Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_C15
(707 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P23348|B3A3_RAT Anion exchange protein 3 (Neuronal band ... 51 3e-06
sp|P16283|B3A3_MOUSE Anion exchange protein 3 (Neuronal ban... 49 1e-05
sp|P02730|B3AT_HUMAN Band 3 anion transport protein (Anion ... 49 1e-05
sp|Q9GKY1|B3A4_RABIT Anion exchange protein 4 (Anion exchan... 49 1e-05
sp|Q96Q91|B3A4_HUMAN Anion exchange protein 4 (Anion exchan... 49 2e-05
sp|P48751|B3A3_HUMAN Anion exchange protein 3 (Neuronal ban... 49 2e-05
sp|P32847|B3AT_ONCMY Band 3 anion exchange protein (Solute ... 48 3e-05
sp|P04919|B3AT_MOUSE Band 3 anion transport protein (Anion ... 48 3e-05
sp|P23562|B3AT_RAT Band 3 anion transport protein (Anion ex... 47 4e-05
sp|P48746|B3A2_RABIT Anion exchange protein 2 (Non-erythroi... 47 5e-05
>sp|P23348|B3A3_RAT Anion exchange protein 3 (Neuronal band 3-like protein) (Solute
carrier family 4 member 3)
Length = 1227
Score = 51.2 bits (121), Expect = 3e-06
Identities = 23/77 (29%), Positives = 45/77 (58%)
Frame = +2
Query: 2 VLIEPLLNYIPTSAMLGMFLYMGVMGIRDLVVTRRLIVMFKRQKHWKDHEYLRDIPPSVM 181
+++ +L IP + + G+FLYMGV + + +++RL+++F KH + Y+ + M
Sbjct: 1091 IVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIFMPAKHHPEQPYVTKVKTWRM 1150
Query: 182 KTFEILQLGMIILMFAM 232
F +QLG I L++ +
Sbjct: 1151 HLFTFIQLGCIALLWVV 1167
>sp|P16283|B3A3_MOUSE Anion exchange protein 3 (Neuronal band 3-like protein) (Solute
carrier family 4 member 3)
Length = 1227
Score = 49.3 bits (116), Expect = 1e-05
Identities = 22/77 (28%), Positives = 45/77 (58%)
Frame = +2
Query: 2 VLIEPLLNYIPTSAMLGMFLYMGVMGIRDLVVTRRLIVMFKRQKHWKDHEYLRDIPPSVM 181
+++ +L IP + + G+FLYMGV + + +++RL+++F KH + Y+ + +
Sbjct: 1091 IVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIFMPAKHHPEQPYVTKVKTWRI 1150
Query: 182 KTFEILQLGMIILMFAM 232
F +QLG I L++ +
Sbjct: 1151 DLFTCIQLGCIALLWVV 1167
>sp|P02730|B3AT_HUMAN Band 3 anion transport protein (Anion exchange protein 1) (AE 1)
(Solute carrier family 4 member 1) (CD233 antigen)
Length = 911
Score = 49.3 bits (116), Expect = 1e-05
Identities = 22/77 (28%), Positives = 47/77 (61%)
Frame = +2
Query: 2 VLIEPLLNYIPTSAMLGMFLYMGVMGIRDLVVTRRLIVMFKRQKHWKDHEYLRDIPPSVM 181
+L+EP+L+ IP + + G+FLYMGV + + + R++++FK K+ D Y++ + M
Sbjct: 774 ILMEPILSRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRM 833
Query: 182 KTFEILQLGMIILMFAM 232
F +Q+ + +++ +
Sbjct: 834 HLFTGIQIICLAVLWVV 850
>sp|Q9GKY1|B3A4_RABIT Anion exchange protein 4 (Anion exchanger 4) (Solute carrier family 4
member 9)
Length = 955
Score = 49.3 bits (116), Expect = 1e-05
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = +2
Query: 2 VLIEPLLNYIPTSAMLGMFLYMGVMGIRDLVVTRRLIVMFKRQKHWKDHEYLRDIPPSVM 181
+ + P+L +IP + G+FLYMGV + + +R+ +M KH D LR +P S +
Sbjct: 798 IFLAPVLKFIPMPVLYGIFLYMGVAALSSIQFMKRVQLMLMPAKHQPDLLLLRHVPLSRV 857
Query: 182 KTFEILQLGMIILMF 226
F +QL + L++
Sbjct: 858 HLFTAIQLACLGLLW 872
>sp|Q96Q91|B3A4_HUMAN Anion exchange protein 4 (Anion exchanger 4) (Solute carrier family 4
member 9) (Sodium bicarbonate cotransporter 5)
Length = 983
Score = 48.5 bits (114), Expect = 2e-05
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +2
Query: 2 VLIEPLLNYIPTSAMLGMFLYMGVMGIRDLVVTRRLIVMFKRQKHWKDHEYLRDIPPSVM 181
+ + P+L +IP + G+FLYMGV + + T R+ ++ KH D LR +P + +
Sbjct: 826 IFLAPVLKFIPMPVLYGIFLYMGVAALSSIQFTNRVKLLLMPAKHQPDLLLLRHVPLTRV 885
Query: 182 KTFEILQLGMIILMF 226
F +QL + L++
Sbjct: 886 HLFTAIQLACLGLLW 900
>sp|P48751|B3A3_HUMAN Anion exchange protein 3 (Neuronal band 3-like protein) (Solute
carrier family 4 member 3) (Cardiac/brain band 3-like
protein) (CAE3/BAE3)
Length = 1232
Score = 48.5 bits (114), Expect = 2e-05
Identities = 22/77 (28%), Positives = 44/77 (57%)
Frame = +2
Query: 2 VLIEPLLNYIPTSAMLGMFLYMGVMGIRDLVVTRRLIVMFKRQKHWKDHEYLRDIPPSVM 181
+++ +L IP + + G+FLYMGV + + +++RL+++ KH + Y+ + M
Sbjct: 1096 IVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLILMPAKHHPEQPYVTKVKTWRM 1155
Query: 182 KTFEILQLGMIILMFAM 232
F +QLG I L++ +
Sbjct: 1156 HLFTCIQLGCIALLWVV 1172
>sp|P32847|B3AT_ONCMY Band 3 anion exchange protein (Solute carrier family 4 member 1)
Length = 918
Score = 47.8 bits (112), Expect = 3e-05
Identities = 19/68 (27%), Positives = 41/68 (60%)
Frame = +2
Query: 2 VLIEPLLNYIPTSAMLGMFLYMGVMGIRDLVVTRRLIVMFKRQKHWKDHEYLRDIPPSVM 181
+L+EP+L IP +A+ G+FLYMG+ + + + R++++ +K++ Y + + M
Sbjct: 783 ILLEPILKMIPMTALFGIFLYMGITSLSGIQMWDRMLLLIVPRKYYPADAYAQRVTTMKM 842
Query: 182 KTFEILQL 205
F ++Q+
Sbjct: 843 HLFTLIQM 850
>sp|P04919|B3AT_MOUSE Band 3 anion transport protein (Anion exchange protein 1) (AE 1)
(Solute carrier family 4 member 1) (MEB3)
Length = 929
Score = 47.8 bits (112), Expect = 3e-05
Identities = 21/77 (27%), Positives = 47/77 (61%)
Frame = +2
Query: 2 VLIEPLLNYIPTSAMLGMFLYMGVMGIRDLVVTRRLIVMFKRQKHWKDHEYLRDIPPSVM 181
+L+EP+L+ IP + + G+FLYMGV + + + R++++FK K+ D +++ + M
Sbjct: 792 ILMEPILSRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPFVKRVKTWRM 851
Query: 182 KTFEILQLGMIILMFAM 232
F +Q+ + +++ +
Sbjct: 852 HLFTGIQIICLAVLWVV 868
>sp|P23562|B3AT_RAT Band 3 anion transport protein (Anion exchange protein 1) (AE 1)
(Solute carrier family 4 member 1)
Length = 927
Score = 47.4 bits (111), Expect = 4e-05
Identities = 20/77 (25%), Positives = 47/77 (61%)
Frame = +2
Query: 2 VLIEPLLNYIPTSAMLGMFLYMGVMGIRDLVVTRRLIVMFKRQKHWKDHEYLRDIPPSVM 181
+L+EP+L+ IP + + G+FLYMG+ + + + R++++FK K+ D +++ + M
Sbjct: 790 ILMEPILSRIPLAVLFGIFLYMGITSLSGIQLFDRILLLFKPPKYHPDVPFVKRVKTWRM 849
Query: 182 KTFEILQLGMIILMFAM 232
F +Q+ + +++ +
Sbjct: 850 HLFTGIQIICLAVLWVV 866
>sp|P48746|B3A2_RABIT Anion exchange protein 2 (Non-erythroid band 3-like protein) (AE2
anion exchanger) (Solute carrier family 4 member 2)
(B3RP)
Length = 1237
Score = 47.0 bits (110), Expect = 5e-05
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +2
Query: 2 VLIEPLLNYIPTSAMLGMFLYMGVMGIRDLVVTRRLIVMFKRQKHWKDHEYLRDIPPSVM 181
++I LL IP + + G+FLYMGV + + RL ++ KH D Y++ + M
Sbjct: 1100 IVIGDLLRQIPLAVLFGIFLYMGVTSLNGIQFYERLHLLLMPPKHHPDVTYVKKVRTLRM 1159
Query: 182 KTFEILQLGMIILMFAM 232
F LQL + L++A+
Sbjct: 1160 HLFTALQLLCLALLWAV 1176
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,373,692
Number of Sequences: 369166
Number of extensions: 1555953
Number of successful extensions: 3966
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3963
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6219306880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)