Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_K19
(815 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O22342|ADT1_GOSHI ADP,ATP carrier protein 1, mitochondri... 322 6e-88
sp|P18239|ADT2_YEAST ADP,ATP carrier protein 2 (ADP/ATP tra... 321 1e-87
sp|P18238|ADT3_YEAST ADP,ATP carrier protein 3 (ADP/ATP tra... 320 2e-87
sp|Q41629|ADT1_WHEAT ADP,ATP carrier protein 1, mitochondri... 319 5e-87
sp|P40941|ADT2_ARATH ADP,ATP carrier protein 2, mitochondri... 319 7e-87
sp|P31691|ADT_ORYSA ADP,ATP carrier protein, mitochondrial ... 318 9e-87
sp|P27080|ADT_CHLRE ADP,ATP carrier protein (ADP/ATP transl... 318 9e-87
sp|P25083|ADT1_SOLTU ADP,ATP carrier protein, mitochondrial... 318 1e-86
sp|P49382|ADT_KLULA ADP,ATP carrier protein (ADP/ATP transl... 318 1e-86
sp|P04709|ADT1_MAIZE ADP,ATP carrier protein 1, mitochondri... 317 2e-86
>sp|O22342|ADT1_GOSHI ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP
translocase 1) (Adenine nucleotide translocator 1) (ANT
1)
Length = 386
Score = 322 bits (826), Expect = 6e-88
Identities = 165/265 (62%), Positives = 194/265 (73%), Gaps = 3/265 (1%)
Frame = +1
Query: 28 VSGCAAVISKSAAAPIERVKLMVQNQGEMIKQGALDKPYNGIWDCTTRTFRTEGILPFWR 207
+ G +A +SK+AAAPIERVKL++QNQ EMIK G L +PY GI DC RT + EG WR
Sbjct: 92 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIKDEGFGSLWR 151
Query: 208 GNLANCIRYFPTQALNFAFKDKIKATFDPKKTDEQYMV-FIKNVGSXXXXXXMSLLFVYS 384
GN AN IRYFPTQALNFAFKD K F+ KK + Y F N+ S SLLFVYS
Sbjct: 152 GNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYS 211
Query: 385 LDYCRTRLANDVKSSKKGSERQFNGMIDVYKKTYKSDGLPGLYRGFVISCVGIIVYRGCY 564
LDY RTRLAND K++KKG ERQFNG++DVY+KT KSDG+ GLYRGF ISCVGIIVYRG Y
Sbjct: 212 LDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 271
Query: 565 FGFYDTLKPLLL--GKDAGVFACFILGYAVTVTSGLISYPIDTIRRRMMMTSGQAVKYKG 738
FG YD+LKP+LL FA F+LG+ +T + L SYPIDT+RRRMMMTSG+AVKYK
Sbjct: 272 FGMYDSLKPVLLTGSMQDSFFASFVLGWLITNGAALASYPIDTVRRRMMMTSGKAVKYKS 331
Query: 739 SIDCMIHILKHEGFMAYMKGAGANI 813
S+D ILK+EG + KGAG+NI
Sbjct: 332 SLDAFSQILKNEGGKSLFKGAGSNI 356
>sp|P18239|ADT2_YEAST ADP,ATP carrier protein 2 (ADP/ATP translocase 2) (Adenine
nucleotide translocator 2) (ANT 2)
Length = 318
Score = 321 bits (823), Expect = 1e-87
Identities = 166/264 (62%), Positives = 195/264 (73%), Gaps = 2/264 (0%)
Frame = +1
Query: 28 VSGCAAVISKSAAAPIERVKLMVQNQGEMIKQGALDKPYNGIWDCTTRTFRTEGILPFWR 207
+ G +A ++K+AA+PIERVKL++QNQ EM+KQG LD+ Y GI DC RT EG++ FWR
Sbjct: 29 MGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWR 88
Query: 208 GNLANCIRYFPTQALNFAFKDKIKATFDPKKTDEQYMVFIKNVGSXXXXXXMSLLFVYSL 387
GN AN IRYFPTQALNFAFKDKIKA F KK + F N+ S +SLLFVYSL
Sbjct: 89 GNTANVIRYFPTQALNFAFKDKIKAMFGFKKEEGYAKWFAGNLASGGAAGALSLLFVYSL 148
Query: 388 DYCRTRLANDVKSSKKGSERQFNGMIDVYKKTYKSDGLPGLYRGFVISCVGIIVYRGCYF 567
DY RTRLA D KSSKKG RQFNG+IDVYKKT KSDG+ GLYRGF+ S VGI+VYRG YF
Sbjct: 149 DYARTRLAADSKSSKKGGARQFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYF 208
Query: 568 GFYDTLKPLLL-GKDAGVF-ACFILGYAVTVTSGLISYPIDTIRRRMMMTSGQAVKYKGS 741
G YD+LKPLLL G G F A F+LG+ VT + SYP+DT+RRRMMMTSGQAVKY G+
Sbjct: 209 GMYDSLKPLLLTGSLEGSFLASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQAVKYDGA 268
Query: 742 IDCMIHILKHEGFMAYMKGAGANI 813
DC+ I+ EG + KG GANI
Sbjct: 269 FDCLRKIVAAEGVGSLFKGCGANI 292
>sp|P18238|ADT3_YEAST ADP,ATP carrier protein 3 (ADP/ATP translocase 3) (Adenine
nucleotide translocator 3) (ANT 3)
Length = 307
Score = 320 bits (821), Expect = 2e-87
Identities = 162/264 (61%), Positives = 194/264 (73%), Gaps = 2/264 (0%)
Frame = +1
Query: 28 VSGCAAVISKSAAAPIERVKLMVQNQGEMIKQGALDKPYNGIWDCTTRTFRTEGILPFWR 207
+ G +A I+K+AA+PIERVK+++QNQ EMIKQG LDK Y+GI DC RT + EG++ FWR
Sbjct: 18 MGGVSAAIAKTAASPIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWR 77
Query: 208 GNLANCIRYFPTQALNFAFKDKIKATFDPKKTDEQYMVFIKNVGSXXXXXXMSLLFVYSL 387
GN AN IRYFPTQALNFAFKDKIK F KK + F N+ S +SLLFVYSL
Sbjct: 78 GNTANVIRYFPTQALNFAFKDKIKLMFGFKKEEGYGKWFAGNLASGGAAGALSLLFVYSL 137
Query: 388 DYCRTRLANDVKSSKKGSERQFNGMIDVYKKTYKSDGLPGLYRGFVISCVGIIVYRGCYF 567
D+ RTRLA D KSSKKG RQFNG+ DVYKKT KSDG+ GLYRGF+ S VGI+VYRG YF
Sbjct: 138 DFARTRLAADAKSSKKGGARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYF 197
Query: 568 GFYDTLKPLLL--GKDAGVFACFILGYAVTVTSGLISYPIDTIRRRMMMTSGQAVKYKGS 741
G +D+LKPL+L D A F+LG+ VT + SYP+DT+RRRMMMTSGQAVKY G+
Sbjct: 198 GMFDSLKPLVLTGSLDGSFLASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQAVKYNGA 257
Query: 742 IDCMIHILKHEGFMAYMKGAGANI 813
IDC+ I+ EG + KG GANI
Sbjct: 258 IDCLKKIVASEGVGSLFKGCGANI 281
>sp|Q41629|ADT1_WHEAT ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP
translocase 1) (Adenine nucleotide translocator 1) (ANT
1)
Length = 331
Score = 319 bits (818), Expect = 5e-87
Identities = 167/265 (63%), Positives = 192/265 (72%), Gaps = 3/265 (1%)
Frame = +1
Query: 28 VSGCAAVISKSAAAPIERVKLMVQNQGEMIKQGALDKPYNGIWDCTTRTFRTEGILPFWR 207
+ G +A +SK+AAAPIERVKL++QNQ EMIK G L +PY GI DC RT + EG WR
Sbjct: 37 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSLWR 96
Query: 208 GNLANCIRYFPTQALNFAFKDKIKATFDPKKTDEQYMV-FIKNVGSXXXXXXMSLLFVYS 384
GN AN IRYFPTQALNFAFKD K F+ KK + Y F N+ S SL FVYS
Sbjct: 97 GNTANVIRYFPTQALNFAFKDYFKRMFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYS 156
Query: 385 LDYCRTRLANDVKSSKKGSERQFNGMIDVYKKTYKSDGLPGLYRGFVISCVGIIVYRGCY 564
LDY RTRLAND K+SK G ERQFNG++DVY+KT KSDG+ GLYRGF ISCVGIIVYRG Y
Sbjct: 157 LDYARTRLANDAKASKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 216
Query: 565 FGFYDTLKPLLLGKDAGV--FACFILGYAVTVTSGLISYPIDTIRRRMMMTSGQAVKYKG 738
FG YD+LKP+LL V FA F LG+ +T +GL SYPIDT+RRRMMMTSG+AVKYK
Sbjct: 217 FGLYDSLKPVLLTGTLQVCFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKS 276
Query: 739 SIDCMIHILKHEGFMAYMKGAGANI 813
S+D ILK EG + KGAGANI
Sbjct: 277 SLDAFQQILKKEGAKSLFKGAGANI 301
>sp|P40941|ADT2_ARATH ADP,ATP carrier protein 2, mitochondrial precursor (ADP/ATP
translocase 2) (Adenine nucleotide translocator 2) (ANT
2)
Length = 385
Score = 319 bits (817), Expect = 7e-87
Identities = 168/266 (63%), Positives = 193/266 (72%), Gaps = 4/266 (1%)
Frame = +1
Query: 28 VSGCAAVISKSAAAPIERVKLMVQNQGEMIKQGALDKPYNGIWDCTTRTFRTEGILPFWR 207
+ G +A +SK+AAAPIERVKL++QNQ EM+K G L +PY GI DC RT R EGI WR
Sbjct: 90 MGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLTEPYKGIRDCFGRTIRDEGIGSLWR 149
Query: 208 GNLANCIRYFPTQALNFAFKDKIKATFDPKKTDEQYMV-FIKNVGSXXXXXXMSLLFVYS 384
GN AN IRYFPTQALNFAFKD K F+ KK + Y F N+ S SLLFVYS
Sbjct: 150 GNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYS 209
Query: 385 LDYCRTRLANDVKSSKK-GSERQFNGMIDVYKKTYKSDGLPGLYRGFVISCVGIIVYRGC 561
LDY RTRLAND KS+KK G ERQFNG++DVYKKT KSDG+ GLYRGF ISC GIIVYRG
Sbjct: 210 LDYARTRLANDSKSAKKGGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCAGIIVYRGL 269
Query: 562 YFGFYDTLKPLLLGKDA--GVFACFILGYAVTVTSGLISYPIDTIRRRMMMTSGQAVKYK 735
YFG YD++KP+LL D FA F LG+ +T +GL SYPIDT+RRRMMMTSG+AVKYK
Sbjct: 270 YFGLYDSVKPVLLTGDLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYK 329
Query: 736 GSIDCMIHILKHEGFMAYMKGAGANI 813
S D I+K EG + KGAGANI
Sbjct: 330 SSFDAFSQIVKKEGAKSLFKGAGANI 355
>sp|P31691|ADT_ORYSA ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP
translocase) (Adenine nucleotide translocator) (ANT)
Length = 382
Score = 318 bits (816), Expect = 9e-87
Identities = 164/265 (61%), Positives = 192/265 (72%), Gaps = 3/265 (1%)
Frame = +1
Query: 28 VSGCAAVISKSAAAPIERVKLMVQNQGEMIKQGALDKPYNGIWDCTTRTFRTEGILPFWR 207
+ G +A +SK+AAAPIERVKL++QNQ EMIK G L +PY GI DC RT + EG WR
Sbjct: 88 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASLWR 147
Query: 208 GNLANCIRYFPTQALNFAFKDKIKATFDPKKTDEQYMV-FIKNVGSXXXXXXMSLLFVYS 384
GN AN IRYFPTQALNFAFKD K F+ KK + Y F N+ S SL FVYS
Sbjct: 148 GNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFGGNLASGGAAGASSLFFVYS 207
Query: 385 LDYCRTRLANDVKSSKKGSERQFNGMIDVYKKTYKSDGLPGLYRGFVISCVGIIVYRGCY 564
LDY RTRLAND K++K G ERQFNG++DVY+KT KSDG+ GLYRGF ISCVGIIVYRG Y
Sbjct: 208 LDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 267
Query: 565 FGFYDTLKPLLL--GKDAGVFACFILGYAVTVTSGLISYPIDTIRRRMMMTSGQAVKYKG 738
FG YD+LKP++L FA F LG+ +T +GL SYPIDT+RRRMMMTSG+AVKYK
Sbjct: 268 FGMYDSLKPVVLTGSLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKS 327
Query: 739 SIDCMIHILKHEGFMAYMKGAGANI 813
S+D ILK+EG + KGAGANI
Sbjct: 328 SMDAFSQILKNEGAKSLFKGAGANI 352
>sp|P27080|ADT_CHLRE ADP,ATP carrier protein (ADP/ATP translocase) (Adenine nucleotide
translocator) (ANT)
Length = 308
Score = 318 bits (816), Expect = 9e-87
Identities = 165/263 (62%), Positives = 192/263 (73%), Gaps = 3/263 (1%)
Frame = +1
Query: 34 GCAAVISKSAAAPIERVKLMVQNQGEMIKQGALDKPYNGIWDCTTRTFRTEGILPFWRGN 213
G +A +SK+AAAPIERVKL++QNQ EMIKQG L PY GI +C RT R EG WRGN
Sbjct: 16 GLSAAVSKTAAAPIERVKLLIQNQDEMIKQGRLASPYKGIGECFVRTVREEGFGSLWRGN 75
Query: 214 LANCIRYFPTQALNFAFKDKIKATFDPKKTDEQYMVFIKNVGSXXXXXXMSLLFVYSLDY 393
AN IRYFPTQALNFAFKDK K F K E + F N+ S +SL FVYSLDY
Sbjct: 76 TANVIRYFPTQALNFAFKDKFKRMFGFNKDKEYWKWFAGNMASGGAAGAVSLSFVYSLDY 135
Query: 394 CRTRLANDVKSSKK-GSERQFNGMIDVYKKTYKSDGLPGLYRGFVISCVGIIVYRGCYFG 570
RTRLAND KS+KK G +RQFNG++DVY+KT SDG+ GLYRGF ISCVGI+VYRG YFG
Sbjct: 136 ARTRLANDAKSAKKGGGDRQFNGLVDVYRKTIASDGIAGLYRGFNISCVGIVVYRGLYFG 195
Query: 571 FYDTLKP-LLLGKDAGVF-ACFILGYAVTVTSGLISYPIDTIRRRMMMTSGQAVKYKGSI 744
YD+LKP +L+G A F A F+LG+ +T+ +GL SYPIDTIRRRMMMTSG AVKY S
Sbjct: 196 MYDSLKPVVLVGPLANNFLAAFLLGWGITIGAGLASYPIDTIRRRMMMTSGSAVKYNSSF 255
Query: 745 DCMIHILKHEGFMAYMKGAGANI 813
C I+K+EG + KGAGANI
Sbjct: 256 HCFQEIVKNEGMKSLFKGAGANI 278
>sp|P25083|ADT1_SOLTU ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP
translocase) (Adenine nucleotide translocator) (ANT)
Length = 386
Score = 318 bits (815), Expect = 1e-86
Identities = 165/265 (62%), Positives = 193/265 (72%), Gaps = 3/265 (1%)
Frame = +1
Query: 28 VSGCAAVISKSAAAPIERVKLMVQNQGEMIKQGALDKPYNGIWDCTTRTFRTEGILPFWR 207
+ G +A +SK+AAAPIERVKL++QNQ EM+K G L +PY GI +C RT + EG WR
Sbjct: 92 MGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLSEPYKGIGECFGRTIKEEGFGSLWR 151
Query: 208 GNLANCIRYFPTQALNFAFKDKIKATFDPKKTDEQYMV-FIKNVGSXXXXXXMSLLFVYS 384
GN AN IRYFPTQALNFAFKD K F+ KK + Y F N+ S SL FVYS
Sbjct: 152 GNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYS 211
Query: 385 LDYCRTRLANDVKSSKKGSERQFNGMIDVYKKTYKSDGLPGLYRGFVISCVGIIVYRGCY 564
LDY RTRLAND K+SKKG ERQFNG++DVYKKT KSDG+ GLYRGF ISCVGIIVYRG Y
Sbjct: 212 LDYARTRLANDRKASKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLY 271
Query: 565 FGFYDTLKPLLL--GKDAGVFACFILGYAVTVTSGLISYPIDTIRRRMMMTSGQAVKYKG 738
FG YD+LKP+LL FA F LG+ +T +GL SYPIDT+RRRMMMTSG+AVKYK
Sbjct: 272 FGMYDSLKPVLLTGNLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKS 331
Query: 739 SIDCMIHILKHEGFMAYMKGAGANI 813
S+D I+K+EG + KGAGANI
Sbjct: 332 SLDAFSQIVKNEGPKSLFKGAGANI 356
>sp|P49382|ADT_KLULA ADP,ATP carrier protein (ADP/ATP translocase) (Adenine nucleotide
translocator) (ANT)
Length = 305
Score = 318 bits (814), Expect = 1e-86
Identities = 163/264 (61%), Positives = 192/264 (72%), Gaps = 2/264 (0%)
Frame = +1
Query: 28 VSGCAAVISKSAAAPIERVKLMVQNQGEMIKQGALDKPYNGIWDCTTRTFRTEGILPFWR 207
+ G +A +SK+AAAPIERVKL++QNQ EMIKQG+LD+ Y GI +C RT EG+ FWR
Sbjct: 16 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKQGSLDRRYTGIVECFKRTAADEGVASFWR 75
Query: 208 GNLANCIRYFPTQALNFAFKDKIKATFDPKKTDEQYMVFIKNVGSXXXXXXMSLLFVYSL 387
GN AN IRYFPTQALNFAFKDKIKA F KK + F N+ S +SLLFVYSL
Sbjct: 76 GNTANVIRYFPTQALNFAFKDKIKAMFGFKKEEGYAKWFAGNLASGGLAGGLSLLFVYSL 135
Query: 388 DYCRTRLANDVKSSKKGSERQFNGMIDVYKKTYKSDGLPGLYRGFVISCVGIIVYRGCYF 567
DY RTRLA D KS+KKG ERQFNG++DVYKKT SDG+ GLYRGF+ S VGI+VYRG YF
Sbjct: 136 DYARTRLAADSKSAKKGGERQFNGLVDVYKKTLASDGVAGLYRGFLPSVVGIVVYRGLYF 195
Query: 568 GFYDTLKPLLL--GKDAGVFACFILGYAVTVTSGLISYPIDTIRRRMMMTSGQAVKYKGS 741
G YD+LKPLLL + A F+LG+AVT + SYP+DT+RRRMMMTSGQAVKY G+
Sbjct: 196 GLYDSLKPLLLTGSLENSFLASFLLGWAVTTGASTASYPLDTVRRRMMMTSGQAVKYDGA 255
Query: 742 IDCMIHILKHEGFMAYMKGAGANI 813
D I+ EG + KG GANI
Sbjct: 256 FDAFRKIVAAEGIKSLFKGCGANI 279
>sp|P04709|ADT1_MAIZE ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP
translocase 1) (Adenine nucleotide translocator 1) (ANT
1)
Length = 387
Score = 317 bits (812), Expect = 2e-86
Identities = 163/265 (61%), Positives = 191/265 (72%), Gaps = 3/265 (1%)
Frame = +1
Query: 28 VSGCAAVISKSAAAPIERVKLMVQNQGEMIKQGALDKPYNGIWDCTTRTFRTEGILPFWR 207
+ G +A +SK+AAAPIERVKL++QNQ EMIK G L +PY GI DC RT + EG WR
Sbjct: 93 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIVDCFKRTIKDEGFSSLWR 152
Query: 208 GNLANCIRYFPTQALNFAFKDKIKATFDPKKTDEQYMV-FIKNVGSXXXXXXMSLLFVYS 384
GN AN IRYFPTQALNFAFKD K F+ KK + Y F N+ S SL FVYS
Sbjct: 153 GNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYS 212
Query: 385 LDYCRTRLANDVKSSKKGSERQFNGMIDVYKKTYKSDGLPGLYRGFVISCVGIIVYRGCY 564
LDY RTRLAND K++K G ERQFNG++DVY+KT KSDG+ GLYRGF ISCVGIIVYRG Y
Sbjct: 213 LDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 272
Query: 565 FGFYDTLKPLLL--GKDAGVFACFILGYAVTVTSGLISYPIDTIRRRMMMTSGQAVKYKG 738
FG YD++KP++L FA F LG+ +T +GL SYPIDT+RRRMMMTSG+AVKYK
Sbjct: 273 FGLYDSIKPVVLTGNLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKS 332
Query: 739 SIDCMIHILKHEGFMAYMKGAGANI 813
S+D ILK EG + KGAGANI
Sbjct: 333 SLDAFQQILKKEGPKSLFKGAGANI 357
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,483,581
Number of Sequences: 369166
Number of extensions: 1816714
Number of successful extensions: 4946
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4501
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7811456130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)