKKEYDILYRRALKEVNTILTFTLKNIEGLSNVLNSIYDQSVTKNKEWLHGYYEEFT 543
G V+ ++ + R + N IL KN+ + L ++ + +NKE + +YE F+
Sbjct: 358 GIVDSEDLPLNISRETLQQNKILKVIRKNL--VKKCLELFFE--IAENKEDYNKFYEAFS 413
Query: 544 DEMKKNSGDESKTESTVMQLAQNFSNK 624
+K ++S+ + + +L + S K
Sbjct: 414 KNLKLGIHEDSQNRTKIAELLRYHSTK 440
>sp|Q8AYI2|PRGR_RANDY Progesterone receptor (PR) (dyPR)
Length = 711
Score = 31.6 bits (70), Expect = 3.0
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 638 SEPCQPCAIITCLRETRKRWILCSIKPSISTPPYQNQHI 754
++P P A++ L + +R +LC +K S S P ++N HI
Sbjct: 484 TKPETPSALLCSLNQLCERQLLCVVKWSKSLPGFRNMHI 522
>sp|P57498|CYSN_BUCAI Sulfate adenylyltransferase subunit 1 (Sulfate adenylate
transferase) (SAT) (ATP-sulfurylase large subunit)
Length = 473
Score = 31.6 bits (70), Expect = 3.0
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Frame = +1
Query: 283 GQTIEFLSNTTNSFVHRFMSKD---KKAEYG----AVEKKEYDILYRRALKEVNTILTFT 441
GQTI+ L NS V R ++ D KKAE G V K E DI +++IL +
Sbjct: 269 GQTIKILPENINSRVSRIVTFDKELKKAEIGESITVVLKDEIDINRGDFFVNIDSILQPS 328
Query: 442 LKNIEGL----SNVLNSIYDQSVTKNKEWLHGYYEEFTDEMKKNSGDESKTESTVMQLAQ 609
+ I + N+L + +V + + + Y +E ++ N+ + K+ S V+
Sbjct: 329 QEAIIDIVWMTDNILLAGESYNVKLSGKKIRVYIKEILFKLDVNTLKKVKSHSLVL---- 384
Query: 610 NFSNKLRVSVRAMSTVCYNHMS----SGNKETLDLMFNKT 717
++ RV + V +++ S +GN +DL+ N T
Sbjct: 385 --NSIGRVKIYFSKPVIFDNYSENRMTGNMIFIDLLTNIT 422
>sp|P03589|V125_AMVLE 125 kDa protein
Length = 1126
Score = 31.2 bits (69), Expect = 3.9
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Frame = +1
Query: 394 LYRRALKEVNTILTFTLKNIEGLSNVLNS-IYDQSV--TKNKEWLHG-------YYEEFT 543
LY+ K++ T+ +F L I+G S +++ +Y QS+ EW G Y
Sbjct: 556 LYQSFQKKIETVFSFILGKIDGPSPLISDPVYFQSLEDVYYAEWHQGNAIDASNYARTLL 615
Query: 544 DEMKKNSGDESKTESTVMQLAQNFSNKLRVSVRAMSTVCYNHMSSGNKETLDL 702
D+++K + K ++ ++ AQ KL ++ + H G E L L
Sbjct: 616 DDIRKQKEESLKAKAKEVEDAQ----KLNRAILQVHAYLEAHPDGGKIEGLGL 664
>sp|P30995|BXE_CLOBU Botulinum neurotoxin type E precursor (BoNT/E) (Bontoxilysin E)
[Contains: Botulinum neurotoxin E light chain; Botulinum
neurotoxin E heavy chain]
Length = 1251
Score = 31.2 bits (69), Expect = 3.9
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Frame = +1
Query: 418 VNTILTFTLKNIEGLSN----VLNSIYDQSVTKNKEWLHGYYEEFTDEMKKNSGDESKTE 585
+ TIL FT+K+ G S+ V+ +I + ++++W Y ++ M K + +K +
Sbjct: 642 IPTILVFTIKSFLGSSDNKNKVIKAINNALKERDEKWKEVYSFIVSNWMTKINTQFNKRK 701
Query: 586 STVMQLAQNFSNKLRVSVRAMSTVCYNHMSSGNKETLDLMFNKTEHIYSTLSKSTYQEIR 765
+ Q QN N L+ + + YN + K L ++ E I + L++
Sbjct: 702 EQMYQALQNQVNALKAIIESK----YNSYTLEEKNELTNKYD-IEQIENELNQKV----- 751
Query: 766 DQISIENI-KWIGQNSIGLLSNI 831
I++ NI +++ ++SI L +
Sbjct: 752 -SIAMNNIDRFLTESSISYLMKL 773
>sp|Q8K908|AMIB_BUCAP Putative N-acetylmuramoyl-L-alanine amidase
Length = 233
Score = 31.2 bits (69), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 685 KETLDLMFNKTEHIYSTLSKSTYQEIRDQISIENIKWIGQNSIGLLSNI 831
K LDL FN + + LS+ +Q+++ I ++ I + S+G+LS+I
Sbjct: 133 KTVLDLQFNNFQKMEINLSRYIFQQLKKIIKLDKIN-LNYASLGILSSI 180
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.315 0.129 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,454,335
Number of Sequences: 369166
Number of extensions: 1888793
Number of successful extensions: 5285
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5281
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)