Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_P10
(453 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q58318|Y908_METJA Hypothetical protein MJ0908 32 0.85
sp|P50080|AZR1_YEAST Azole resistance protein 1 31 1.4
sp|O33815|BGAL_STAXY Beta-galactosidase (Lactase) 29 4.2
sp|Q90WJ8|AJL2_ANGJA Lactose-binding lectin l-2 precursor (... 29 5.5
sp|Q99KE1|MAOM_MOUSE NAD-dependent malic enzyme, mitochondr... 28 9.4
sp|P26685|RIR1_ASFM2 Ribonucleoside-diphosphate reductase l... 28 9.4
sp|P42724|TFXB_RHILT Trifolitoxin processing protein tfxB 28 9.4
sp|P42491|RIR1_ASFB7 Ribonucleoside-diphosphate reductase l... 28 9.4
sp|P23368|MAOM_HUMAN NAD-dependent malic enzyme, mitochondr... 28 9.4
>sp|Q58318|Y908_METJA Hypothetical protein MJ0908
Length = 1232
Score = 31.6 bits (70), Expect = 0.85
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Frame = +2
Query: 140 SWKIVEGWNEVFVAYGGAEHSKNYYEV-----------LVESSILNHKGYEWRWADGEN 283
+W+ +E + +V+V +GG + K YY V +E ++ N EW +G++
Sbjct: 1016 NWESIEDFAKVYVEWGGYAYGKGYYGVEAKEEFINRLSKIELTVKNEDSQEWDIFEGDD 1074
>sp|P50080|AZR1_YEAST Azole resistance protein 1
Length = 613
Score = 30.8 bits (68), Expect = 1.4
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = -2
Query: 218 LRNNFYYVLRLRKLQKLHSSLQQFSR-----NILTFVFCSCDKSLITSSHSFRGN 69
+RN Y++L+++ KL+ + F +I+ FVFCS + I + +F GN
Sbjct: 267 VRNVAYHLLKIKGFSKLNGWRKPFMELIFMYDIIEFVFCSAGFTCILLAFTFGGN 321
>sp|O33815|BGAL_STAXY Beta-galactosidase (Lactase)
Length = 994
Score = 29.3 bits (64), Expect = 4.2
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Frame = +2
Query: 179 AYGGAEHSKNYYEVLVESSILNHKGYEWRWADGENVPKGAVVGGINDGQPLYVARSNVGG 358
A G + + Y+ LVE G+ W W D A+ G+ DG P++ + G
Sbjct: 514 AMGNSPGDLHAYQTLVEQYDSFIGGFVWEWCD------HAIQTGMKDGNPIFRYGGDFGE 567
Query: 359 QV------VVGKYFPQH--GCGYFPYGGEEHR 430
++ V G FP GY+ + +EHR
Sbjct: 568 KLHDGNFCVDGIVFPNRVPHEGYYEF-KQEHR 598
>sp|Q90WJ8|AJL2_ANGJA Lactose-binding lectin l-2 precursor (Ajl-2)
Length = 166
Score = 28.9 bits (63), Expect = 5.5
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +2
Query: 245 HKGYEWRWADGENVPKGAVVGGINDGQPLYVARSNVGGQVVVGKYFPQHGCGYFPYGGEE 424
H+G W W+DG + N G+P ++ GG + C + YGG++
Sbjct: 100 HEGRSWLWSDGTSASAEGDFSMWNPGEP-----NDAGG---------KEDCVHDNYGGQK 145
Query: 425 H 427
H
Sbjct: 146 H 146
>sp|Q99KE1|MAOM_MOUSE NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic
enzyme 2)
Length = 589
Score = 28.1 bits (61), Expect = 9.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 257 RNLYGLKYLIPPKLRNNFYYVLRL-RKLQKLHSSLQQF 147
R + GL+ L+PPK+ LR R L+K+ S L+++
Sbjct: 45 RQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKY 82
>sp|P26685|RIR1_ASFM2 Ribonucleoside-diphosphate reductase large chain (Ribonucleotide
reductase)
Length = 779
Score = 28.1 bits (61), Expect = 9.4
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 18 GTGVELCLSWVKANNGFIPPKAVRA-GDQTFV 110
G G+ LCLS ++A N FI +R+ G Q ++
Sbjct: 220 GGGIGLCLSGIRAKNSFISGSGLRSNGIQNYI 251
>sp|P42724|TFXB_RHILT Trifolitoxin processing protein tfxB
Length = 373
Score = 28.1 bits (61), Expect = 9.4
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 266 WADGENVPKGAVVGGINDGQPLYVARSNVGGQVVVGKYFPQHGCGYFPYGGEEHRVDSVE 445
+A GE++ K GG AR + VVVG G + Y HR+D++E
Sbjct: 213 YATGEHLRKAVPSGG---------ARHPIEFYVVVGDEIAGIEAGVYHYNVRHHRLDAIE 263
Query: 446 V 448
+
Sbjct: 264 I 264
>sp|P42491|RIR1_ASFB7 Ribonucleoside-diphosphate reductase large chain (Ribonucleotide
reductase)
Length = 778
Score = 28.1 bits (61), Expect = 9.4
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 18 GTGVELCLSWVKANNGFIPPKAVRA-GDQTFV 110
G G+ LCLS ++A N FI +R+ G Q ++
Sbjct: 219 GGGIGLCLSGIRAKNSFISGSGLRSNGIQNYI 250
>sp|P23368|MAOM_HUMAN NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic
enzyme 2)
Length = 584
Score = 28.1 bits (61), Expect = 9.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 257 RNLYGLKYLIPPKLRNNFYYVLRL-RKLQKLHSSLQQF 147
R + GL+ L+PPK+ LR R L+K+ S L+++
Sbjct: 45 RQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKY 82
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,652,307
Number of Sequences: 369166
Number of extensions: 1311634
Number of successful extensions: 3861
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3856
length of database: 68,354,980
effective HSP length: 101
effective length of database: 49,696,745
effective search space used: 2435140505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)