Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_C21
(727 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammon... 378 e-104
sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammon... 370 e-102
sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammon... 368 e-101
sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammon... 368 e-101
sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammon... 367 e-101
sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammon... 366 e-101
sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia... 365 e-101
sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia... 365 e-101
sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammon... 359 5e-99
sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (... 357 1e-98
>sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammonia ligase)
Length = 361
Score = 378 bits (970), Expect = e-104
Identities = 169/242 (69%), Positives = 197/242 (81%)
Frame = +1
Query: 1 KTRTLNFVPVKPKDVPIWNFDGSSTGQAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETY 180
KTRTLNF P P ++PIWNFDGSSTGQAE SNSD+YL+PVA++ DPFR +NK+VLCETY
Sbjct: 40 KTRTLNFTPKSPSELPIWNFDGSSTGQAERSNSDVYLYPVAVYRDPFRLGNNKLVLCETY 99
Query: 181 TYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYY 360
Y++ P D+N R C E M A D HPWFG+EQEYTLLDID +P WPK G+PG QGPYY
Sbjct: 100 KYNKKPADTNQRWKCMEVMTRAADQHPWFGMEQEYTLLDIDKHPLGWPKNGYPGPQGPYY 159
Query: 361 CGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMAR 540
CGVG N+V+GRD++EAHY+ACL AGI I+G NA+VMPAQWEFQ+GPCEGI + D LWMAR
Sbjct: 160 CGVGANRVYGRDVVEAHYRACLCAGINISGENAKVMPAQWEFQVGPCEGITMGDDLWMAR 219
Query: 541 YLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHH 720
YLLHRVAEDF VVV+ DPKPI GDWNGAG HTN+ST MR P GI IE AI+K+SK H
Sbjct: 220 YLLHRVAEDFDVVVTLDPKPIPGDWNGAGMHTNFSTEAMRGPNGILEIESAIDKLSKVHE 279
Query: 721 EH 726
+H
Sbjct: 280 KH 281
>sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 370 bits (949), Expect = e-102
Identities = 163/242 (67%), Positives = 194/242 (80%)
Frame = +1
Query: 1 KTRTLNFVPVKPKDVPIWNFDGSSTGQAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETY 180
KTRTL+ P +D+P WNFDGSST QAEGSNSD+YL P A+F DPFR NK+VLCE +
Sbjct: 43 KTRTLDHEPKSLEDLPEWNFDGSSTFQAEGSNSDMYLRPAAMFRDPFRKDPNKLVLCEVF 102
Query: 181 TYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYY 360
Y++ D+NLRH+C M + HPWFG+EQEYTLL D +PF WP FPG QGPYY
Sbjct: 103 KYNRQSADTNLRHTCRRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYY 162
Query: 361 CGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMAR 540
CGVG +K +GRDI+EAHY+ACL+AG+KI GTNAEVMPAQWEFQ+GPCEGI + DHLW+AR
Sbjct: 163 CGVGADKAYGRDIVEAHYRACLYAGVKIGGTNAEVMPAQWEFQVGPCEGIEMGDHLWIAR 222
Query: 541 YLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHH 720
++LHRV EDFGV+VSFDPKPI G+WNGAG HTN+ST MR GG+K+IEEAIEK+SKRH
Sbjct: 223 FILHRVCEDFGVIVSFDPKPIPGNWNGAGCHTNFSTKNMREDGGLKHIEEAIEKLSKRHQ 282
Query: 721 EH 726
H
Sbjct: 283 YH 284
>sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 368 bits (944), Expect = e-101
Identities = 160/242 (66%), Positives = 196/242 (80%)
Frame = +1
Query: 1 KTRTLNFVPVKPKDVPIWNFDGSSTGQAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETY 180
KTRTL+ P +++P WNFDGSST Q+EGSNSD+YL PVA+F DPFR + NK+V CE +
Sbjct: 43 KTRTLDCEPKCVEELPEWNFDGSSTFQSEGSNSDMYLSPVAMFRDPFRKEPNKLVFCEVF 102
Query: 181 TYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYY 360
Y++ P ++NLRHSC+ M + HPWFG+EQEYTL+ D +PF WP GFPG QGPYY
Sbjct: 103 KYNRKPAETNLRHSCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYY 162
Query: 361 CGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMAR 540
CGVG +K +GRDI+EAHY+ACL+AG+KI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR
Sbjct: 163 CGVGADKAYGRDIVEAHYRACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVAR 222
Query: 541 YLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHH 720
++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+ST MR G+KYIEEAI+K+SKRH
Sbjct: 223 FILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIDKLSKRHQ 282
Query: 721 EH 726
H
Sbjct: 283 YH 284
>sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 368 bits (944), Expect = e-101
Identities = 160/242 (66%), Positives = 196/242 (80%)
Frame = +1
Query: 1 KTRTLNFVPVKPKDVPIWNFDGSSTGQAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETY 180
KTRTL+ P +++P WNFDGSST Q+EGSNSD+YLHPVA+F DPFR NK+VLCE +
Sbjct: 43 KTRTLDCEPKCVEELPEWNFDGSSTFQSEGSNSDMYLHPVAMFRDPFRRDPNKLVLCEVF 102
Query: 181 TYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYY 360
Y++ P ++NLRH C+ M + HPWFG+EQEYTL+ D +PF WP GFPG QGPYY
Sbjct: 103 KYNRKPAETNLRHICKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYY 162
Query: 361 CGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMAR 540
CGVG +K +GRDI+EAHY+ACL+AG+KI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR
Sbjct: 163 CGVGADKAYGRDIVEAHYRACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWIAR 222
Query: 541 YLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHH 720
++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+ST MR G+K+IEEAI+K+SKRH
Sbjct: 223 FILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKWIEEAIDKLSKRHQ 282
Query: 721 EH 726
H
Sbjct: 283 YH 284
>sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 367 bits (941), Expect = e-101
Identities = 160/242 (66%), Positives = 197/242 (81%)
Frame = +1
Query: 1 KTRTLNFVPVKPKDVPIWNFDGSSTGQAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETY 180
KTRTL+ P +++P WNFDGSST Q+EGSNSD+YL P A+F DPFR NK+VLCE +
Sbjct: 43 KTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCEVF 102
Query: 181 TYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYY 360
Y++ P ++NLRH+C+ M + HPWFG+EQEYTL+ D +PF WP GFPG QGPYY
Sbjct: 103 KYNRRPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYY 162
Query: 361 CGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMAR 540
CGVG ++ +GRDI+EAHY+ACL+AG+KIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR
Sbjct: 163 CGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVAR 222
Query: 541 YLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHH 720
++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+ST MR G+KYIEEAIEK+SKRH
Sbjct: 223 FILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQ 282
Query: 721 EH 726
H
Sbjct: 283 YH 284
>sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 366 bits (940), Expect = e-101
Identities = 160/242 (66%), Positives = 196/242 (80%)
Frame = +1
Query: 1 KTRTLNFVPVKPKDVPIWNFDGSSTGQAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETY 180
KTRTL+ P +++P WNFDGSST Q+EGSNSD+YL P A+F DPFR NK+V CE +
Sbjct: 43 KTRTLDSEPKGVEELPEWNFDGSSTFQSEGSNSDMYLVPAAMFRDPFRKDPNKLVFCEVF 102
Query: 181 TYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYY 360
Y++ P ++NLRH+C+ M + HPWFG+EQEYTL+ D +PF WP GFPG QGPYY
Sbjct: 103 KYNRKPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYY 162
Query: 361 CGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMAR 540
CGVG +K +GRDI+EAHY+ACL+AGIKIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR
Sbjct: 163 CGVGADKAYGRDIVEAHYRACLYAGIKIAGTNAEVMPAQWEFQIGPCEGIDMGDHLWVAR 222
Query: 541 YLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHH 720
++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+ST MR G+KYIEE+IEK+SKRH
Sbjct: 223 FILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEESIEKLSKRHQ 282
Query: 721 EH 726
H
Sbjct: 283 YH 284
>sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 365 bits (938), Expect = e-101
Identities = 160/242 (66%), Positives = 194/242 (80%)
Frame = +1
Query: 1 KTRTLNFVPVKPKDVPIWNFDGSSTGQAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETY 180
KTRTL+ P +++P WNFDGSST Q+EGSNSD+YLHPVA+F DPFR NK+V CE +
Sbjct: 43 KTRTLDCDPKCVEELPEWNFDGSSTFQSEGSNSDMYLHPVAMFRDPFRRDPNKLVFCEVF 102
Query: 181 TYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYY 360
Y++ P ++NLRHSC+ M HPWFG+EQEYTL+ D +PF WP GFPG QGPYY
Sbjct: 103 KYNRKPAETNLRHSCKRIMDMVSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYY 162
Query: 361 CGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMAR 540
CGVG +K +GRDI+EAHY+ACL+AGIKI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR
Sbjct: 163 CGVGADKAYGRDIVEAHYRACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVAR 222
Query: 541 YLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHH 720
++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+ST MR G++ IEEAI+K+SKRH
Sbjct: 223 FILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLRCIEEAIDKLSKRHQ 282
Query: 721 EH 726
H
Sbjct: 283 YH 284
>sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 365 bits (937), Expect = e-101
Identities = 160/242 (66%), Positives = 195/242 (80%)
Frame = +1
Query: 1 KTRTLNFVPVKPKDVPIWNFDGSSTGQAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETY 180
KTRTL+ P +++P WNFDGSST Q+EGSNSD+YL P A+F DPFR NK+V CE +
Sbjct: 43 KTRTLDSEPKCIEELPEWNFDGSSTFQSEGSNSDMYLVPAAMFRDPFRKDPNKLVFCEVF 102
Query: 181 TYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYY 360
Y++ P ++NLRH+C+ M + HPWFG+EQEYTL+ D +PF WP GFPG QGPYY
Sbjct: 103 KYNRKPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYY 162
Query: 361 CGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMAR 540
CGVG +K +GRDI+EAHY+ACL+AGIKI GTNAEVMPAQWEFQIGPCEGI++ DHLW+AR
Sbjct: 163 CGVGADKAYGRDIVEAHYRACLYAGIKIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVAR 222
Query: 541 YLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHH 720
++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+ST MR G+KYIEEAIEK+SKRH
Sbjct: 223 FILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQ 282
Query: 721 EH 726
H
Sbjct: 283 YH 284
>sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 374
Score = 359 bits (921), Expect = 5e-99
Identities = 159/243 (65%), Positives = 196/243 (80%), Gaps = 1/243 (0%)
Frame = +1
Query: 1 KTRTLNFVPVKPKDVPIWNFDGSSTGQAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETY 180
KTRTL+ P +++P WNFDGSST Q+EGSNSD+YL P A+F DPFR NK+VLCE++
Sbjct: 43 KTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCESF 102
Query: 181 TYD-QTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPY 357
+ P ++NLRH+C+ M + HPWFG+EQEYTL+ D +PF WP GFPG QGPY
Sbjct: 103 QVQFEGPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPY 162
Query: 358 YCGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMA 537
YCGVG ++ +GRDI+EAHY+ACL+AG+KIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+A
Sbjct: 163 YCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVA 222
Query: 538 RYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRH 717
R++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+ST MR G+KYIEEAIEK+SKRH
Sbjct: 223 RFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRH 282
Query: 718 HEH 726
H
Sbjct: 283 QYH 285
>sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (Glutamate--ammonia ligase 2)
Length = 369
Score = 357 bits (917), Expect = 1e-98
Identities = 155/242 (64%), Positives = 193/242 (79%)
Frame = +1
Query: 1 KTRTLNFVPVKPKDVPIWNFDGSSTGQAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETY 180
K RTL+F+P PK++P+WN+DGSS QAEGSNSD YL+PVA++ DPFR +N +V+C+TY
Sbjct: 49 KDRTLDFIPQSPKELPVWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNNILVMCDTY 108
Query: 181 TYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYY 360
+D TP D+N R +C E PWFGIEQEYT LD D +P WPK GFPG QGPYY
Sbjct: 109 KFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQEYTFLDFDGHPLGWPKNGFPGPQGPYY 168
Query: 361 CGVGCNKVFGRDIIEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMAR 540
CGVG NKV+ RDI++AHY+ACL+AGIK++GTNAEVMPAQWEFQ+GPCEGI++ D LWMAR
Sbjct: 169 CGVGANKVYARDIVDAHYRACLYAGIKVSGTNAEVMPAQWEFQVGPCEGISIGDDLWMAR 228
Query: 541 YLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHH 720
+LLHR++E+FG+V + DPKP+ GDWNGAGAHTN ST MR GGI+ IE+A+ K+SK H
Sbjct: 229 FLLHRISEEFGIVSTLDPKPMPGDWNGAGAHTNVSTKAMREDGGIRDIEKAVAKLSKCHE 288
Query: 721 EH 726
H
Sbjct: 289 RH 290
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,924,259
Number of Sequences: 369166
Number of extensions: 1988038
Number of successful extensions: 5351
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5244
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6510836890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)