Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_M04
(852 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P02465|CO1A2_BOVIN Collagen alpha 2(I) chain precursor 116 7e-26
sp|Q28668|CO1A2_RABIT Collagen alpha 2(I) chain precursor 116 7e-26
sp|O46392|CO1A2_CANFA Collagen alpha 2(I) chain precursor 112 1e-24
sp|P02460|CA12_CHICK Collagen alpha 1(II) chain precursor 110 6e-24
sp||P12105_3 [Segment 3 of 3] Collagen alpha 1(III) chain p... 109 8e-24
sp|P18856|CAF1_EPHMU Collagen EMF1-alpha precursor (Fibrill... 107 5e-23
sp|P02458|CO2A1_HUMAN Collagen alpha 1(II) chain precursor ... 105 2e-22
sp|P12107|CA1B_HUMAN Collagen alpha 1(XI) chain precursor 105 2e-22
sp|O42350|CO1A2_RANCA Collagen alpha 2(I) chain precursor 103 6e-22
sp|P20909|CA1B_RAT Collagen alpha 1(XI) chain precursor 102 1e-21
>sp|P02465|CO1A2_BOVIN Collagen alpha 2(I) chain precursor
Length = 1364
Score = 116 bits (291), Expect = 7e-26
Identities = 83/262 (31%), Positives = 124/262 (47%), Gaps = 28/262 (10%)
Frame = +3
Query: 150 QGPVGISGPRGDPGI---PGAIGPTGLSGKKGSNXXXXXXXXXXXXXXXXXXXX------ 302
+GP G SGP G G PGA+GP G+ G +GS
Sbjct: 1051 RGPAGPSGPAGKDGRIGQPGAVGPAGIRGSQGSQGPAGPPGPPGPPGPPGPSGGGYEFGF 1110
Query: 303 ----IMAMQLRSPT--KGVVYGDDPAAAELLGNNAIKN---PQGTKEVPARTCKQLSSEN 455
A Q RSPT + Y D L NN I+ P+G+++ PARTC+ L +
Sbjct: 1111 DGDFYRADQPRSPTSLRPKDYEVDATLKSL--NNQIETLLTPEGSRKNPARTCRDLRLSH 1168
Query: 456 PNIPDGEYWIDPNGGRTSDAVKVFCKISEEKTCIKPLSKEISIRSW-NSPITKGHTWLKS 632
P G YWIDPN G T DA+KV+C S +TCI+ ++I +++W + K H W+
Sbjct: 1169 PEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPEDIPVKNWYRNSKAKKHVWVGE 1228
Query: 633 LLN-SDEIQYSIPN-------GQLAFLKIYSDAATQRITFACENHPIIGNEEKVNKVMAP 788
+N + +Y++ QLAF+++ ++ A+Q IT+ C+N +EE N A
Sbjct: 1229 TINGGTQFEYNVEGVTTKEMATQLAFMRLLANHASQNITYHCKNSIAYMDEETGNLKKAV 1288
Query: 789 RLLADDDT-IIKMTQSKLKYTV 851
L +D ++ S+ YTV
Sbjct: 1289 ILQGSNDVELVAEGNSRFTYTV 1310
Score = 40.0 bits (92), Expect = 0.008
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
GP G +GPRG+ G+PG GP G G G+N
Sbjct: 272 GPAGPAGPRGEVGLPGLSGPVGPPGNPGAN 301
Score = 39.3 bits (90), Expect = 0.014
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP+G+ GPRG PG GA GP G G G
Sbjct: 89 GPMGLMGPRGPPGASGAPGPQGFQGPPG 116
Score = 38.1 bits (87), Expect = 0.031
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GPVG G RG+PG GA+GP G G +G
Sbjct: 968 GPVGKHGNRGEPGPAGAVGPAGAVGPRG 995
Score = 37.7 bits (86), Expect = 0.041
Identities = 18/31 (58%), Positives = 19/31 (61%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+GP G G RGD G PG GP GL G KG N
Sbjct: 994 RGPSGPQGIRGDKGEPGDKGPRGLPGLKGHN 1024
Score = 37.0 bits (84), Expect = 0.069
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP G+PG PG GP G G G
Sbjct: 107 GPQGFQGPPGEPGEPGQTGPAGARGPPG 134
Score = 37.0 bits (84), Expect = 0.069
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 153 GPVGISGPRGD---PGIPGAIGPTGLSGKKGS 239
GP G+ GP GD PG PG +GP G G G+
Sbjct: 425 GPAGVRGPNGDSGRPGEPGLMGPRGFPGSPGN 456
Score = 37.0 bits (84), Expect = 0.069
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+ GP G G RG PG GA GPTG G +G
Sbjct: 579 LPGPAGARGERGPPGESGAAGPTGPIGSRG 608
Score = 36.6 bits (83), Expect = 0.091
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+ GPRG PG PG IGP G G G
Sbjct: 440 GEPGLMGPRGFPGSPGNIGPAGKEGPVG 467
Score = 36.2 bits (82), Expect = 0.12
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +GPRG PG G +GP G +G G
Sbjct: 698 GPAGPAGPRGSPGERGEVGPAGPNGFAG 725
Score = 36.2 bits (82), Expect = 0.12
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+QG G++G GD G PGA+GP G G G
Sbjct: 1026 LQGLPGLAGHHGDQGAPGAVGPAGPRGPAG 1055
Score = 35.4 bits (80), Expect = 0.20
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
GP G +GP G G PGA G G G KG N
Sbjct: 719 GPNGFAGPAGAAGQPGAKGERGTKGPKGEN 748
Score = 34.3 bits (77), Expect = 0.45
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 153 GPVGISGPRGDPGI---PGAIGPTGLSGKKGS 239
GP G GP G PGI PG IGP G G+ G+
Sbjct: 458 GPAGKEGPVGLPGIDGRPGPIGPAGARGEPGN 489
Score = 34.3 bits (77), Expect = 0.45
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +3
Query: 153 GPVGISGPRGDP---GIPGAIGPTGLSGKKG 236
GP+G +G RG+P G PG GP+G GK G
Sbjct: 476 GPIGPAGARGEPGNIGFPGPKGPSGDPGKAG 506
Score = 33.9 bits (76), Expect = 0.59
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP+GI+GP G G PG +G G++G G
Sbjct: 893 GPLGIAGPPGARGPPGNVGNPGVNGAPG 920
Score = 33.5 bits (75), Expect = 0.77
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+QG G GP G PG G GP G +G+ G
Sbjct: 537 VQGGKGEQGPAGPPGFQGLPGPAGTAGEAG 566
Score = 33.1 bits (74), Expect = 1.0
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 153 GPVGISGP---RGDPGIPGAIGPTGLSGKKGS 239
GPVG +GP G PG PGA GP G G G+
Sbjct: 239 GPVGPAGPIGSAGPPGFPGAPGPKGELGPVGN 270
Score = 33.1 bits (74), Expect = 1.0
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +G RGD G PGA G G +G+ G
Sbjct: 767 GPPGPAGSRGDGGPPGATGFPGAAGRTG 794
Score = 32.7 bits (73), Expect = 1.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 6/35 (17%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIG------PTGLSGKKGS 239
GP G G G+ G PGA+G P+G GK+GS
Sbjct: 347 GPAGSKGESGNKGEPGAVGQPGPPGPSGEEGKRGS 381
Score = 32.7 bits (73), Expect = 1.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
++GP G GP G G GA GP G G+KG
Sbjct: 816 LRGPRGDQGPVGRSGETGASGPPGFVGEKG 845
Score = 32.3 bits (72), Expect = 1.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP+G +GP G PG PG G G G G
Sbjct: 245 GPIGSAGPPGFPGAPGPKGELGPVGNPG 272
Score = 32.3 bits (72), Expect = 1.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G +G+PG+ GA G G SG G
Sbjct: 611 GPPGPDGNKGEPGVVGAPGTAGPSGPSG 638
Score = 32.3 bits (72), Expect = 1.7
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G SG G PG PG G GL G +G
Sbjct: 794 GPPGPSGISGPPGPPGPAGKEGLRGPRG 821
Score = 32.3 bits (72), Expect = 1.7
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+ GPRGD G G G TG SG G
Sbjct: 812 GKEGLRGPRGDQGPVGRSGETGASGPPG 839
Score = 32.0 bits (71), Expect = 2.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
+ GPVG G G G+PGA G GL G G+
Sbjct: 288 LSGPVGPPGNPGANGLPGAKGAAGLPGVAGA 318
Score = 32.0 bits (71), Expect = 2.2
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
I GPVG +G G G+ G GP G G+ G+
Sbjct: 327 IPGPVGAAGATGARGLVGEPGPAGSKGESGN 357
Score = 32.0 bits (71), Expect = 2.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+GP G GP G+ G PG +G G +G G
Sbjct: 607 RGPSGPPGPDGNKGEPGVVGAPGTAGPSG 635
Score = 32.0 bits (71), Expect = 2.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G+ G RG GIPG G G +G +G
Sbjct: 635 GPSGLPGERGAAGIPGGKGEKGETGLRG 662
Score = 32.0 bits (71), Expect = 2.2
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+ G VG GP G G PGA GP G G G N
Sbjct: 885 VAGSVGEPGPLGIAGPPGARGPPGNVGNPGVN 916
Score = 31.6 bits (70), Expect = 2.9
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+GP G G GD GIPG GP G G G
Sbjct: 44 RGPPGPPGRDGDDGIPGPPGPPGPPGPPG 72
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G+ G G G+PGA G G+ G GS
Sbjct: 392 GPPGLRGNPGSRGLPGADGRAGVMGPAGS 420
Score = 31.6 bits (70), Expect = 2.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+ G G +GP G G+PG G G+ G KG
Sbjct: 624 VVGAPGTAGPSGPSGLPGERGAAGIPGGKG 653
Score = 31.2 bits (69), Expect = 3.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
I+G G+ G +G PG PG G G G+ G+
Sbjct: 177 IRGHNGLDGLKGQPGAPGVKGEPGAPGENGT 207
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
+G VG GP G G G++GP G +G GS
Sbjct: 220 RGRVGAPGPAGARGSDGSVGPVGPAGPIGS 249
Score = 31.2 bits (69), Expect = 3.8
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+SGP G PG PGA G G G G
Sbjct: 284 GLPGLSGPVGPPGNPGANGLPGAKGAAG 311
Score = 31.2 bits (69), Expect = 3.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+G G GP+G+ G G GP G +G G N
Sbjct: 736 KGERGTKGPKGENGPVGPTGPVGAAGPSGPN 766
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GPVG +GP G G PG G G G G+
Sbjct: 755 GPVGAAGPSGPNGPPGPAGSRGDGGPPGA 783
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G +GP G GI G GP G +GK+G
Sbjct: 788 GAAGRTGPPGPSGISGPPGPPGPAGKEG 815
Score = 31.2 bits (69), Expect = 3.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G +G G PG GP G G +G
Sbjct: 836 GPPGFVGEKGPSGEPGTAGPPGTPGPQG 863
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
I GP G GP G+ G PG G G +G+ G+
Sbjct: 897 IAGPPGARGPPGNVGNPGVNGAPGEAGRDGN 927
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G G RG PG GA GP G +G +G
Sbjct: 665 GSPGRDGARGAPGAIGAPGPAGANGDRG 692
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +G RG+ G G GP G G G
Sbjct: 683 GPAGANGDRGEAGPAGPAGPAGPRGSPG 710
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+GP G +GP G G GA GP+G +G G
Sbjct: 742 KGPKGENGPVGPTGPVGAAGPSGPNGPPG 770
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GPVG +GP G G G GP G +G +G
Sbjct: 749 GPVGPTGPVGAAGPSGPNGPPGPAGSRG 776
Score = 30.4 bits (67), Expect = 6.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G +G RG PG PG G G GK G
Sbjct: 122 GQTGPAGARGPPGPPGKAGEDGHPGKPG 149
Score = 30.4 bits (67), Expect = 6.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
++G G G +G+PG PG G G +G +G
Sbjct: 186 LKGQPGAPGVKGEPGAPGENGTPGQTGARG 215
Score = 30.4 bits (67), Expect = 6.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 162 GISGPRGDPGIPGAIGPTGLSGKKGS 239
G GP GDPG G G GL+G +G+
Sbjct: 494 GPKGPSGDPGKAGEKGHAGLAGARGA 519
Score = 30.4 bits (67), Expect = 6.5
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 12/40 (30%)
Frame = +3
Query: 153 GPVGISGPRGDP------------GIPGAIGPTGLSGKKG 236
GP+G GP G P G PG GP+G SG G
Sbjct: 602 GPIGSRGPSGPPGPDGNKGEPGVVGAPGTAGPSGPSGLPG 641
Score = 30.4 bits (67), Expect = 6.5
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +3
Query: 153 GPVGISGPRGDPGI---PGAIGPTGLSGKKG 236
G VG GP G+PG PG GP GL G G
Sbjct: 839 GFVGEKGPSGEPGTAGPPGTPGPQGLLGAPG 869
Score = 30.0 bits (66), Expect = 8.5
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +3
Query: 150 QGPVGISGPRGD---PGIPGAIGPTGLSGKKG 236
+GP G GPRG+ PG PG G G+ G G
Sbjct: 32 KGPSGDRGPRGERGPPGPPGRDGDDGIPGPPG 63
Score = 30.0 bits (66), Expect = 8.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QGP G+ G +G G G GP G G G
Sbjct: 529 QGPPGLQGVQGGKGEQGPAGPPGFQGLPG 557
Score = 30.0 bits (66), Expect = 8.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP+G G PG +G G G++G
Sbjct: 854 GPPGTPGPQGLLGAPGFLGLPGSRGERG 881
>sp|Q28668|CO1A2_RABIT Collagen alpha 2(I) chain precursor
Length = 526
Score = 116 bits (291), Expect = 7e-26
Identities = 83/258 (32%), Positives = 120/258 (46%), Gaps = 25/258 (9%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSNXXXXXXXXXXXXXXXXXXXX---------- 302
GP G +G G G PG +GP GL G +GS
Sbjct: 217 GPTGPAGKDGRSGHPGTVGPAGLRGSQGSQGPAGPPGPPGPPGPPGASGGGYDFGYDGDF 276
Query: 303 IMAMQLRSPT--KGVVYGDDPAAAELLGNNAIKN---PQGTKEVPARTCKQLSSENPNIP 467
A Q RSP + Y D L NN I+ P+G+++ PARTC+ L +P
Sbjct: 277 YRADQPRSPPSLRPKDYEVDATLKSL--NNQIETLLTPEGSRKNPARTCRDLRLSHPEWS 334
Query: 468 DGEYWIDPNGGRTSDAVKVFCKISEEKTCIKPLSKEISIRSW-NSPITKGHTWLKSLLN- 641
G YWIDPN G T DA+KV+C S +TCI+ + IS+++W S K H WL +N
Sbjct: 335 SGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPENISVKNWYKSSKAKKHVWLGETING 394
Query: 642 SDEIQYSIPN-------GQLAFLKIYSDAATQRITFACENHPIIGNEEKVNKVMAPRLLA 800
+ +Y++ QLAF+++ ++ A+Q IT+ C+N +EE N A L
Sbjct: 395 GTQFEYNVEGVTSKEMATQLAFMRLLANHASQNITYHCKNSIAYMDEETGNLNKAVILQG 454
Query: 801 DDDT-IIKMTQSKLKYTV 851
+D ++ S+ YTV
Sbjct: 455 SNDVELVAEGNSRFTYTV 472
Score = 37.4 bits (85), Expect = 0.053
Identities = 18/31 (58%), Positives = 19/31 (61%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+GP G G RGD G PG GP GL G KG N
Sbjct: 156 RGPSGPQGIRGDKGEPGDKGPRGLPGIKGHN 186
Score = 37.0 bits (84), Expect = 0.069
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G RG+PG G+IGP G +G +G
Sbjct: 130 GPTGKHGNRGEPGPAGSIGPVGAAGPRG 157
Score = 36.6 bits (83), Expect = 0.091
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP+GI+GP G G PGA+G G++G G
Sbjct: 55 GPLGIAGPPGARGPPGAVGSPGVNGAPG 82
Score = 36.6 bits (83), Expect = 0.091
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+QG G++G GD G PGA+GP G G G
Sbjct: 188 LQGLPGLAGQHGDQGAPGAVGPAGPRGPAG 217
Score = 31.6 bits (70), Expect = 2.9
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+ G +G GP G G PGA GP G G G N
Sbjct: 47 VAGALGEPGPLGIAGPPGARGPPGAVGSPGVN 78
Score = 30.4 bits (67), Expect = 6.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP+G G PG +G G G++G
Sbjct: 16 GPPGTPGPQGLLGAPGILGLPGSRGERG 43
Score = 30.4 bits (67), Expect = 6.5
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
I GP G GP G G PG G G +G+ G+
Sbjct: 59 IAGPPGARGPPGAVGSPGVNGAPGEAGRDGN 89
Score = 30.4 bits (67), Expect = 6.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP G G G GP G+ G KG
Sbjct: 142 GPAGSIGPVGAAGPRGPSGPQGIRGDKG 169
Score = 30.0 bits (66), Expect = 8.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
G G +GP G PG G +G G+ G GS
Sbjct: 10 GEAGTAGPPGTPGPQGLLGAPGILGLPGS 38
>sp|O46392|CO1A2_CANFA Collagen alpha 2(I) chain precursor
Length = 1366
Score = 112 bits (280), Expect = 1e-24
Identities = 84/263 (31%), Positives = 122/263 (46%), Gaps = 29/263 (11%)
Frame = +3
Query: 150 QGPVGISGPRGDPGI---PGAIGPTGLSGKKGSNXXXXXXXXXXXXXXXXXXXX------ 302
+GP G SGP G G PG +GP G+ G +GS
Sbjct: 1053 RGPAGPSGPAGKDGRTGQPGTVGPAGIRGSQGSQGPAGPPGPPGPPGPPGPSGGGYDFGY 1112
Query: 303 ----IMAMQLRSPT--KGVVYGDDPAAAELLGNNAIKN---PQGTKEVPARTCKQLSSEN 455
A Q RSP + Y D L NN I+ P+G+++ PARTC+ L +
Sbjct: 1113 EGDFYRADQPRSPPSLRPKDYEVDATLKSL--NNQIETLLTPEGSRKNPARTCRDLRLSH 1170
Query: 456 PNIPDGEYWIDPNGGRTSDAVKVFCKISEEKTCIKPLSKEISIRSW--NSPITKGHTWLK 629
P G YWIDPN G T DA+KV+C S +TCI+ + I ++W NS + K H WL
Sbjct: 1171 PEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPENIPAKNWYRNSKVKK-HIWLG 1229
Query: 630 SLLN-SDEIQYSIPN-------GQLAFLKIYSDAATQRITFACENHPIIGNEEKVNKVMA 785
+N + +Y++ QLAF+++ ++ A+Q IT+ C+N +EE N A
Sbjct: 1230 ETINGGTQFEYNVEGVTTKEMATQLAFMRLLANHASQNITYHCKNSIAYMDEETGNLKKA 1289
Query: 786 PRLLADDDT-IIKMTQSKLKYTV 851
L +D ++ S+ YTV
Sbjct: 1290 VILQGSNDVELVAEGNSRFTYTV 1312
Score = 40.4 bits (93), Expect = 0.006
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
GP G +GPRG+ G+PG GP G G G+N
Sbjct: 274 GPAGPAGPRGEVGLPGVSGPVGPPGNPGAN 303
Score = 39.3 bits (90), Expect = 0.014
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP+G+ GPRG PG GA GP G G G
Sbjct: 91 GPMGLMGPRGPPGASGAPGPQGFQGPAG 118
Score = 38.1 bits (87), Expect = 0.031
Identities = 18/31 (58%), Positives = 19/31 (61%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+GP G G RGD G PG GP GL G KG N
Sbjct: 996 RGPSGPQGIRGDKGEPGEKGPRGLPGLKGHN 1026
Score = 37.4 bits (85), Expect = 0.053
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP G+PG PG GP G G G
Sbjct: 109 GPQGFQGPAGEPGEPGQTGPAGARGPPG 136
Score = 37.0 bits (84), Expect = 0.069
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+ GPRG PG PG +GP G G G
Sbjct: 442 GEPGLMGPRGFPGAPGNVGPAGKEGPMG 469
Score = 36.6 bits (83), Expect = 0.091
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 153 GPVGISGPRGD---PGIPGAIGPTGLSGKKGS 239
GP G+ GP GD PG PG +GP G G G+
Sbjct: 427 GPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGN 458
Score = 36.6 bits (83), Expect = 0.091
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP+GI+GP G G PGA+G G++G G
Sbjct: 895 GPLGIAGPPGARGPPGAVGAPGVNGAPG 922
Score = 36.2 bits (82), Expect = 0.12
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +3
Query: 153 GPVGISGPRGDP---GIPGAIGPTGLSGKKG 236
GP+G +G RG+P G PG GPTG GK G
Sbjct: 478 GPIGPAGARGEPGNIGFPGPKGPTGDPGKNG 508
Score = 35.8 bits (81), Expect = 0.15
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +GPRG PG G +GP G +G G
Sbjct: 700 GPAGPAGPRGTPGERGEVGPAGPNGFAG 727
Score = 35.4 bits (80), Expect = 0.20
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
GP G +GP G G PGA G G G KG N
Sbjct: 721 GPNGFAGPAGAAGQPGAKGERGTKGPKGEN 750
Score = 35.4 bits (80), Expect = 0.20
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G RG+PG G++GP G G +G
Sbjct: 970 GPTGKHGNRGEPGPAGSVGPVGAVGPRG 997
Score = 35.4 bits (80), Expect = 0.20
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+QG G++G GD G PG++GP G G G
Sbjct: 1028 LQGLPGLAGQHGDQGAPGSVGPAGPRGPAG 1057
Score = 35.0 bits (79), Expect = 0.26
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 153 GPVGISGPRGDPGI---PGAIGPTGLSGKKGS 239
GP G GP G PGI PG IGP G G+ G+
Sbjct: 460 GPAGKEGPMGLPGIDGRPGPIGPAGARGEPGN 491
Score = 34.7 bits (78), Expect = 0.34
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+ GP G G RG PG GA GP+G G +G
Sbjct: 581 LPGPAGPRGERGPPGESGAAGPSGPIGSRG 610
Score = 34.3 bits (77), Expect = 0.45
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G SG G PG PGA G GL G +G
Sbjct: 796 GPPGPSGITGPPGPPGAAGKEGLRGPRG 823
Score = 33.9 bits (76), Expect = 0.59
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+SGP G PG PGA G TG G G
Sbjct: 286 GLPGVSGPVGPPGNPGANGLTGAKGAAG 313
Score = 33.9 bits (76), Expect = 0.59
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G+ G G G+PGA GP G+ G G
Sbjct: 394 GPPGLRGSPGSRGLPGADGPAGVMGPPG 421
Score = 33.9 bits (76), Expect = 0.59
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
++GP G GP G G GA GP G +G+KG
Sbjct: 818 LRGPRGDQGPVGRTGETGASGPPGFTGEKG 847
Score = 33.1 bits (74), Expect = 1.0
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 153 GPVGISGP---RGDPGIPGAIGPTGLSGKKGS 239
GPVG +GP G PG PGA GP G G G+
Sbjct: 241 GPVGPAGPIGSAGPPGFPGAPGPKGEIGPVGN 272
Score = 33.1 bits (74), Expect = 1.0
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 153 GPVGISGPRGDPGIP---GAIGPTGLSGKKG 236
GP+G +GP G PG P G IGP G G G
Sbjct: 247 GPIGSAGPPGFPGAPGPKGEIGPVGNPGPAG 277
Score = 33.1 bits (74), Expect = 1.0
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G SG +G+PG GA GP G SG++G
Sbjct: 352 GSKGESGNKGEPGSAGAQGPPGPSGEEG 379
Score = 33.1 bits (74), Expect = 1.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+QG G GP G PG G GP G +G+ G
Sbjct: 539 VQGGKGEQGPAGPPGFQGLPGPAGTAGEVG 568
Score = 33.1 bits (74), Expect = 1.0
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +G RGD G PGA G G +G+ G
Sbjct: 769 GPPGPAGSRGDGGPPGATGFPGAAGRTG 796
Score = 32.7 bits (73), Expect = 1.3
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
I GPVG +G G GI G GP G G+ G+
Sbjct: 329 IPGPVGAAGATGARGIVGEPGPAGSKGESGN 359
Score = 32.7 bits (73), Expect = 1.3
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+ GPRGD G G G TG SG G
Sbjct: 814 GKEGLRGPRGDQGPVGRTGETGASGPPG 841
Score = 32.3 bits (72), Expect = 1.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +G +G G PG GP G G +G
Sbjct: 838 GPPGFTGEKGPSGEPGTAGPPGTPGPQG 865
Score = 32.3 bits (72), Expect = 1.7
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+ G VG GP G G PGA GP G G G N
Sbjct: 887 VAGSVGEPGPLGIAGPPGARGPPGAVGAPGVN 918
Score = 32.0 bits (71), Expect = 2.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G +G+PG+ GA G G SG G
Sbjct: 613 GPPGPDGNKGEPGVLGAPGTAGASGPGG 640
Score = 32.0 bits (71), Expect = 2.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G +GP G GI G GP G +GK+G
Sbjct: 790 GAAGRTGPPGPSGITGPPGPPGAAGKEG 817
Score = 31.6 bits (70), Expect = 2.9
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+GP G G GD GIPG GP G G G
Sbjct: 44 RGPPGPPGRDGDDGIPGPPGPPGPPGPPG 72
Score = 31.6 bits (70), Expect = 2.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+GP G GP G+ G PG +G G +G G
Sbjct: 609 RGPSGPPGPDGNKGEPGVLGAPGTAGASG 637
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G+ G RG GIPG G G +G +G
Sbjct: 637 GPGGLPGERGAAGIPGGKGEKGETGLRG 664
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GPVG +GP G G G GP G +G +G
Sbjct: 751 GPVGPTGPIGSAGPSGPNGPPGPAGSRG 778
Score = 31.2 bits (69), Expect = 3.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
I+G G+ G +G PG PG G G G+ G+
Sbjct: 179 IRGHNGLDGLKGQPGAPGVKGEPGAPGENGT 209
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
+G VG GP G G G++GP G +G GS
Sbjct: 222 RGRVGAPGPAGARGSDGSVGPVGPAGPIGS 251
Score = 31.2 bits (69), Expect = 3.8
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 6/36 (16%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGI------PGAIGPTGLSGKKG 236
++GP G SG G+PG+ PGA G G +GK+G
Sbjct: 431 VRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEG 466
Score = 30.8 bits (68), Expect = 5.0
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +3
Query: 150 QGPVGISGPRGD---PGIPGAIGPTGLSGKKG 236
+GP G GPRG+ PG PG G G+ G G
Sbjct: 32 KGPTGDRGPRGERGPPGPPGRDGDDGIPGPPG 63
Score = 30.8 bits (68), Expect = 5.0
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 6/36 (16%)
Frame = +3
Query: 150 QGPVGISG------PRGDPGIPGAIGPTGLSGKKGS 239
QGP G SG P G+ G G GP GL G GS
Sbjct: 369 QGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGS 404
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
GP G+ GP PG GA GP G+ G G +
Sbjct: 412 GPAGVMGP---PGPRGATGPAGVRGPNGDS 438
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G G RG PG GA GP G +G +G
Sbjct: 667 GNPGRDGARGAPGAMGAPGPAGATGDRG 694
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
I GP G GP G G PG G G +G+ G+
Sbjct: 899 IAGPPGARGPPGAVGAPGVNGAPGEAGRDGN 929
Score = 30.4 bits (67), Expect = 6.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G +G RG PG PG G G GK G
Sbjct: 124 GQTGPAGARGPPGPPGKAGEDGHPGKPG 151
Score = 30.4 bits (67), Expect = 6.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
++G G G +G+PG PG G G +G +G
Sbjct: 188 LKGQPGAPGVKGEPGAPGENGTPGQTGARG 217
Score = 30.4 bits (67), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G +GP G PG+ G+ G GL G G
Sbjct: 385 GEAGSAGPSGPPGLRGSPGSRGLPGADG 412
Score = 30.4 bits (67), Expect = 6.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +G RG+ G G GP G G G
Sbjct: 685 GPAGATGDRGEAGPAGPAGPAGPRGTPG 712
Score = 30.4 bits (67), Expect = 6.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+G G GP+G+ G G GP G +G G N
Sbjct: 738 KGERGTKGPKGENGPVGPTGPIGSAGPSGPN 768
Score = 30.4 bits (67), Expect = 6.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP+G +GP G G PG G G G G+
Sbjct: 757 GPIGSAGPSGPNGPPGPAGSRGDGGPPGA 785
Score = 30.4 bits (67), Expect = 6.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP+G G PG +G G G++G
Sbjct: 856 GPPGTPGPQGLLGAPGILGLPGSRGERG 883
Score = 30.0 bits (66), Expect = 8.5
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
G G +GPRG+ G PG G G SG GS
Sbjct: 580 GLPGPAGPRGERGPPGESGAAGPSGPIGS 608
Score = 30.0 bits (66), Expect = 8.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP+G GP G PG G G G+ G G+
Sbjct: 604 GPIGSRGPSGPPGPDGNKGEPGVLGAPGT 632
Score = 30.0 bits (66), Expect = 8.5
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G SGP G PG GA G G G+KG
Sbjct: 631 GTAGASGPGGLPGERGAAGIPGGKGEKG 658
Score = 30.0 bits (66), Expect = 8.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP G G G GP G+ G KG
Sbjct: 982 GPAGSVGPVGAVGPRGPSGPQGIRGDKG 1009
>sp|P02460|CA12_CHICK Collagen alpha 1(II) chain precursor
Length = 369
Score = 110 bits (274), Expect = 6e-24
Identities = 74/252 (29%), Positives = 112/252 (44%), Gaps = 19/252 (7%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS----NXXXXXXXXXXXXXXXXXXXXIMAMQL 320
GP+G GPRG G PG GP G G G I M+
Sbjct: 64 GPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSAFAGLGQTEKGPDPIRYMRA 123
Query: 321 RSPTKGVVYGDDPAAAELLGNN----AIKNPQGTKEVPARTCKQLSSENPNIPDGEYWID 488
G+ D A L N +I++P+G+K+ PARTC+ + +P G+YWID
Sbjct: 124 DEAAGGLRQHDVEVDATLKSLNNQIESIRSPEGSKKNPARTCRDIKLCHPEWKSGDYWID 183
Query: 489 PNGGRTSDAVKVFCKISEEKTCIKPLSKEISIRSWNSPITKG--HTWLKSLLN------- 641
PN G T DA+KVFC + +TC+ P I ++W + TK H W +N
Sbjct: 184 PNQGCTLDAIKVFCNMETGETCVYPTPSSIPRKNWWTSKTKDKKHVWFAETINGGFHFSY 243
Query: 642 -SDEIQYSIPNGQLAFLKIYSDAATQRITFACENHPIIGNEEKVNKVMAPRLLADDDTII 818
+ + + + Q+ FL++ S +Q +T+ C+N +EE N A + +D I
Sbjct: 244 GDENLSPNTASIQMTFLRLLSTEGSQNVTYHCKNSIAYMDEETGNLKKAILIQGSNDVEI 303
Query: 819 KMT-QSKLKYTV 851
+ S+ Y+V
Sbjct: 304 RAEGNSRFTYSV 315
Score = 35.0 bits (79), Expect = 0.26
Identities = 18/30 (60%), Positives = 18/30 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
GP G SGPRG PG P G SGK GSN
Sbjct: 37 GPAGPSGPRGPPG------PVGPSGKDGSN 60
Score = 34.3 bits (77), Expect = 0.45
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QG G +GP G G PG +GP+G G G
Sbjct: 33 QGAAGPAGPSGPRGPPGPVGPSGKDGSNG 61
Score = 30.4 bits (67), Expect = 6.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+ GP G G GA GP G SG +G
Sbjct: 19 GLQGLPGPPGPSGDQGAAGPAGPSGPRG 46
>sp||P12105_3 [Segment 3 of 3] Collagen alpha 1(III) chain precursor
Length = 340
Score = 109 bits (273), Expect = 8e-24
Identities = 81/257 (31%), Positives = 118/257 (45%), Gaps = 24/257 (9%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSNXXXXXXXXXXXXXXXXXXXXIMAMQLRSPT 332
GP+G GPRG+ G G GP G G G + + A +
Sbjct: 37 GPIGPPGPRGNRGESGPAGPPGQPGLPGPSGPPGPCCGGGVAS-------LGAGEKGPVG 89
Query: 333 KGVVYGDDPAAAEL-LG---------NNAIKN---PQGTKEVPARTCKQLSSENPNIPDG 473
G Y D+P E+ LG NN I+N P G+++ PAR C+ L +P + G
Sbjct: 90 YGYEYRDEPKENEINLGEIMSSMKSINNQIENILSPDGSRKNPARNCRDLKFCHPELKSG 149
Query: 474 EYWIDPNGGRTSDAVKVFCKISEEKTCIKPLSKEISIRSWNSPITKG--HTWL-KSLLNS 644
EYWIDPN G DA+KV+C + +TC+ + ++W + + G H W +S+
Sbjct: 150 EYWIDPNQGCKMDAIKVYCNMETGETCLSANPATVPRKNWWTTESSGKKHVWFGESMKGG 209
Query: 645 DEIQYSIPN-------GQLAFLKIYSDAATQRITFACENHPIIGNEEKVNKVMAPRLLAD 803
+ Y P+ QLAFL+I S A+Q IT+ C+N N+ N A +L++
Sbjct: 210 FQFSYGDPDLPEDVSEVQLAFLRILSSRASQNITYHCKNSIAYMNQASGNVKKALKLMSS 269
Query: 804 DDTIIKMT-QSKLKYTV 851
+T IK SK Y V
Sbjct: 270 VETDIKAEGNSKYMYAV 286
>sp|P18856|CAF1_EPHMU Collagen EMF1-alpha precursor (Fibrillar collagen)
Length = 547
Score = 107 bits (266), Expect = 5e-23
Identities = 71/213 (33%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSNXXXXXXXXXXXXXXXXXXXXIMAMQ-LRSP 329
GP G GPRG G G G G G +GS + RSP
Sbjct: 266 GPTGAQGPRGGQGPKGPAGAVGDVGDRGSTGPAGPPGPPGPTGGGIILVPVNDQNPTRSP 325
Query: 330 TKGVVY--GDDPAAAELLGNNA-----------IKNPQGTKEVPARTCKQLSSENPNIPD 470
G V+ G LG+ A +K+P GTK+ PAR+C L E+ + D
Sbjct: 326 VSGSVFYRGQAEETDVNLGSVADVIELHKKLQHLKSPTGTKDSPARSCHDLFLEDNSTSD 385
Query: 471 GEYWIDPNGGRTSDAVKVFCKIS--EEKTCIKPLSKEISIRSWNSPITKGHT-WLKSLLN 641
G YWIDPNGG DAVKVFC + ++TCI ++SW+ GH+ W +L
Sbjct: 386 GYYWIDPNGGCIGDAVKVFCNFTGGVQQTCISATKNAGDLKSWS-----GHSIWFSDMLG 440
Query: 642 SDEIQYSIPNGQLAFLKIYSDAATQRITFACEN 740
++ Y I QL F++ S A Q T+ C N
Sbjct: 441 GFKLTYDISRSQLQFIRAASRHAVQSFTYKCRN 473
Score = 34.7 bits (78), Expect = 0.34
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+ G G GP G+PG+PG G +G SG G
Sbjct: 20 LDGAPGAQGPDGEPGLPGLPGQSGKSGASG 49
Score = 32.3 bits (72), Expect = 1.7
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +GP G G PGA GP G G G
Sbjct: 10 GPAGPTGPAGLDGAPGAQGPDGEPGLPG 37
Score = 32.0 bits (71), Expect = 2.2
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 162 GISGPRGDPGIPGAIGPTGLSGKKGS 239
G+ GP GD G G GP GL G G+
Sbjct: 1 GVPGPNGDVGPAGPTGPAGLDGAPGA 26
Score = 31.2 bits (69), Expect = 3.8
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
+ G G SG G PG+PG P G +GK GS
Sbjct: 38 LPGQSGKSGASGQPGVPG---PVGAAGKPGS 65
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +G RG G PG G G+ G KG
Sbjct: 143 GPKGQAGERGPQGTPGTQGSKGVVGPKG 170
Score = 30.4 bits (67), Expect = 6.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G G G PG GA+GP G +G++G
Sbjct: 125 GYPGFDGVAGKPGPQGAMGPKGQAGERG 152
Score = 30.4 bits (67), Expect = 6.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
QG G+ GP+G G G G TG +G+KG+
Sbjct: 160 QGSKGVVGPKGVVGPQGDSGDTGDAGQKGA 189
Score = 30.0 bits (66), Expect = 8.5
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +3
Query: 153 GPVGISGPRGDP---GIPGAIGPTGLSGKKG 236
GP G +GP G P G+ G GP G G KG
Sbjct: 116 GPDGAAGPSGYPGFDGVAGKPGPQGAMGPKG 146
>sp|P02458|CO2A1_HUMAN Collagen alpha 1(II) chain precursor [Contains: Chondrocalcin]
Length = 1418
Score = 105 bits (261), Expect = 2e-22
Identities = 77/266 (28%), Positives = 113/266 (42%), Gaps = 34/266 (12%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSNXXXXXXXXXXXXXXXXXXXXIMAMQLRSPT 332
GPVG SG G GIPG IGP G G+ G + M +
Sbjct: 1098 GPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGL 1157
Query: 333 KGVVYGDDP---------------------AAAELLGNN--AIKNPQGTKEVPARTCKQL 443
G DP A + L N +I++P+G+++ PARTC+ L
Sbjct: 1158 GpreKGPDPLQYMRADQAAGGLRQHDAEVDATLKSLNNQIESIRSPEGSRKNPARTCRDL 1217
Query: 444 SSENPNIPDGEYWIDPNGGRTSDAVKVFCKISEEKTCIKPLSKEISIRSWNSPIT--KGH 617
+P G+YWIDPN G T DA+KVFC + +TC+ P + ++W S + K H
Sbjct: 1218 KLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPANVPKKNWWSSKSKEKKH 1277
Query: 618 TWLKSLLN--------SDEIQYSIPNGQLAFLKIYSDAATQRITFACENHPIIGNEEKVN 773
W +N D + + N Q+ FL++ S +Q IT+ C+N +E N
Sbjct: 1278 IWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNITYHCKNSIAYLDEAAGN 1337
Query: 774 KVMAPRLLADDDTIIKMT-QSKLKYT 848
A + +D I+ S+ YT
Sbjct: 1338 LKKALLIQGSNDVEIRAEGNSRFTYT 1363
Score = 43.5 bits (101), Expect = 7e-04
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+GP G GPRG+PG PG+ GP G SG G++
Sbjct: 314 RGPEGAQGPRGEPGTPGSPGPAGASGNPGTD 344
Score = 39.3 bits (90), Expect = 0.014
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+QGP+G GPRG PG GA GP G G G
Sbjct: 130 MQGPMGPMGPRGPPGPAGAPGPQGFQGNPG 159
Score = 37.4 bits (85), Expect = 0.053
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
+G G GP+G G PG GPTG++G KG+
Sbjct: 788 KGDAGAPGPQGPSGAPGPQGPTGVTGPKGA 817
Score = 37.0 bits (84), Expect = 0.069
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+ GPRG PG PG GP G SG G
Sbjct: 642 GAQGLQGPRGLPGTPGTDGPKGASGPAG 669
Score = 34.7 bits (78), Expect = 0.34
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G VG G G PG PG GPTG G +G
Sbjct: 993 GAVGAPGAPGPPGSPGPAGPTGKQGDRG 1020
Score = 34.3 bits (77), Expect = 0.45
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+ GP+G GP G PG PG G G GK G
Sbjct: 166 VSGPMGPRGPPGPPGKPGDDGEAGKPGKAG 195
Score = 34.3 bits (77), Expect = 0.45
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G G RG G PG +GP G G++G+
Sbjct: 414 GPAGEEGKRGARGEPGGVGPIGPPGERGA 442
Score = 34.3 bits (77), Expect = 0.45
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+G GI+GP+GD G G GP G GK G
Sbjct: 686 RGAAGIAGPKGDRGDVGEKGPEGAPGKDG 714
Score = 34.3 bits (77), Expect = 0.45
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
+G VG+ G RG+ G PG GP+G G++G+
Sbjct: 911 RGIVGLPGQRGERGFPGLPGPSGEPGQQGA 940
Score = 34.3 bits (77), Expect = 0.45
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +3
Query: 153 GPVGISGPRGDP---GIPGAIGPTGLSGKKG 236
GP G++GP G+P G PGA GP G G G
Sbjct: 954 GPPGLTGPAGEPGREGSPGADGPPGRDGAAG 984
Score = 34.3 bits (77), Expect = 0.45
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QGP+G SGP G GI G GP G G+ G
Sbjct: 1025 QGPMGPSGPAGARGIQGPQGPRGDKGEAG 1053
Score = 33.9 bits (76), Expect = 0.59
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGA------IGPTGLSGKKGS 239
GP G GP G PG PGA GPTG G +G+
Sbjct: 285 GPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGA 319
Score = 33.9 bits (76), Expect = 0.59
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+GP G++GP+G G PG G GL G +G
Sbjct: 464 RGPSGLAGPKGANGDPGRPGEPGLPGARG 492
Score = 33.9 bits (76), Expect = 0.59
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QGP G++GP+G G G G TG G G
Sbjct: 806 QGPTGVTGPKGARGAQGPPGATGFPGAAG 834
Score = 33.9 bits (76), Expect = 0.59
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
G VG G G+PG PG GP+G G KG+
Sbjct: 834 GRVGPPGSNGNPGPPGPPGPSGKDGPKGA 862
Score = 33.5 bits (75), Expect = 0.77
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 15/45 (33%)
Frame = +3
Query: 153 GPVGISGPRGDPG---------------IPGAIGPTGLSGKKGSN 242
GP+G G RG PG PG GP+GL+G KG+N
Sbjct: 432 GPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGAN 476
Score = 33.5 bits (75), Expect = 0.77
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G RG PG+ G GP G +G+ G
Sbjct: 519 GPPGPQGARGQPGVMGFPGPKGANGEPG 546
Score = 33.5 bits (75), Expect = 0.77
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G SGP G PG G G G+ G++G+
Sbjct: 660 GPKGASGPAGPPGAQGPPGLQGMPGERGA 688
Score = 33.1 bits (74), Expect = 1.0
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 150 QGPVGISGP---RGDPGIPGAIGPTGLSGKKGS 239
QGP G GP RGD G GA GP G G+ G+
Sbjct: 56 QGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGT 88
Score = 33.1 bits (74), Expect = 1.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP G G+PG G G++G KG
Sbjct: 669 GPPGAQGPPGLQGMPGERGAAGIAGPKG 696
Score = 33.1 bits (74), Expect = 1.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G RG+ G G +GP+G +G +G
Sbjct: 1011 GPTGKQGDRGEAGAQGPMGPSGPAGARG 1038
Score = 33.1 bits (74), Expect = 1.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QG G +GP G G PG +GP+G G G
Sbjct: 1082 QGASGPAGPSGPRGPPGPVGPSGKDGANG 1110
Score = 32.7 bits (73), Expect = 1.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+GP G +GP G+ G GA GP+G G G
Sbjct: 572 EGPPGPAGPAGERGEQGAPGPSGFQGLPG 600
Score = 32.7 bits (73), Expect = 1.3
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G GD G+PG G GL G +G
Sbjct: 603 GPPGEGGKPGDQGVPGEAGAPGLVGPRG 630
Score = 32.7 bits (73), Expect = 1.3
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +G RG PG G GP G SG G
Sbjct: 741 GPAGSAGARGAPGERGETGPPGTSGIAG 768
Score = 32.7 bits (73), Expect = 1.3
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 150 QGPVGISGPRGDPGI---PGAIGPTGLSGKKGS 239
QG G SG RG PG PG GP G G++GS
Sbjct: 938 QGAPGASGDRGPPGPVGPPGLTGPAGEPGREGS 970
Score = 32.3 bits (72), Expect = 1.7
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G G+PG PG GP G G G
Sbjct: 150 GPQGFQGNPGEPGEPGVSGPMGPRGPPG 177
Score = 32.3 bits (72), Expect = 1.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +G RG+ G PG GP G G G
Sbjct: 267 GPAGAAGARGNDGQPGPAGPPGPVGPAG 294
Score = 32.3 bits (72), Expect = 1.7
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
I G G GPRG P GA GP G G+ G
Sbjct: 358 IAGAPGFPGPRGPPDPQGATGPLGPKGQTG 387
Score = 32.3 bits (72), Expect = 1.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+ GP G +G G PG PG G GL+G+ G
Sbjct: 469 LAGPKGANGDPGRPGEPGLPGARGLTGRPG 498
Score = 32.3 bits (72), Expect = 1.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G G GD G PG +GP GL+G G
Sbjct: 936 GQQGAPGASGDRGPPGPVGPPGLTGPAG 963
Score = 32.3 bits (72), Expect = 1.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+G G G G PG PG+ GP G +GK+G
Sbjct: 989 RGETGAVGAPGAPGPPGSPGPAGPTGKQG 1017
Score = 32.3 bits (72), Expect = 1.7
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G +G +GD G GA GP G SG G+
Sbjct: 1008 GPAGPTGKQGDRGEAGAQGPMGPSGPAGA 1036
Score = 32.0 bits (71), Expect = 2.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G SG G+ G PG +GP GL G++G
Sbjct: 237 GVKGESGSPGENGSPGPMGPRGLPGERG 264
Score = 32.0 bits (71), Expect = 2.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
G G GPRG PG G GP G +G +G++
Sbjct: 249 GSPGPMGPRGLPGERGRTGPAGAAGARGND 278
Score = 32.0 bits (71), Expect = 2.2
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QG VG SG G+ G PG GP G G+ G
Sbjct: 503 QGKVGPSGAPGEDGRPGPPGPQGARGQPG 531
Score = 32.0 bits (71), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
+ GP+G GP G G G +GP G +G G+
Sbjct: 718 LTGPIGPPGPAGANGEKGEVGPPGPAGSAGA 748
Score = 32.0 bits (71), Expect = 2.2
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G GI+GP G G PGA G G +G+KG
Sbjct: 762 GTSGIAGPPGADGQPGAKGEQGEAGQKG 789
Score = 32.0 bits (71), Expect = 2.2
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
Frame = +3
Query: 147 IQGPVGISGPRGDP------GIPGAIGPTGLSGKKG 236
+QGP G G +G+P G G GP GL+G++G
Sbjct: 877 LQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRG 912
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP+G G PG G G+SG G
Sbjct: 144 GPAGAPGPQGFQGNPGEPGEPGVSGPMG 171
Score = 31.6 bits (70), Expect = 2.9
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G GPRG PG PG G G +GK G
Sbjct: 165 GVSGPMGPRGPPGPPGKPGDDGEAGKPG 192
Score = 31.6 bits (70), Expect = 2.9
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G SG G GIPGA G G G G+
Sbjct: 333 GPAGASGNPGTDGIPGAKGSAGAPGIAGA 361
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QGP G GP G G PG G G G +G
Sbjct: 398 QGPKGEPGPAGPQGAPGPAGEEGKRGARG 426
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+G G GP G G+PG GP G GK G
Sbjct: 584 RGEQGAPGPSGFQGLPGPPGPPGEGGKPG 612
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+G G G RG PG G GP GL G G++
Sbjct: 629 RGERGFPGERGSPGAQGLQGPRGLPGTPGTD 659
Score = 31.6 bits (70), Expect = 2.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+G G +G +GD G PG GP+G G +G
Sbjct: 779 KGEQGEAGQKGDAGAPGPQGPSGAPGPQG 807
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +G RG+ G PG G GL G G
Sbjct: 576 GPAGPAGERGEQGAPGPSGFQGLPGPPG 603
Score = 31.2 bits (69), Expect = 3.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+G G SGP G G PG GP G G+KG
Sbjct: 860 KGARGDSGPPGRAGEPGLQGPAGPPGEKG 888
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+ GPRG+ G PG G G G +G
Sbjct: 621 GAPGLVGPRGERGFPGERGSPGAQGLQG 648
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+QGP G+ G G G GA GP G G +G
Sbjct: 646 LQGPRGLPGTPGTDGPKGASGPAGPPGAQG 675
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
QGP G GP+G G+ G G G G G+
Sbjct: 797 QGPSGAPGPQGPTGVTGPKGARGAQGPPGA 826
Score = 30.8 bits (68), Expect = 5.0
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G GP G G PG GP G SGK G
Sbjct: 831 GAAGRVGPPGSNGNPGPPGPPGPSGKDG 858
Score = 30.8 bits (68), Expect = 5.0
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
IQGP GPRGD G G G GL G +G
Sbjct: 1039 IQGP---QGPRGDKGEAGEPGERGLKGHRG 1065
Score = 30.4 bits (67), Expect = 6.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 147 IQGPVGISGPRGDP---GIPGAIGPTGLSGKKGS 239
I G G GP+G+P G GA GP G GK+G+
Sbjct: 391 IAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGA 424
Score = 30.4 bits (67), Expect = 6.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP G PG G GP G G +G
Sbjct: 501 GPQGKVGPSGAPGEDGRPGPPGPQGARG 528
Score = 30.4 bits (67), Expect = 6.5
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+ GP G G +G PG G G G G GSN
Sbjct: 811 VTGPKGARGAQGPPGATGFPGAAGRVGPPGSN 842
Score = 30.4 bits (67), Expect = 6.5
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +3
Query: 153 GPVGISGP---RGDPGIPGAIGPTGLSGKKG 236
GP G GP RGD G PG G GL G G
Sbjct: 852 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAG 882
Score = 30.4 bits (67), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP G G+ G G GL G++G
Sbjct: 894 GPSGAEGPPGPQGLAGQRGIVGLPGQRG 921
Score = 30.4 bits (67), Expect = 6.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+QG G GP GD G G GP+G G G
Sbjct: 1069 LQGLPGPPGPSGDQGASGPAGPSGPRGPPG 1098
Score = 30.0 bits (66), Expect = 8.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G++G RG G+PG G G G G
Sbjct: 903 GPQGLAGQRGIVGLPGQRGERGFPGLPG 930
Score = 30.0 bits (66), Expect = 8.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+ GP G G GA GP G SG +G
Sbjct: 1068 GLQGLPGPPGPSGDQGASGPAGPSGPRG 1095
>sp|P12107|CA1B_HUMAN Collagen alpha 1(XI) chain precursor
Length = 1806
Score = 105 bits (261), Expect = 2e-22
Identities = 74/225 (32%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGP------TGLSGKKGSNXXXXXXXXXXXXXXXXXXXXIM 308
I GP G GP G PG+PG GP TG +G+KG + I+
Sbjct: 1490 IPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPGPPGEVIQPLPIL 1549
Query: 309 AMQ-LRSPTKGVVYGDDP-------AAAELLGN-NAIKN-------PQGTKEVPARTCKQ 440
+ + R T+G+ D E+ G+ N++K P GT+ PARTCK
Sbjct: 1550 SSKKTRRHTEGMQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKD 1609
Query: 441 LSSENPNIPDGEYWIDPNGGRTSDAVKVFCKI-SEEKTCIKPLSKEISIRSWNSPITKGH 617
L +P+ PDGEYWIDPN G + D+ KV+C S +TCI P K +R + P K
Sbjct: 1610 LQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPG 1669
Query: 618 TWLKSLLNSDEIQY------SIPNGQLAFLKIYSDAATQRITFAC 734
+W + Y SI Q+ FLK+ + +A Q T+ C
Sbjct: 1670 SWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHC 1714
Score = 37.4 bits (85), Expect = 0.053
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QGPVG GP+G PG PG G G G++G
Sbjct: 924 QGPVGFPGPKGPPGPPGKDGLPGHPGQRG 952
Score = 37.0 bits (84), Expect = 0.069
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
I GP G+ GP G PG PG GP G G G++
Sbjct: 452 IMGPPGLQGPTGPPGDPGDRGPPGRPGLPGAD 483
Score = 36.2 bits (82), Expect = 0.12
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
QGP G GP G GIPG +G GL G G +
Sbjct: 1398 QGPAGKPGPEGLRGIPGPVGEQGLPGAAGQD 1428
Score = 35.8 bits (81), Expect = 0.15
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G+ GPRG PG PG G G+ G G
Sbjct: 649 GPRGLLGPRGTPGAPGQPGMAGVDGPPG 676
Score = 34.7 bits (78), Expect = 0.34
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+QGPVG+ GP G G PG G G G+ G
Sbjct: 1106 VQGPVGLPGPAGPAGSPGEDGDKGEIGEPG 1135
Score = 34.3 bits (77), Expect = 0.45
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 6/37 (16%)
Frame = +3
Query: 150 QGPVGI---SGPRGDP---GIPGAIGPTGLSGKKGSN 242
QGP+G GP+G P G+PGA GP G GK+G +
Sbjct: 705 QGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQS 741
Score = 34.3 bits (77), Expect = 0.45
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
QGP+G GPRG G G G G G+KG +
Sbjct: 753 QGPIGYPGPRGVKGADGVRGLKGSKGEKGED 783
Score = 34.3 bits (77), Expect = 0.45
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
QGP G +GP G+ G PG GP G G G+
Sbjct: 972 QGPTGETGPIGERGYPGPPGPPGEQGLPGA 1001
Score = 34.3 bits (77), Expect = 0.45
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QGP G GP+G PG G++G G G+ G
Sbjct: 1230 QGPNGADGPQGPPGSVGSVGGVGEKGEPG 1258
Score = 33.9 bits (76), Expect = 0.59
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QGP G G +G G+PG GP G G+ G
Sbjct: 1098 QGPAGRDGVQGPVGLPGPAGPAGSPGEDG 1126
Score = 33.9 bits (76), Expect = 0.59
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G SG G PG PG GP G +G +G
Sbjct: 1345 GPPGPSGEAGPPGPPGKRGPPGAAGAEG 1372
Score = 33.9 bits (76), Expect = 0.59
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
++G G G +G PG+ G IGP G G+KG
Sbjct: 1442 LKGDPGSKGEKGHPGLIGLIGPPGEQGEKG 1471
Score = 33.5 bits (75), Expect = 0.77
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
++GP G +GP G G PG GPTG G G
Sbjct: 440 VEGPPGPAGPAGIMGPPGLQGPTGPPGDPG 469
Score = 33.5 bits (75), Expect = 0.77
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
GP G GP G G GA GPTG G KG++
Sbjct: 877 GPRGQRGPTGPRGSRGARGPTGKPGPKGTS 906
Score = 33.5 bits (75), Expect = 0.77
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP G+ G PG GP G +G+ G
Sbjct: 1078 GPQGPPGPAGEKGAPGEKGPQGPAGRDG 1105
Score = 33.5 bits (75), Expect = 0.77
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+ GP G G +G+ G PGA GP G G G +
Sbjct: 1271 VGGPKGERGEKGEAGPPGAAGPPGAKGPPGDD 1302
Score = 33.1 bits (74), Expect = 1.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+QGPVG G G G PG G G+ G+KG
Sbjct: 1154 LQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1183
Score = 33.1 bits (74), Expect = 1.0
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 147 IQGPVG---ISGPRGDPGIPGAIGPTGLSGKKG 236
I GPVG + G G G PG +GP GL G KG
Sbjct: 1412 IPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKG 1444
Score = 32.7 bits (73), Expect = 1.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+G G GP+G G+ G GPTG GK+G
Sbjct: 552 KGESGDPGPQGPRGVQGPPGPTGKPGKRG 580
Score = 32.7 bits (73), Expect = 1.3
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGA---IGPTGLSGKKG 236
GP G GP+G+PG PG GP GL G +G
Sbjct: 676 GPKGNMGPQGEPGPPGQQGNPGPQGLPGPQG 706
Score = 32.7 bits (73), Expect = 1.3
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G+ G G+ G+PGA G GL G +G
Sbjct: 1021 GPAGLRGFPGERGLPGAQGAPGLKGGEG 1048
Score = 32.3 bits (72), Expect = 1.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G+ GP G PGI G G G G++G
Sbjct: 1150 GPPGLQGPVGAPGIAGGDGEPGPRGQQG 1177
Score = 32.0 bits (71), Expect = 2.2
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G G RG PG PG G GL G G+
Sbjct: 463 GPPGDPGDRGPPGRPGLPGADGLPGPPGT 491
Score = 32.0 bits (71), Expect = 2.2
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QGP G+ GP G G PG G G G +G
Sbjct: 561 QGPRGVQGPPGPTGKPGKRGRPGADGGRG 589
Score = 32.0 bits (71), Expect = 2.2
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G GPRG G GA GP G G GS
Sbjct: 1219 GPPGPPGPRGPQGPNGADGPQGPPGSVGS 1247
Score = 32.0 bits (71), Expect = 2.2
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 9/38 (23%)
Frame = +3
Query: 150 QGPVGISGPR---------GDPGIPGAIGPTGLSGKKG 236
+GP G GP+ GDPG PG +GP G G G
Sbjct: 1296 KGPPGDDGPKGNPGPVGFPGDPGPPGELGPAGQDGVGG 1333
Score = 32.0 bits (71), Expect = 2.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G GP G PG+PG G G G+KG
Sbjct: 1426 GQDGPPGPMGPPGLPGLKGDPGSKGEKG 1453
Score = 31.6 bits (70), Expect = 2.9
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 150 QGPVGISGPRGDPGI---PGAIGPTGLSGKKG 236
+GP G GP GD G+ G IGP GL G+ G
Sbjct: 618 RGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAG 649
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G+ GP+G G PG GP G G G
Sbjct: 697 GPQGLPGPQGPIGPPGEKGPQGKPGLAG 724
Score = 31.6 bits (70), Expect = 2.9
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G SG G PG PG GP G G G
Sbjct: 901 GPKGTSGGDGPPGPPGERGPQGPQGPVG 928
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP+G G G PG PG G G +GK+G+
Sbjct: 979 GPIGERGYPGPPGPPGEQGLPGAAGKEGA 1007
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QGP G +G +G PG G GP G G +G
Sbjct: 1080 QGPPGPAGEKGAPGEKGPQGPAGRDGVQG 1108
Score = 31.6 bits (70), Expect = 2.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
G G+ GP+G+ G G GP G +G G+
Sbjct: 1267 GEAGVGGPKGERGEKGEAGPPGAAGPPGA 1295
Score = 31.6 bits (70), Expect = 2.9
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
+G G +GP G G PGA GP G G KG+
Sbjct: 1278 RGEKGEAGPPGAAGPPGAKGPPGDDGPKGN 1307
Score = 31.6 bits (70), Expect = 2.9
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 153 GPVGISGPRGDP---GIPGAIGPTGLSGKKGS 239
GP G +GP G P G PGA G G G+KG+
Sbjct: 1348 GPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGA 1379
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
+QGP G +G G G PGA G G+ G+ G+
Sbjct: 566 VQGPPGPTGKPGKRGRPGADGGRGMPGEPGA 596
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G G G+PG GP G G+KG
Sbjct: 688 GPPGQQGNPGPQGLPGPQGPIGPPGEKG 715
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+GP G +GP GDPG G G G G G
Sbjct: 813 EGPKGRAGPTGDPGPSGQAGEKGKLGVPG 841
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
+G G +GP G G PG GP G +G+KG+
Sbjct: 1062 RGSAGTAGPIGLRGRPGPQGPPGPAGEKGA 1091
Score = 31.2 bits (69), Expect = 3.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP+G+ G G G PG G G G+KG
Sbjct: 1069 GPIGLRGRPGPQGPPGPAGEKGAPGEKG 1096
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP GD G G GP G G G
Sbjct: 1291 GPPGAKGPPGDDGPKGNPGPVGFPGDPG 1318
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +G G PG+ G GP G G +G
Sbjct: 445 GPAGPAGIMGPPGLQGPTGPPGDPGDRG 472
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G +G +G G+PG G G G KGS
Sbjct: 826 GPSGQAGEKGKLGVPGLPGYPGRQGPKGS 854
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QGP G G G+ G G GP GL G+ G
Sbjct: 1050 QGPPGPVGSPGERGSAGTAGPIGLRGRPG 1078
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+ G +G+ G PG GP G SG+ G
Sbjct: 1327 GQDGVGGDKGEDGDPGQPGPPGPSGEAG 1354
Score = 30.8 bits (68), Expect = 5.0
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G RG PG GA G G G KG
Sbjct: 1354 GPPGPPGKRGPPGAAGAEGRQGEKGAKG 1381
Score = 30.4 bits (67), Expect = 6.5
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G GP G PG G G G+ G KGS
Sbjct: 748 GPPGPQGPIGYPGPRGVKGADGVRGLKGS 776
Score = 30.4 bits (67), Expect = 6.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G GP+G G PG GP G GK G
Sbjct: 916 GERGPQGPQGPVGFPGPKGPPGPPGKDG 943
Score = 30.4 bits (67), Expect = 6.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+G G +GP G PG+ G +G G++G G
Sbjct: 1140 KGGKGENGPPGPPGLQGPVGAPGIAGGDG 1168
Score = 30.4 bits (67), Expect = 6.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G VG GP G PG G GP G G +G
Sbjct: 1213 GDVGPMGPPGPPGPRGPQGPNGADGPQG 1240
Score = 30.4 bits (67), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+G G +G G PG G +GP G +GK G
Sbjct: 1377 KGAKGEAGAEGPPGKTGPVGPQGPAGKPG 1405
Score = 30.0 bits (66), Expect = 8.5
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 153 GPVG---ISGPRGDPGIPGAIGPTGLSGKKG 236
GPVG SG +G+ G PG GP G+ G G
Sbjct: 541 GPVGGPGSSGAKGESGDPGPQGPRGVQGPPG 571
Score = 30.0 bits (66), Expect = 8.5
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Frame = +3
Query: 153 GPVGISGPRGDPG------IPGAIGPTGLSGKKGS 239
GP G G RG+ G +PG GP GL G +G+
Sbjct: 625 GPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGT 659
Score = 30.0 bits (66), Expect = 8.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G GP+G PG G IGP G G +G
Sbjct: 691 GQQGNPGPQGLPGPQGPIGPPGEKGPQG 718
Score = 30.0 bits (66), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+G G G G PG G +GP G +G+ G
Sbjct: 951 RGETGFQGKTGPPGPGGVVGPQGPTGETG 979
Score = 30.0 bits (66), Expect = 8.5
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 9/38 (23%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAI---------GPTGLSGKKG 236
+G G GP G+ G+PGA GP G+SGK G
Sbjct: 984 RGYPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDG 1021
Score = 30.0 bits (66), Expect = 8.5
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLS---GKKGSN 242
G G G RG PG PG IG GL G+KG N
Sbjct: 1180 GQKGDEGARGFPGPPGPIGLQGLPGPPGEKGEN 1212
Score = 30.0 bits (66), Expect = 8.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+G G GP G PG PG GP G +G G
Sbjct: 1209 KGENGDVGPMGPPGPPGPRGPQGPNGADG 1237
Score = 30.0 bits (66), Expect = 8.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+GP G +G G G PG++G G G+KG
Sbjct: 1227 RGPQGPNGADGPQGPPGSVGSVGGVGEKG 1255
Score = 30.0 bits (66), Expect = 8.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G G GDPG PG GP+G +G G
Sbjct: 1330 GVGGDKGEDGDPGQPGPPGPSGEAGPPG 1357
>sp|O42350|CO1A2_RANCA Collagen alpha 2(I) chain precursor
Length = 1355
Score = 103 bits (257), Expect = 6e-22
Identities = 72/235 (30%), Positives = 106/235 (45%), Gaps = 11/235 (4%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSNXXXXXXXXXXXXXXXXXXXXIMAMQLRSP 329
+GP G +GP G PG PG G G SG G + + L+S
Sbjct: 1071 RGPAGFTGPAGPPGPPGPPGHAGPSGG-GYDGGDGGEYYRADQPERKPKDYEVDATLKSL 1129
Query: 330 TKGVVYGDDPAAAELLGNNAIKNPQGTKEVPARTCKQLSSENPNIPDGEYWIDPNGGRTS 509
+ + I P+G+++ PARTC+ L +P G YWIDPN G TS
Sbjct: 1130 NQQI--------------EVILTPEGSRKNPARTCRDLRLSHPEWTSGFYWIDPNQGCTS 1175
Query: 510 DAVKVFCKISEEKTCIKPLSKEISIRSW---NSPITKGHTWLKSLLN-SDEIQYSIPN-- 671
DA++VFC S +TCI EI+ ++W S K H W +LN + +Y
Sbjct: 1176 DAIRVFCDFSSGETCIHANPDEITQKNWYINTSNKDKKHLWFGEILNGGTQFEYHDEGLT 1235
Query: 672 -----GQLAFLKIYSDAATQRITFACENHPIIGNEEKVNKVMAPRLLADDDTIIK 821
QLAF+++ ++ A+Q IT+ C+N +EE N A L +D ++
Sbjct: 1236 AKDMATQLAFMRLLANQASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELR 1290
Score = 41.2 bits (95), Expect = 0.004
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
GP G +G RG+PG PG++GP G G G+N
Sbjct: 265 GPTGAAGGRGEPGPPGSLGPAGPPGNPGTN 294
Score = 36.6 bits (83), Expect = 0.091
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+GP G SGP G PG G GP GL+G KG
Sbjct: 810 RGPRGDSGPVGRPGEQGQHGPVGLAGDKG 838
Score = 36.2 bits (82), Expect = 0.12
Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 153 GPVGISGPRGD---PGIPGAIGPTGLSGKKGSN 242
GP G GP GD PG PG +G GL G GSN
Sbjct: 418 GPPGARGPNGDAGRPGEPGLLGARGLPGFSGSN 450
Score = 35.8 bits (81), Expect = 0.15
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
G GI GPRG PG PG+ G G G G N
Sbjct: 82 GQQGIMGPRGPPGPPGSPGSQGFQGLPGEN 111
Score = 35.4 bits (80), Expect = 0.20
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G++GPRG PG G GP G +G G
Sbjct: 691 GPSGVAGPRGAPGERGEAGPAGPTGFAG 718
Score = 35.0 bits (79), Expect = 0.26
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G SGPRG PG G+ GP G SG+ G
Sbjct: 889 GLAGSSGPRGPPGSVGSPGPVGHSGEAG 916
Score = 35.0 bits (79), Expect = 0.26
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+GP G G RGD G G G GL G+KG N
Sbjct: 987 RGPAGPQGVRGDKGEAGERGARGLDGRKGHN 1017
Score = 34.7 bits (78), Expect = 0.34
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
QGP GI G G+ G+PG GP G+ G G+
Sbjct: 39 QGPPGIPGRDGEDGLPGLPGPPGVPGLGGN 68
Score = 34.7 bits (78), Expect = 0.34
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+GPVG G RG PG PG G G+ G GS+
Sbjct: 147 RGPVGPQGARGFPGTPGLPGFKGIRGHTGSD 177
Score = 34.7 bits (78), Expect = 0.34
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G G GDPGI G G TG G+ GS
Sbjct: 328 GPSGARGLAGDPGIAGGKGDTGSKGEPGS 356
Score = 34.7 bits (78), Expect = 0.34
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
GP G+ G RG G+PG G GL G GSN
Sbjct: 853 GPSGVLGARGILGLPGTRGERGLPGGPGSN 882
Score = 33.9 bits (76), Expect = 0.59
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G +G G PG G GPTG GK GS
Sbjct: 781 GPAGRAGAPGPPGNVGPSGPTGHPGKDGS 809
Score = 33.1 bits (74), Expect = 1.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 171 GPRGDPGIPGAIGPTGLSGKKGSN 242
GPRGD G PG GP G+ G+ G +
Sbjct: 28 GPRGDKGPPGEQGPPGIPGRDGED 51
Score = 33.1 bits (74), Expect = 1.0
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 153 GPVGISGPRGD---PGIPGAIGPTGLSGKKGSN 242
GPVG +GP G PG+PGA G G G G+N
Sbjct: 232 GPVGPAGPIGSAGAPGLPGAPGAKGELGPAGNN 264
Score = 32.7 bits (73), Expect = 1.3
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
G G +G RG PG G IGP G +G +GS+
Sbjct: 199 GSPGQAGARGLPGERGRIGPAGSAGSRGSD 228
Score = 32.3 bits (72), Expect = 1.7
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QG +G GP G PG PG+ G GL G+ G
Sbjct: 84 QGIMGPRGPPGPPGSPGSQGFQGLPGENG 112
Score = 32.3 bits (72), Expect = 1.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP+G +G G PG PGA G G +G G
Sbjct: 238 GPIGSAGAPGLPGAPGAKGELGPAGNNG 265
Score = 32.3 bits (72), Expect = 1.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G +G +G RG G PGA GP G +G+ G
Sbjct: 406 GGIGPAGSRGSSGPPGARGPNGDAGRPG 433
Score = 32.3 bits (72), Expect = 1.7
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAI---GPTGLSGKKGSN 242
I+G G +GP G G PGAI GP G +G+ G N
Sbjct: 464 IEGRSGAAGPAGARGEPGAIGFPGPKGPNGEPGKN 498
Score = 32.3 bits (72), Expect = 1.7
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G VG SGP G PG G+ GP G SG G
Sbjct: 793 GNVGPSGPTGHPGKDGSRGPRGDSGPVG 820
Score = 32.3 bits (72), Expect = 1.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GPVG++G +G G G GP G +G G
Sbjct: 829 GPVGLAGDKGPSGEAGPAGPPGAAGPSG 856
Score = 32.0 bits (71), Expect = 2.2
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GPVG GP G PG G G G SG+ G
Sbjct: 118 GPVGSRGPSGAPGKAGEDGHPGKSGRPG 145
Score = 32.0 bits (71), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
+G G GP+G+ G PG +G G +G G N
Sbjct: 729 KGDRGAKGPKGEAGSPGPLGAHGSAGPAGPN 759
Score = 32.0 bits (71), Expect = 2.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+ G +G+ G PG GP+GL+G G
Sbjct: 928 GRDGLPGAKGERGYPGNTGPSGLAGAPG 955
Score = 31.6 bits (70), Expect = 2.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G +G RG G G +GP G G G+
Sbjct: 217 GPAGSAGSRGSDGSSGPVGPAGPIGSAGA 245
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP GI G RG G PG G G +G G
Sbjct: 628 GPAGIPGERGTAGTPGTKGEKGDAGNSG 655
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G GP G PG PG G G G G
Sbjct: 277 GPPGSLGPAGPPGNPGTNGVNGAKGTAG 304
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
I G G +G +G+PG G GP G SG++G
Sbjct: 341 IAGGKGDTGSKGEPGSVGQQGPAGPSGEEG 370
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
QG G +GP+G G GA GP G G+ G+
Sbjct: 453 QGKEGPAGPQGIEGRSGAAGPAGARGEPGA 482
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+ G +G SGP G PG G G G G+KG
Sbjct: 620 LNGGLGPSGPAGIPGERGTAGTPGTKGEKG 649
Score = 31.2 bits (69), Expect = 3.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G +G RGD G GA G G +G+ G+
Sbjct: 760 GPAGSTGARGDAGPSGATGFPGPAGRAGA 788
Score = 31.2 bits (69), Expect = 3.8
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G SG RG+ G G G TG SG +G
Sbjct: 961 GPAGKSGNRGEGGPSGPAGITGPSGPRG 988
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+GP G +G G+PG+ GA G G SG G
Sbjct: 423 RGPNGDAGRPGEPGLLGARGLPGFSGSNG 451
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G G G PG GP G GK G
Sbjct: 472 GPAGARGEPGAIGFPGPKGPNGEPGKNG 499
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GP G +G RG+ G PG G G G GS
Sbjct: 571 GPPGSAGTRGERGAPGESGGAGPHGPSGS 599
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+G G SG G+PG GA GP G +G G
Sbjct: 648 KGDAGNSGDYGNPGRDGARGPAGAAGAPG 676
Score = 30.8 bits (68), Expect = 5.0
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +GP G G GA G G G KG
Sbjct: 712 GPTGFAGPPGAAGHTGAKGDRGAKGPKG 739
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G +GP G G G GP+G +G G
Sbjct: 754 GPAGPNGPAGSTGARGDAGPSGATGFPG 781
Score = 30.8 bits (68), Expect = 5.0
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKGS 239
GPVG SG G G PG GP G G G+
Sbjct: 907 GPVGHSGEAGRDGHPGNDGPPGRDGLPGA 935
Score = 30.4 bits (67), Expect = 6.5
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +3
Query: 150 QGPVGISGPRGD---PGIPGAIGPTGLSGKKG 236
+GP G GP G+ PGIPG G GL G G
Sbjct: 27 RGPRGDKGPPGEQGPPGIPGRDGEDGLPGLPG 58
Score = 30.4 bits (67), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G G G+ G PG GP G +G +G
Sbjct: 553 GPPGEVGKPGERGAPGDFGPPGSAGTRG 580
Score = 30.4 bits (67), Expect = 6.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 9/39 (23%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAI---------GPTGLSGKKGS 239
+GP G GP G G PGA GP G+ G++G+
Sbjct: 600 RGPSGAPGPDGQKGEPGAAGLNGGLGPSGPAGIPGERGT 638
Score = 30.4 bits (67), Expect = 6.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+GP G +GP G PGA GP+G+ G +G
Sbjct: 837 KGPSGEAGPAGP---PGAAGPSGVLGARG 862
Score = 30.0 bits (66), Expect = 8.5
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
QGP G G G G GA GP GL G G
Sbjct: 504 QGPSGNRGAPGPDGNNGAQGPAGLGGATG 532
Score = 30.0 bits (66), Expect = 8.5
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G GP G PG G GP G SG G
Sbjct: 670 GAAGAPGPAGGPGDRGESGPAGPSGVAG 697
Score = 30.0 bits (66), Expect = 8.5
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 6/35 (17%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGA------IGPTGLSGKKG 236
+G +G+ G RG+ G+PG GP+GL+G G
Sbjct: 861 RGILGLPGTRGERGLPGGPGSNGEPGPSGLAGSSG 895
>sp|P20909|CA1B_RAT Collagen alpha 1(XI) chain precursor
Length = 482
Score = 102 bits (255), Expect = 1e-21
Identities = 71/225 (31%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG-SNXXXXXXXXXXXXXXXXXXXXIMAMQLR 323
I GP G GP G PG+PG GP G G G + I + +
Sbjct: 166 IPGPAGPIGPPGPPGLPGPAGPKGNKGSSGPTGQKGDSGMPGPPGPPGPPGEVIQPLPIL 225
Query: 324 SPTKGVVYGDDPAA-------------AELLGN-NAIKN-------PQGTKEVPARTCKQ 440
SP K + + A E+ G+ N++K P GT+ PARTCK
Sbjct: 226 SPKKTRRHTESIQADAGDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKD 285
Query: 441 LSSENPNIPDGEYWIDPNGGRTSDAVKVFCKISE-EKTCIKPLSKEISIRSWNSPITKGH 617
L +P+ PDGEYWIDPN G + D+ KV+C + +TCI P K +R + P K
Sbjct: 286 LQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTAGGETCIYPDKKSEGVRLSSWPKEKPG 345
Query: 618 TWLKSLLNSDEIQY------SIPNGQLAFLKIYSDAATQRITFAC 734
+W + Y SI Q+ FLK+ + +A Q T+ C
Sbjct: 346 SWYSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTSSARQNFTYNC 390
Score = 35.4 bits (80), Expect = 0.20
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
GP G SG G PG PG GP G SG +G
Sbjct: 21 GPPGPSGEAGPPGPPGKRGPPGASGSEG 48
Score = 35.4 bits (80), Expect = 0.20
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKGSN 242
QGP G GP G GIPG +G GL G G +
Sbjct: 74 QGPSGKPGPEGLRGIPGPVGEQGLPGAAGQD 104
Score = 33.9 bits (76), Expect = 0.59
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 147 IQGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
++G G G +G PG+ G IGP G G+KG
Sbjct: 118 LKGDPGSKGEKGHPGLIGLIGPPGEQGEKG 147
Score = 33.5 bits (75), Expect = 0.77
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 147 IQGPVG---ISGPRGDPGIPGAIGPTGLSGKKG 236
I GPVG + G G G PG +GP GL G KG
Sbjct: 88 IPGPVGEQGLPGAAGQDGPPGPLGPPGLPGLKG 120
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 150 QGPVGISGPRGDPGIPGAIGPTGLSGKKG 236
+G G +G G PG G +GP G SGK G
Sbjct: 53 KGAKGEAGAEGPPGKTGPVGPQGPSGKPG 81
Score = 31.6 bits (70), Expect = 2.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G GP G PG+PG G G G+KG
Sbjct: 102 GQDGPPGPLGPPGLPGLKGDPGSKGEKG 129
Score = 30.8 bits (68), Expect = 5.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G+ G +G+ G PG GP G SG+ G
Sbjct: 3 GQDGVGGDKGEDGDPGQPGPPGPSGEAG 30
Score = 30.4 bits (67), Expect = 6.5
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 153 GPVGISGPRGDP---GIPGAIGPTGLSGKKGS 239
GP G +GP G P G PGA G G G+KG+
Sbjct: 24 GPSGEAGPPGPPGKRGPPGASGSEGGQGEKGA 55
Score = 30.0 bits (66), Expect = 8.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 153 GPVGISGPRGDPGIPGAIGPTGLSGKKG 236
G G G GDPG PG GP+G +G G
Sbjct: 6 GVGGDKGEDGDPGQPGPPGPSGEAGPPG 33
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,460,215
Number of Sequences: 369166
Number of extensions: 1952417
Number of successful extensions: 20270
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17935
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)