Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_N02
(614 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P00504|AATC_CHICK Aspartate aminotransferase, cytoplasmi... 217 2e-56
sp|P13221|AATC_RAT Aspartate aminotransferase, cytoplasmic ... 208 8e-54
sp|P05201|AATC_MOUSE Aspartate aminotransferase, cytoplasmi... 207 1e-53
sp|P33097|AATC_BOVIN Aspartate aminotransferase, cytoplasmi... 205 7e-53
sp|P08906|AATC_HORSE Aspartate aminotransferase, cytoplasmi... 203 2e-52
sp|P00503|AATC_PIG Aspartate aminotransferase, cytoplasmic ... 203 2e-52
sp|P17174|AATC_HUMAN Aspartate aminotransferase, cytoplasmi... 197 1e-50
sp|Q22067|AATC_CAEEL Probable aspartate aminotransferase, c... 194 2e-49
sp|P37833|AATC_ORYSA Aspartate aminotransferase, cytoplasmi... 179 7e-45
sp|P46644|AAT3_ARATH Aspartate aminotransferase, chloroplas... 177 1e-44
>sp|P00504|AATC_CHICK Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 412
Score = 217 bits (553), Expect = 2e-56
Identities = 103/166 (62%), Positives = 125/166 (75%)
Frame = +3
Query: 18 QGFELFACQSFSKNFGLYNERVGNLCIVTKDAAITGRVKSQMTVLVRQAWSNPPNHGGRI 197
+GFELF QSFSKNFGLYNERVGNL +V KD RV SQM +VR WSNPP+ G RI
Sbjct: 246 EGFELFCAQSFSKNFGLYNERVGNLSVVGKDEDNVQRVLSQMEKIVRTTWSNPPSQGARI 305
Query: 198 VATVLSNPALFAEWKGNVKLMADRVILMRQMLFEKLQSFGTPGSWEHVIKQIGMFSFTGL 377
VAT L++P LFAEWK NVK MADRV+LMR L +L+S GTPG+W H+ QIGMFSFTGL
Sbjct: 306 VATTLTSPQLFAEWKDNVKTMADRVLLMRSELRSRLESLGTPGTWNHITDQIGMFSFTGL 365
Query: 378 NKNQVDHMRNKYHIYMLNDGRINMCGLNNSNVEYVAKAIDDAIRNV 515
N QV++M + HIY++ GRINMCGL N++YVAK+I +A+ +
Sbjct: 366 NPKQVEYMIKEKHIYLMASGRINMCGLTTKNLDYVAKSIHEAVTKI 411
>sp|P13221|AATC_RAT Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 413
Score = 208 bits (530), Expect = 8e-54
Identities = 99/163 (60%), Positives = 123/163 (75%)
Frame = +3
Query: 18 QGFELFACQSFSKNFGLYNERVGNLCIVTKDAAITGRVKSQMTVLVRQAWSNPPNHGGRI 197
+GFELF QSFSKNFGLYNERVGNL +V K+ RV SQM +VR WSNPP G RI
Sbjct: 247 EGFELFCPQSFSKNFGLYNERVGNLTVVGKEHDSVLRVLSQMEKIVRITWSNPPAQGARI 306
Query: 198 VATVLSNPALFAEWKGNVKLMADRVILMRQMLFEKLQSFGTPGSWEHVIKQIGMFSFTGL 377
VAT LSNP LF EWKGNVK MADR++ MR L +L++ TPG+W H+ +QIGMFSFTGL
Sbjct: 307 VATTLSNPELFKEWKGNVKTMADRILTMRSELRARLEALKTPGTWSHITEQIGMFSFTGL 366
Query: 378 NKNQVDHMRNKYHIYMLNDGRINMCGLNNSNVEYVAKAIDDAI 506
N QV+++ N+ HIY++ GRINMCGL N++YVA +I++A+
Sbjct: 367 NPKQVEYLVNEKHIYLMPSGRINMCGLTTKNLDYVATSINEAV 409
>sp|P05201|AATC_MOUSE Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 413
Score = 207 bits (528), Expect = 1e-53
Identities = 98/166 (59%), Positives = 123/166 (74%)
Frame = +3
Query: 18 QGFELFACQSFSKNFGLYNERVGNLCIVTKDAAITGRVKSQMTVLVRQAWSNPPNHGGRI 197
+GFELF QSFSKNFGLYNERVGNL +V K++ RV SQM +VR WSNPP G RI
Sbjct: 247 EGFELFCAQSFSKNFGLYNERVGNLTVVGKESDSVLRVLSQMEKIVRITWSNPPAQGARI 306
Query: 198 VATVLSNPALFAEWKGNVKLMADRVILMRQMLFEKLQSFGTPGSWEHVIKQIGMFSFTGL 377
VA LS+P LF EWKGNVK MADR++ MR L +L++ TPG+W H+ +QIGMFSFTGL
Sbjct: 307 VAATLSDPELFKEWKGNVKTMADRILTMRSELRARLEALKTPGTWSHITEQIGMFSFTGL 366
Query: 378 NKNQVDHMRNKYHIYMLNDGRINMCGLNNSNVEYVAKAIDDAIRNV 515
N QV+++ N+ HIY+L GRINMCGL N++YVA +I +A+ +
Sbjct: 367 NPKQVEYLVNEKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVTKI 412
>sp|P33097|AATC_BOVIN Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 413
Score = 205 bits (522), Expect = 7e-53
Identities = 98/166 (59%), Positives = 121/166 (72%)
Frame = +3
Query: 18 QGFELFACQSFSKNFGLYNERVGNLCIVTKDAAITGRVKSQMTVLVRQAWSNPPNHGGRI 197
+GFELF QSFSKNFGLYNERVGNL +V K+ RV SQM +VR WSNPP G RI
Sbjct: 247 EGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMEKIVRITWSNPPAQGARI 306
Query: 198 VATVLSNPALFAEWKGNVKLMADRVILMRQMLFEKLQSFGTPGSWEHVIKQIGMFSFTGL 377
VA LS+P LF EW GNVK MADR++ MR L +L++ TPG+W H+ +QIGMFSFTGL
Sbjct: 307 VARTLSDPELFNEWTGNVKTMADRILTMRSELRARLEALKTPGTWNHITEQIGMFSFTGL 366
Query: 378 NKNQVDHMRNKYHIYMLNDGRINMCGLNNSNVEYVAKAIDDAIRNV 515
N QV+++ N+ HIY+L GRINMCGL N+EYVA +I +A+ +
Sbjct: 367 NPKQVEYLINEKHIYLLPSGRINMCGLTTKNLEYVATSIHEAVTKI 412
>sp|P08906|AATC_HORSE Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 412
Score = 203 bits (517), Expect = 2e-52
Identities = 97/163 (59%), Positives = 120/163 (73%)
Frame = +3
Query: 18 QGFELFACQSFSKNFGLYNERVGNLCIVTKDAAITGRVKSQMTVLVRQAWSNPPNHGGRI 197
+GFELF QSFSKNFGLYNERVGNL +V K+ RV SQM +VR WSNPP G RI
Sbjct: 246 EGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRITWSNPPAQGARI 305
Query: 198 VATVLSNPALFAEWKGNVKLMADRVILMRQMLFEKLQSFGTPGSWEHVIKQIGMFSFTGL 377
VA LS+P LF EW GNVK MADR++ MR L +L++ TPG+W H+ +QIGMFSFTGL
Sbjct: 306 VAFTLSDPGLFKEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITEQIGMFSFTGL 365
Query: 378 NKNQVDHMRNKYHIYMLNDGRINMCGLNNSNVEYVAKAIDDAI 506
N QV+++ N+ HIY+L GRINMCGL N++YVA +I +A+
Sbjct: 366 NPKQVEYLVNQKHIYLLPSGRINMCGLTTKNLDYVATSIHEAV 408
>sp|P00503|AATC_PIG Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 413
Score = 203 bits (517), Expect = 2e-52
Identities = 97/166 (58%), Positives = 120/166 (72%)
Frame = +3
Query: 18 QGFELFACQSFSKNFGLYNERVGNLCIVTKDAAITGRVKSQMTVLVRQAWSNPPNHGGRI 197
+GFELF QSFSKNFGLYNERVGNL +V K+ RV SQM +VR WSNPP G RI
Sbjct: 247 EGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMEKIVRVTWSNPPAQGARI 306
Query: 198 VATVLSNPALFAEWKGNVKLMADRVILMRQMLFEKLQSFGTPGSWEHVIKQIGMFSFTGL 377
VA LS+P LF EW GNVK MADR++ MR L +L++ TPG+W H+ QIGMFSFTGL
Sbjct: 307 VARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGL 366
Query: 378 NKNQVDHMRNKYHIYMLNDGRINMCGLNNSNVEYVAKAIDDAIRNV 515
N QV+++ N+ HIY+L GRINMCGL N++YVA +I +A+ +
Sbjct: 367 NPKQVEYLINEKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVTKI 412
>sp|P17174|AATC_HUMAN Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 413
Score = 197 bits (502), Expect = 1e-50
Identities = 94/166 (56%), Positives = 119/166 (71%)
Frame = +3
Query: 18 QGFELFACQSFSKNFGLYNERVGNLCIVTKDAAITGRVKSQMTVLVRQAWSNPPNHGGRI 197
+GFE F QSFSKNFGLYNERVGNL +V K+ +V SQM +VR WSNPP G RI
Sbjct: 247 EGFEFFCAQSFSKNFGLYNERVGNLTVVGKEPESILQVLSQMEKIVRITWSNPPAQGARI 306
Query: 198 VATVLSNPALFAEWKGNVKLMADRVILMRQMLFEKLQSFGTPGSWEHVIKQIGMFSFTGL 377
VA+ LSNP LF EW GNVK MADR++ MR L +L++ TPG+W H+ QIGMFSFTGL
Sbjct: 307 VASTLSNPELFEEWTGNVKTMADRILTMRSELRARLEALKTPGTWNHITDQIGMFSFTGL 366
Query: 378 NKNQVDHMRNKYHIYMLNDGRINMCGLNNSNVEYVAKAIDDAIRNV 515
N QV+++ N+ HIY+L GRIN+ GL N++YVA +I +A+ +
Sbjct: 367 NPKQVEYLVNEKHIYLLPSGRINVSGLTTKNLDYVATSIHEAVTKI 412
>sp|Q22067|AATC_CAEEL Probable aspartate aminotransferase, cytoplasmic (Transaminase A)
(Glutamate oxaloacetate transaminase-1)
Length = 408
Score = 194 bits (493), Expect = 2e-49
Identities = 88/167 (52%), Positives = 119/167 (71%)
Frame = +3
Query: 15 EQGFELFACQSFSKNFGLYNERVGNLCIVTKDAAITGRVKSQMTVLVRQAWSNPPNHGGR 194
+QG E+ QSF+KNFGLYNERVGNL +V + A+ +SQM++++R WSNPP HG R
Sbjct: 238 DQGMEMVVSQSFAKNFGLYNERVGNLTVVVNNPAVIAGFQSQMSLVIRANWSNPPAHGAR 297
Query: 195 IVATVLSNPALFAEWKGNVKLMADRVILMRQMLFEKLQSFGTPGSWEHVIKQIGMFSFTG 374
IV VL+ PA +W +++ M+ R+ MR L L GTPG+W+H+I+QIGMFS+TG
Sbjct: 298 IVHKVLTTPARREQWNQSIQAMSSRIKQMRAALLRHLMDLGTPGTWDHIIQQIGMFSYTG 357
Query: 375 LNKNQVDHMRNKYHIYMLNDGRINMCGLNNSNVEYVAKAIDDAIRNV 515
L QVDH+ + +++L DGRIN+CGLN NVEYVAKAID+ +R V
Sbjct: 358 LTSAQVDHLIANHKVFLLRDGRINICGLNTKNVEYVAKAIDETVRAV 404
>sp|P37833|AATC_ORYSA Aspartate aminotransferase, cytoplasmic (Transaminase A)
Length = 407
Score = 179 bits (453), Expect = 7e-45
Identities = 87/162 (53%), Positives = 115/162 (70%)
Frame = +3
Query: 21 GFELFACQSFSKNFGLYNERVGNLCIVTKDAAITGRVKSQMTVLVRQAWSNPPNHGGRIV 200
G EL QS++KN GLY ERVG L IV A + RV+SQ+ +++R +SNPP HG IV
Sbjct: 242 GGELLMAQSYAKNMGLYGERVGALSIVCGSADVAVRVESQLKLVIRPMYSNPPIHGASIV 301
Query: 201 ATVLSNPALFAEWKGNVKLMADRVILMRQMLFEKLQSFGTPGSWEHVIKQIGMFSFTGLN 380
AT+L + A+F EW +K MADR+I MRQ LF+ L++ TPG W H+IKQIGMF+FTGLN
Sbjct: 302 ATILKDSAMFNEWTVELKGMADRIISMRQQLFDALKTRETPGDWSHIIKQIGMFTFTGLN 361
Query: 381 KNQVDHMRNKYHIYMLNDGRINMCGLNNSNVEYVAKAIDDAI 506
+QV MR +YHIYM +DGRI+M GL+ + ++A AI A+
Sbjct: 362 SDQVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAIHAAV 403
>sp|P46644|AAT3_ARATH Aspartate aminotransferase, chloroplast precursor (Transaminase A)
Length = 449
Score = 177 bits (450), Expect = 1e-44
Identities = 86/158 (54%), Positives = 112/158 (70%)
Frame = +3
Query: 21 GFELFACQSFSKNFGLYNERVGNLCIVTKDAAITGRVKSQMTVLVRQAWSNPPNHGGRIV 200
G E QS++KN GLY ERVG L IV K A + GRV+SQ+ +++R +S+PP HG IV
Sbjct: 284 GGECLVAQSYAKNMGLYGERVGALSIVCKSADVAGRVESQLKLVIRPMYSSPPIHGASIV 343
Query: 201 ATVLSNPALFAEWKGNVKLMADRVILMRQMLFEKLQSFGTPGSWEHVIKQIGMFSFTGLN 380
A +L + LF EW +K MADR+I MR+ LFE L++ GTPG W H+IKQIGMF+FTGLN
Sbjct: 344 AVILRDKNLFNEWTLELKAMADRIISMRKQLFEALRTRGTPGDWSHIIKQIGMFTFTGLN 403
Query: 381 KNQVDHMRNKYHIYMLNDGRINMCGLNNSNVEYVAKAI 494
QV M +YHIYM +DGRI+M GL++ V ++A AI
Sbjct: 404 PAQVSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAI 441
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,508,677
Number of Sequences: 369166
Number of extensions: 1390768
Number of successful extensions: 3323
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3317
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4846822695
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)