Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_I11-2
(135 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P47856|GFPT1_MOUSE Glucosamine--fructose-6-phosphate ami... 86 3e-17
sp|Q9Z2Z9|GFPT2_MOUSE Glucosamine--fructose-6-phosphate ami... 85 4e-17
sp|O94808|GFPT2_HUMAN Glucosamine--fructose-6-phosphate ami... 85 4e-17
sp|Q06210|GFPT1_HUMAN Glucosamine--fructose-6-phosphate ami... 85 6e-17
sp|P14742|GFA1_YEAST Glucosamine--fructose-6-phosphate amin... 78 7e-15
sp|P53704|GFA1_CANAL Glucosamine--fructose-6-phosphate amin... 76 3e-14
sp|Q09740|GFA1_SCHPO Putative glucosamine--fructose-6-phosp... 62 3e-10
sp|Q98LX5|GLMS_RHILO Glucosamine--fructose-6-phosphate amin... 52 4e-07
sp|Q8CY30|GLMS_BRUSU Glucosamine--fructose-6-phosphate amin... 48 6e-06
sp|Q577Y1|GLMS_BRUAB Glucosamine--fructose-6-phosphate amin... 48 6e-06
>sp|P47856|GFPT1_MOUSE Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1
(Hexosephosphate aminotransferase 1)
(D-fructose-6-phosphate amidotransferase 1) (GFAT 1)
(GFAT1)
Length = 697
Score = 85.5 bits (210), Expect = 3e-17
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +1
Query: 1 VELASDLIDRNTPVFRDDVCFFISQSGETADTLMALRYCLKRGAL 135
VELASD +DRNTPVFRDDVCFFISQSGETADTLM LRYC +RGAL
Sbjct: 414 VELASDFLDRNTPVFRDDVCFFISQSGETADTLMGLRYCKERGAL 458
>sp|Q9Z2Z9|GFPT2_MOUSE Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 2
(Hexosephosphate aminotransferase 2)
(D-fructose-6-phosphate amidotransferase 2) (GFAT 2)
(GFAT2)
Length = 682
Score = 85.1 bits (209), Expect = 4e-17
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +1
Query: 1 VELASDLIDRNTPVFRDDVCFFISQSGETADTLMALRYCLKRGAL 135
VELASD +DRNTPVFRDDVCFFISQSGETADTL+ALRYC RGAL
Sbjct: 399 VELASDFLDRNTPVFRDDVCFFISQSGETADTLLALRYCKDRGAL 443
>sp|O94808|GFPT2_HUMAN Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 2
(Hexosephosphate aminotransferase 2)
(D-fructose-6-phosphate amidotransferase 2) (GFAT 2)
(GFAT2)
Length = 682
Score = 85.1 bits (209), Expect = 4e-17
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = +1
Query: 1 VELASDLIDRNTPVFRDDVCFFISQSGETADTLMALRYCLKRGAL 135
VELASD +DRNTPVFRDDVCFFISQSGETADTL+ALRYC RGAL
Sbjct: 399 VELASDFLDRNTPVFRDDVCFFISQSGETADTLLALRYCKDRGAL 443
>sp|Q06210|GFPT1_HUMAN Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1
(Hexosephosphate aminotransferase 1)
(D-fructose-6-phosphate amidotransferase 1) (GFAT 1)
(GFAT1)
Length = 699
Score = 84.7 bits (208), Expect = 6e-17
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +1
Query: 1 VELASDLIDRNTPVFRDDVCFFISQSGETADTLMALRYCLKRGAL 135
VELASD +DRNTPVFRDDVCFF+SQSGETADTLM LRYC +RGAL
Sbjct: 416 VELASDFLDRNTPVFRDDVCFFLSQSGETADTLMGLRYCKERGAL 460
>sp|P14742|GFA1_YEAST Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
(Hexosephosphate aminotransferase)
(D-fructose-6-phosphate amidotransferase) (GFAT)
Length = 717
Score = 77.8 bits (190), Expect = 7e-15
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +1
Query: 1 VELASDLIDRNTPVFRDDVCFFISQSGETADTLMALRYCLKRGAL 135
VELASD +DR PVFRDDVC F+SQSGETADT++AL YCL+RGAL
Sbjct: 429 VELASDFLDRKCPVFRDDVCVFVSQSGETADTMLALNYCLERGAL 473
>sp|P53704|GFA1_CANAL Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
(Hexosephosphate aminotransferase)
(D-fructose-6-phosphate amidotransferase) (GFAT)
Length = 713
Score = 75.9 bits (185), Expect = 3e-14
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +1
Query: 1 VELASDLIDRNTPVFRDDVCFFISQSGETADTLMALRYCLKRGAL 135
VELASD +DR +PVFRDD C F+SQSGETAD+++AL+YCL+RGAL
Sbjct: 428 VELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQYCLERGAL 472
>sp|Q09740|GFA1_SCHPO Putative glucosamine--fructose-6-phosphate aminotransferase
[isomerizing] (Hexosephosphate aminotransferase)
(D-fructose-6-phosphate amidotransferase) (GFAT)
Length = 696
Score = 62.4 bits (150), Expect = 3e-10
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1
Query: 1 VELASDLIDRNTPVFRDDVCFFISQSGETADTLMALRYCLKRGAL 135
VELASD +DR VFRDD F+SQSGETAD+L+AL+Y L+ GAL
Sbjct: 414 VELASDFVDRCPSVFRDDTFIFVSQSGETADSLLALQYTLENGAL 458
>sp|Q98LX5|GLMS_RHILO Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
(Hexosephosphate aminotransferase)
(D-fructose-6-phosphate amidotransferase) (GFAT)
(L-glutamine-D-fructose-6-phosphate amidotransferase)
(Glucosamine-6-phosphate synthase)
Length = 607
Score = 52.0 bits (123), Expect = 4e-07
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = +1
Query: 1 VELASDLIDRNTPVFRDDVCFFISQSGETADTLMALRYCLKRG 129
+++AS+ R P+ +D FFISQSGETADTL +LRYC K G
Sbjct: 322 IDVASEFRYREMPLSANDAAFFISQSGETADTLASLRYCRKAG 364
>sp|Q8CY30|GLMS_BRUSU Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
(Hexosephosphate aminotransferase)
(D-fructose-6-phosphate amidotransferase) (GFAT)
(L-glutamine-D-fructose-6-phosphate amidotransferase)
(Glucosamine-6-phosphate synthase)
Length = 607
Score = 48.1 bits (113), Expect = 6e-06
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +1
Query: 4 ELASDLIDRNTPVFRDDVCFFISQSGETADTLMALRYCLKRG 129
++AS+ R P+ +D + F+SQSGETADTL +LRYC +G
Sbjct: 323 DIASEFRYREMPLSKDSLAMFVSQSGETADTLASLRYCKAQG 364
>sp|Q577Y1|GLMS_BRUAB Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
(Hexosephosphate aminotransferase)
(D-fructose-6-phosphate amidotransferase) (GFAT)
(L-glutamine-D-fructose-6-phosphate amidotransferase)
(Glucosamine-6-phosphate synthase)
Length = 607
Score = 48.1 bits (113), Expect = 6e-06
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +1
Query: 4 ELASDLIDRNTPVFRDDVCFFISQSGETADTLMALRYCLKRG 129
++AS+ R P+ +D + F+SQSGETADTL +LRYC +G
Sbjct: 323 DIASEFRYREMPLSKDSLAMFVSQSGETADTLASLRYCKAQG 364
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,603,358
Number of Sequences: 369166
Number of extensions: 131785
Number of successful extensions: 520
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 68,354,980
effective HSP length: 18
effective length of database: 65,029,750
effective search space used: 1690773500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)