Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_N04
(739 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P92176|ACT2_LUMTE Actin-2 493 e-139
sp|P91754|ACT_LUMRU Actin 491 e-139
sp|P92182|ACT1_LUMTE Actin-1 491 e-139
sp|Q26065|ACT_PLAMG Actin, adductor muscle 491 e-139
sp|P53464|ACTM_HELTB Actin, cytoskeletal (M) 491 e-139
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 491 e-138
sp|P53463|ACTM_HELER Actin, cytoskeletal (M) 491 e-138
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 490 e-138
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 490 e-138
sp|P41340|ACT3_LIMPO Actin-3 490 e-138
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 493 bits (1269), Expect = e-139
Identities = 241/246 (97%), Positives = 244/246 (99%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 181 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 360
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 133
Query: 361 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 540
YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
Query: 541 LTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGN 720
LTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TASASSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTASASSSLEKSYELPDGQVITIGN 253
Query: 721 ERFRCP 738
ERFRCP
Sbjct: 254 ERFRCP 259
>sp|P91754|ACT_LUMRU Actin
Length = 372
Score = 491 bits (1265), Expect = e-139
Identities = 240/246 (97%), Positives = 244/246 (99%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 10 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 69
Query: 181 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 360
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAM
Sbjct: 70 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 129
Query: 361 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 540
YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI
Sbjct: 130 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 189
Query: 541 LTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGN 720
LTERGYSFTTTAEREIVRDIKEKLCY+ALDFD EM TA++SSSLEKSYELPDGQVITIGN
Sbjct: 190 LTERGYSFTTTAEREIVRDIKEKLCYVALDFDQEMGTAASSSSLEKSYELPDGQVITIGN 249
Query: 721 ERFRCP 738
ERFRCP
Sbjct: 250 ERFRCP 255
>sp|P92182|ACT1_LUMTE Actin-1
Length = 376
Score = 491 bits (1265), Expect = e-139
Identities = 240/246 (97%), Positives = 244/246 (99%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 181 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 360
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 133
Query: 361 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 540
YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
Query: 541 LTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGN 720
LTERGYSFTTTAEREIVRDIKEKLCY+ALDFD EM TA++SSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFDQEMGTAASSSSLEKSYELPDGQVITIGN 253
Query: 721 ERFRCP 738
ERFRCP
Sbjct: 254 ERFRCP 259
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 491 bits (1264), Expect = e-139
Identities = 240/246 (97%), Positives = 244/246 (99%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 181 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 360
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 133
Query: 361 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 540
YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
Query: 541 LTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGN 720
LTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGN 253
Query: 721 ERFRCP 738
ERFRCP
Sbjct: 254 ERFRCP 259
>sp|P53464|ACTM_HELTB Actin, cytoskeletal (M)
Length = 376
Score = 491 bits (1264), Expect = e-139
Identities = 241/246 (97%), Positives = 243/246 (98%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 181 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 360
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 133
Query: 361 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 540
YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
Query: 541 LTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGN 720
LTERGYSFTTTAEREIVRDIKEKLCY ALDF+ EM TA+ASSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYTALDFEQEMATAAASSSLEKSYELPDGQVITIGN 253
Query: 721 ERFRCP 738
ERFRCP
Sbjct: 254 ERFRCP 259
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 491 bits (1263), Expect = e-138
Identities = 239/246 (97%), Positives = 243/246 (98%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 181 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 360
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
Query: 361 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 540
YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKI 193
Query: 541 LTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGN 720
LTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGN 253
Query: 721 ERFRCP 738
ERFRCP
Sbjct: 254 ERFRCP 259
>sp|P53463|ACTM_HELER Actin, cytoskeletal (M)
Length = 376
Score = 491 bits (1263), Expect = e-138
Identities = 241/246 (97%), Positives = 243/246 (98%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 181 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 360
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 133
Query: 361 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 540
YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
Query: 541 LTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGN 720
LTERGYSFTTTAEREIVRDIKEKLCY ALDF+ EM TA+ASSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYSALDFEQEMATAAASSSLEKSYELPDGQVITIGN 253
Query: 721 ERFRCP 738
ERFRCP
Sbjct: 254 ERFRCP 259
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 490 bits (1262), Expect = e-138
Identities = 239/246 (97%), Positives = 243/246 (98%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 13 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 72
Query: 181 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 360
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAM
Sbjct: 73 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 132
Query: 361 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 540
YVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI
Sbjct: 133 YVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 192
Query: 541 LTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGN 720
LTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TAS+SSSLEKSYELPDGQVITIGN
Sbjct: 193 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATASSSSSLEKSYELPDGQVITIGN 252
Query: 721 ERFRCP 738
ERFRCP
Sbjct: 253 ERFRCP 258
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 490 bits (1261), Expect = e-138
Identities = 238/246 (96%), Positives = 243/246 (98%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 181 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 360
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
Query: 361 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 540
YVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKI 193
Query: 541 LTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGN 720
LTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGN 253
Query: 721 ERFRCP 738
ERFRCP
Sbjct: 254 ERFRCP 259
>sp|P41340|ACT3_LIMPO Actin-3
Length = 376
Score = 490 bits (1261), Expect = e-138
Identities = 239/246 (97%), Positives = 243/246 (98%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 181 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAM 360
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
Query: 361 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 540
YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
Query: 541 LTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGN 720
LTERGYSFTTTAEREIVRDIKEKLCY+ALDFD EM TA++SSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFDQEMATAASSSSLEKSYELPDGQVITIGN 253
Query: 721 ERFRCP 738
ERFRCP
Sbjct: 254 ERFRCP 259
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,518,349
Number of Sequences: 369166
Number of extensions: 1759923
Number of successful extensions: 5821
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5688
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6631293200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)