Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_P19
(206 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07858|CATB_HUMAN Cathepsin B precursor (Cathepsin B1) (... 100 2e-21
sp|P07688|CATB_BOVIN Cathepsin B precursor [Contains: Cathe... 96 3e-20
sp|P00787|CATB_RAT Cathepsin B precursor (Cathepsin B1) (RS... 95 6e-20
sp|P10605|CATB_MOUSE Cathepsin B precursor (Cathepsin B1) [... 93 2e-19
sp|P43233|CATB_CHICK Cathepsin B precursor (Cathepsin B1) [... 92 3e-19
sp|P43508|CPR4_CAEEL Cathepsin B-like cysteine proteinase 4... 92 3e-19
sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase p... 90 1e-18
sp|P43509|CPR5_CAEEL Cathepsin B-like cysteine proteinase 5... 90 1e-18
sp|P43510|CPR6_CAEEL Cathepsin B-like cysteine proteinase 6... 86 3e-17
sp|P43157|CYSP_SCHJA Cathepsin B-like cysteine proteinase p... 82 4e-16
>sp|P07858|CATB_HUMAN Cathepsin B precursor (Cathepsin B1) (APP secretase) (APPS)
[Contains: Cathepsin B light chain; Cathepsin B heavy
chain]
Length = 339
Score = 99.8 bits (247), Expect = 2e-21
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +2
Query: 2 ILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGSDECGIEDEVVAGIPK 151
ILGWGVEN TPYWLVANSWN WGDNG+FKILRG D CGIE EVVAGIP+
Sbjct: 282 ILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPR 331
>sp|P07688|CATB_BOVIN Cathepsin B precursor [Contains: Cathepsin B light chain; Cathepsin
B heavy chain]
Length = 335
Score = 95.9 bits (237), Expect = 3e-20
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +2
Query: 2 ILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGSDECGIEDEVVAGIP 148
ILGWGVEN TPYWLV NSWN WGDNG+FKILRG D CGIE E+VAG+P
Sbjct: 282 ILGWGVENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGMP 330
>sp|P00787|CATB_RAT Cathepsin B precursor (Cathepsin B1) (RSG-2) [Contains: Cathepsin B
light chain; Cathepsin B heavy chain]
Length = 339
Score = 94.7 bits (234), Expect = 6e-20
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +2
Query: 2 ILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGSDECGIEDEVVAGIPK 151
ILGWG+EN PYWLVANSWN WGDNG+FKILRG + CGIE E+VAGIP+
Sbjct: 282 ILGWGIENGVPYWLVANSWNVDWGDNGFFKILRGENHCGIESEIVAGIPR 331
>sp|P10605|CATB_MOUSE Cathepsin B precursor (Cathepsin B1) [Contains: Cathepsin B light
chain; Cathepsin B heavy chain]
Length = 339
Score = 93.2 bits (230), Expect = 2e-19
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = +2
Query: 2 ILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGSDECGIEDEVVAGIPK 151
ILGWGVEN PYWL ANSWN WGDNG+FKILRG + CGIE E+VAGIP+
Sbjct: 282 ILGWGVENGVPYWLAANSWNLDWGDNGFFKILRGENHCGIESEIVAGIPR 331
>sp|P43233|CATB_CHICK Cathepsin B precursor (Cathepsin B1) [Contains: Cathepsin B light
chain; Cathepsin B heavy chain]
Length = 340
Score = 92.4 bits (228), Expect = 3e-19
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = +2
Query: 2 ILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGSDECGIEDEVVAGIPKL 154
ILGWGVEN TPYWL ANSWN WG G+FKILRG D CGIE E+VAG+P++
Sbjct: 283 ILGWGVENGTPYWLAANSWNTDWGITGFFKILRGEDHCGIESEIVAGVPRM 333
>sp|P43508|CPR4_CAEEL Cathepsin B-like cysteine proteinase 4 precursor (Cysteine
protease-related 4)
Length = 335
Score = 92.4 bits (228), Expect = 3e-19
Identities = 36/51 (70%), Positives = 44/51 (86%)
Frame = +2
Query: 2 ILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGSDECGIEDEVVAGIPKL 154
ILGWG +N TPYWLVANSWN WG+NGYF+I+RG++ECGIE VV G+PK+
Sbjct: 285 ILGWGTDNGTPYWLVANSWNVNWGENGYFRIIRGTNECGIEHAVVGGVPKV 335
>sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase precursor (Antigen Sm31)
Length = 340
Score = 90.1 bits (222), Expect = 1e-18
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = +2
Query: 2 ILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGSDECGIEDEVVAG 142
I+GWGVEN TPYWL+ANSWN WG+NGYF+I+RG DEC IE EV+AG
Sbjct: 291 IIGWGVENKTPYWLIANSWNEDWGENGYFRIVRGRDECSIESEVIAG 337
>sp|P43509|CPR5_CAEEL Cathepsin B-like cysteine proteinase 5 precursor (Cysteine
protease-related 5)
Length = 344
Score = 90.1 bits (222), Expect = 1e-18
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = +2
Query: 2 ILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGSDECGIEDEVVAGIPKL 154
ILGWGV+N TPYWLVANSWN WG+ GYF+I+RG +ECGIE VAGIP L
Sbjct: 290 ILGWGVDNGTPYWLVANSWNVAWGEKGYFRIIRGLNECGIEHSAVAGIPDL 340
>sp|P43510|CPR6_CAEEL Cathepsin B-like cysteine proteinase 6 precursor (Cysteine
protease-related 6)
Length = 379
Score = 85.5 bits (210), Expect = 3e-17
Identities = 33/51 (64%), Positives = 42/51 (82%)
Frame = +2
Query: 2 ILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGSDECGIEDEVVAGIPKL 154
++GWG+++ PYW VANSWN WG++G+F+ILRG DECGIE VV GIPKL
Sbjct: 309 LIGWGIDDGIPYWTVANSWNTDWGEDGFFRILRGVDECGIESGVVGGIPKL 359
>sp|P43157|CYSP_SCHJA Cathepsin B-like cysteine proteinase precursor (Antigen Sj31)
Length = 342
Score = 82.0 bits (201), Expect = 4e-16
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +2
Query: 2 ILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGSDECGIEDEVVAGIPK 151
I+GWGVE TPYWL+ANSWN WG+ G F+++RG DEC IE +VVAG+ K
Sbjct: 292 IIGWGVEKRTPYWLIANSWNEDWGEKGLFRMVRGRDECSIESDVVAGLIK 341
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,397,766
Number of Sequences: 369166
Number of extensions: 396605
Number of successful extensions: 1257
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 68,354,980
effective HSP length: 40
effective length of database: 60,965,580
effective search space used: 1707036240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)