Planarian EST Database


Dr_sW_014_F24

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_014_F24
         (884 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P79287|MMP20_PIG  Matrix metalloproteinase-20 precursor (...   118   2e-26
sp|O18767|MMP20_BOVIN  Matrix metalloproteinase-20 precursor...   118   2e-26
sp|O60882|MMP20_HUMAN  Matrix metalloproteinase-20 precursor...   117   3e-26
sp|Q9JHI0|MMP19_MOUSE  Matrix metalloproteinase-19 precursor...   114   3e-25
sp|P57748|MMP20_MOUSE  Matrix metalloproteinase-20 precursor...   112   1e-24
sp|O77656|MMP13_BOVIN  Collagenase 3 precursor (Matrix metal...   111   3e-24
sp|O62806|MMP13_RABIT  Collagenase 3 precursor (Matrix metal...   110   5e-24
sp|P33435|MMP13_MOUSE  Collagenase 3 precursor (Matrix metal...   110   7e-24
sp|O18927|MMP13_HORSE  Collagenase 3 precursor (Matrix metal...   109   9e-24
sp|P45452|MMP13_HUMAN  Collagenase 3 precursor (Matrix metal...   107   4e-23
>sp|P79287|MMP20_PIG Matrix metalloproteinase-20 precursor (MMP-20) (Enamel
           metalloproteinase) (Enamelysin)
          Length = 483

 Score =  118 bits (296), Expect = 2e-26
 Identities = 93/285 (32%), Positives = 133/285 (46%), Gaps = 7/285 (2%)
 Frame = +3

Query: 6   KWDKGT-TYRFYIHDERHPTTMTLGEIQRALMIGLSYWSTAGDIYFAKVSNKQGSMFSLS 182
           KW K T TYR      ++  +MT  E+ +A+ + L  WS+A  + F +V+  +  +  +S
Sbjct: 116 KWKKNTLTYRI----SKYTPSMTPAEVDKAMEMALQAWSSAVPLSFVRVNAGEADIM-IS 170

Query: 183 FADAEHVQYDVHNNFVESRDPYPLDNVPGGVLAHAFFPRNG---NLHFDSAEEWTEGKED 353
           F   +H             D YP D  P G LAHAF P  G   + HFD+AE+WT G  +
Sbjct: 171 FETGDH------------GDSYPFDG-PRGTLAHAFAPGEGLGGDTHFDNAEKWTMGM-N 216

Query: 354 GINLRLVAAHEMGHAIGLFHSNDPNALMAPWYGGYISENDFKLPDDDSQGAAFIYG---T 524
           G NL  VAAHE GHA+GL HS DP+ALM P Y  Y +   F LP DD +G   +YG   T
Sbjct: 217 GFNLFTVAAHEFGHALGLAHSTDPSALMYPTY-KYQNPYGFHLPKDDVKGIQALYGPRKT 275

Query: 525 KNGKVFVRSNKKREQSANEKELCNITNINSAFQYSDDNIYVVTDKNKVFRIIHSNNSFRV 704
             GK  V        S    ++C+ ++   A       +    D+    R +H  +  R 
Sbjct: 276 FTGKPTVPHGPPHNPSL--PDICDSSSSFDAVTMLGKELLFFRDRIFWRRQVHLMSGIR- 332

Query: 705 DASFKTLQLPNQLFDSDALFYDYSGRRFVFFKGNRVFSANGVKLE 839
             S  T   P  + + DA +         FFKG   +   G +++
Sbjct: 333 -PSTITSSFPQLMSNVDAAYEVADRGMAYFFKGPHYWITRGFQMQ 376
>sp|O18767|MMP20_BOVIN Matrix metalloproteinase-20 precursor (MMP-20) (Enamel
           metalloproteinase) (Enamelysin)
          Length = 481

 Score =  118 bits (295), Expect = 2e-26
 Identities = 92/285 (32%), Positives = 133/285 (46%), Gaps = 7/285 (2%)
 Frame = +3

Query: 6   KWDKGT-TYRFYIHDERHPTTMTLGEIQRALMIGLSYWSTAGDIYFAKVSNKQGSMFSLS 182
           KW K T TYR      ++  +MT  E+ RA+ + L  WS+A  + F +++  +  +  +S
Sbjct: 114 KWKKNTLTYRI----SKYTPSMTPAEVDRAMEMALRAWSSAVPLNFVRINAGEADIM-IS 168

Query: 183 FADAEHVQYDVHNNFVESRDPYPLDNVPGGVLAHAFFPRNG---NLHFDSAEEWTEGKED 353
           F   +H             D YP D  P G LAHAF P  G   + HFD+AE+WT G  +
Sbjct: 169 FETGDH------------GDSYPFDG-PRGTLAHAFAPGEGLGGDTHFDNAEKWTMGT-N 214

Query: 354 GINLRLVAAHEMGHAIGLFHSNDPNALMAPWYGGYISENDFKLPDDDSQGAAFIYGTK-- 527
           G NL  VAAHE GHA+GL HS DP+ALM P Y  Y +   F+LP DD +G   +YG +  
Sbjct: 215 GFNLFTVAAHEFGHALGLAHSTDPSALMFPTY-KYQNPYGFRLPKDDVKGIQALYGPRRA 273

Query: 528 -NGKVFVRSNKKREQSANEKELCNITNINSAFQYSDDNIYVVTDKNKVFRIIHSNNSFRV 704
            +GK           S    +LC+      A       + +  D+    R +H  +  R 
Sbjct: 274 FSGKPTAPHGPPHNPSI--PDLCDSNLSFDAVTMLGKELLLFRDRIFWRRQVHLMSGIR- 330

Query: 705 DASFKTLQLPNQLFDSDALFYDYSGRRFVFFKGNRVFSANGVKLE 839
             S  T   P  + + DA +         FFKG   +   G +++
Sbjct: 331 -PSTITSSFPQLMSNVDAAYEVAERGTAYFFKGPHYWITRGFQMQ 374
>sp|O60882|MMP20_HUMAN Matrix metalloproteinase-20 precursor (MMP-20) (Enamel
           metalloproteinase) (Enamelysin)
          Length = 483

 Score =  117 bits (294), Expect = 3e-26
 Identities = 90/285 (31%), Positives = 136/285 (47%), Gaps = 7/285 (2%)
 Frame = +3

Query: 6   KWDKGT-TYRFYIHDERHPTTMTLGEIQRALMIGLSYWSTAGDIYFAKVSNKQGSMFSLS 182
           KW K T TYR      ++  +M+  E+ +A+ + L  WS+A  + F ++++ +  +  +S
Sbjct: 116 KWKKNTLTYRI----SKYTPSMSSVEVDKAVEMALQAWSSAVPLSFVRINSGEADIM-IS 170

Query: 183 FADAEHVQYDVHNNFVESRDPYPLDNVPGGVLAHAFFPRNG---NLHFDSAEEWTEGKED 353
           F + +H             D YP D  P G LAHAF P  G   + HFD+AE+WT G  +
Sbjct: 171 FENGDH------------GDSYPFDG-PRGTLAHAFAPGEGLGGDTHFDNAEKWTMGT-N 216

Query: 354 GINLRLVAAHEMGHAIGLFHSNDPNALMAPWYGGYISENDFKLPDDDSQGAAFIYGTKNG 533
           G NL  VAAHE GHA+GL HS DP+ALM P Y  Y +   F LP DD +G   +YG +  
Sbjct: 217 GFNLFTVAAHEFGHALGLAHSTDPSALMYPTY-KYKNPYGFHLPKDDVKGIQALYGPR-- 273

Query: 534 KVFVRS---NKKREQSANEKELCNITNINSAFQYSDDNIYVVTDKNKVFRIIHSNNSFRV 704
           KVF+             +  +LC+ ++   A       + +  D+    R +H     R 
Sbjct: 274 KVFLGKPTLPHAPHHKPSIPDLCDSSSSFDAVTMLGKELLLFKDRIFWRRQVHLRTGIR- 332

Query: 705 DASFKTLQLPNQLFDSDALFYDYSGRRFVFFKGNRVFSANGVKLE 839
             S  T   P  + + DA +         FFKG   +   G +++
Sbjct: 333 -PSTITSSFPQLMSNVDAAYEVAERGTAYFFKGPHYWITRGFQMQ 376
>sp|Q9JHI0|MMP19_MOUSE Matrix metalloproteinase-19 precursor (MMP-19) (Matrix
           metalloproteinase RASI)
          Length = 527

 Score =  114 bits (286), Expect = 3e-25
 Identities = 88/282 (31%), Positives = 127/282 (45%), Gaps = 15/282 (5%)
 Frame = +3

Query: 15  KGTTYRFYIHDERHPTTMTLGEIQRALMIGLSYWSTAGDIYFAKVSNKQGSMFSLSFADA 194
           K  T+R +      P+T++L  ++ AL     YWS+   + F +V      +  LSF   
Sbjct: 108 KNLTFRIF----NVPSTLSLPRVRAALHQAFKYWSSVAPLTFREVKAGWADI-RLSFHGR 162

Query: 195 EHVQYDVHNNFVESRDPYPLDNVPGGVLAHAFFPRNGNLHFDSAEEWTEGKEDGINLRLV 374
           + +     N F          + PG VLAHA  P  G++HFD  E WTEG   G+NLR++
Sbjct: 163 QSLYCS--NTF----------DGPGKVLAHADIPELGSIHFDKDELWTEGTYQGVNLRII 210

Query: 375 AAHEMGHAIGLFHSNDPNALMAPWYGGYISENDFKLPDDDSQGAAFIYGTKN-------- 530
           AAHE+GHA+GL HS    ALMAP Y GY  +  FKL  DD  G   +YG ++        
Sbjct: 211 AAHEVGHALGLGHSRYTQALMAPVYAGY--QPFFKLHPDDVAGIQALYGKRSPETRDEEE 268

Query: 531 -------GKVFVRSNKKREQSANEKELCNITNINSAFQYSDDNIYVVTDKNKVFRIIHSN 689
                    V  +        + E +   +      + +  D ++ VTD           
Sbjct: 269 ETEMLTVSPVTAKPGPMPNPCSGEVDAMVLGPRGKTYAFKGDYVWTVTDSG-------PG 321

Query: 690 NSFRVDASFKTLQLPNQLFDSDALFYDYSGRRFVFFKGNRVF 815
             F++ A ++   LP  L   DA  Y    RR  FFKGN+V+
Sbjct: 322 PLFQISALWE--GLPGNL---DAAVYSPRTRRTHFFKGNKVW 358
>sp|P57748|MMP20_MOUSE Matrix metalloproteinase-20 precursor (MMP-20) (Enamel
           metalloproteinase) (Enamelysin)
          Length = 482

 Score =  112 bits (280), Expect = 1e-24
 Identities = 90/285 (31%), Positives = 132/285 (46%), Gaps = 7/285 (2%)
 Frame = +3

Query: 6   KWDKGT-TYRFYIHDERHPTTMTLGEIQRALMIGLSYWSTAGDIYFAKVSNKQGSMFSLS 182
           KW K   TYR      ++  +M+  E+ +A+ + L  WSTA  + F ++++ +  +  +S
Sbjct: 115 KWKKNILTYRI----SKYTPSMSPTEVDKAIQMALHAWSTAVPLNFVRINSGEADIM-IS 169

Query: 183 FADAEHVQYDVHNNFVESRDPYPLDNVPGGVLAHAFFPRNG---NLHFDSAEEWTEGKED 353
           F   +H             D YP D  P G LAHAF P  G   + HFD+AE+WT G  +
Sbjct: 170 FETGDH------------GDSYPFDG-PRGTLAHAFAPGEGLGGDTHFDNAEKWTMGT-N 215

Query: 354 GINLRLVAAHEMGHAIGLFHSNDPNALMAPWYGGYISENDFKLPDDDSQGAAFIYGTKN- 530
           G NL  VAAHE GHA+GL HS DP+ALM P Y  Y +   F LP DD +G   +YG +  
Sbjct: 216 GFNLFTVAAHEFGHALGLGHSTDPSALMYPTY-KYQNPYRFHLPKDDVKGIQALYGPRKI 274

Query: 531 --GKVFVRSNKKREQSANEKELCNITNINSAFQYSDDNIYVVTDKNKVFRIIHSNNSFRV 704
             GK  +      + S    +LC+ ++   A       +    D+    R +H     R 
Sbjct: 275 FPGKPTMPHIPPHKPSI--PDLCDSSSSFDAVTMLGKELLFFKDRIFWRRQVHLPTGIR- 331

Query: 705 DASFKTLQLPNQLFDSDALFYDYSGRRFVFFKGNRVFSANGVKLE 839
             S  T   P  + + DA +         FFKG   +   G  ++
Sbjct: 332 -PSTITSSFPQLMSNVDAAYEVAERGIAFFFKGPHYWVTRGFHMQ 375
>sp|O77656|MMP13_BOVIN Collagenase 3 precursor (Matrix metalloproteinase-13) (MMP-13)
          Length = 471

 Score =  111 bits (277), Expect = 3e-24
 Identities = 87/290 (30%), Positives = 125/290 (43%), Gaps = 10/290 (3%)
 Frame = +3

Query: 6   KWDK-GTTYRFYIHDERHPTTMTLGEIQRALMIGLSYWSTAGDIYFAKVSNKQGSMFSLS 182
           KW K   TYR       +   +T  E+++A       WS    + F ++ N    +  +S
Sbjct: 112 KWSKMNLTYRIV----NYTPDLTHSEVEKAFRKAFKVWSDVTPLNFTRIHNGTADIM-IS 166

Query: 183 FADAEHVQYDVHNNFVESRDPYPLDNVPGGVLAHAFFPR---NGNLHFDSAEEWTEGKED 353
           F   EH  +            YP D  P G+LAHAF P     G+ HFD  E WT   + 
Sbjct: 167 FGTKEHGDF------------YPFDG-PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSK- 212

Query: 354 GINLRLVAAHEMGHAIGLFHSNDPNALMAPWYGGYISENDFKLPDDDSQGAAFIYGTKNG 533
           G NL LVAAHE GH++GL HS DP ALM P Y  Y  ++ F LPDDD QG   +YG  + 
Sbjct: 213 GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIY-TYTGKSHFMLPDDDVQGIQSLYGPGDE 271

Query: 534 KVFVRSNKKREQSANEKELCNITNINSAFQYSDDNIYVVTDKNKVFRIIHSNNSF----- 698
             + +  K  ++      L  IT++        D  +      +V   +    SF     
Sbjct: 272 DPYSKHPKTPDKCDPSLSLDAITSLRGETLIFKDRFFWRLHPQQVEAELFLTKSFGPELP 331

Query: 699 -RVDASFKTLQLPNQLFDSDALFYDYSGRRFVFFKGNRVFSANGVKLENL 845
            R+DA+++          S  L + + GR+F    G  +      K+  L
Sbjct: 332 NRIDAAYE--------HPSHDLIFIFRGRKFWALSGYDILEDYPKKISEL 373
>sp|O62806|MMP13_RABIT Collagenase 3 precursor (Matrix metalloproteinase-13) (MMP-13)
          Length = 471

 Score =  110 bits (275), Expect = 5e-24
 Identities = 87/279 (31%), Positives = 126/279 (45%), Gaps = 5/279 (1%)
 Frame = +3

Query: 6   KWDK-GTTYRFYIHDERHPTTMTLGEIQRALMIGLSYWSTAGDIYFAKVSNKQGSMFSLS 182
           KW +   TYR       +   +T  E+++A       WS    + F ++ N    +  +S
Sbjct: 112 KWSQTNLTYRIV----NYTPDLTHSEVEKAFKKAFKVWSDVTPLNFTRIHNGTADIM-IS 166

Query: 183 FADAEHVQYDVHNNFVESRDPYPLDNVPGGVLAHAFFPR---NGNLHFDSAEEWTEGKED 353
           F   EH  +            YP D  P G+LAHAF P     G+ HFD  E WT   + 
Sbjct: 167 FGTKEHGDF------------YPFDG-PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSK- 212

Query: 354 GINLRLVAAHEMGHAIGLFHSNDPNALMAPWYGGYISENDFKLPDDDSQGAAFIYGTKNG 533
           G NL LVAAHE GH++GL HS DP ALM P Y  Y  ++ F LPDDD QG   +YG  + 
Sbjct: 213 GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIY-TYTGKSHFMLPDDDVQGIQSLYGPGDE 271

Query: 534 KVFVRSNKKREQSANEKELCNITNINSAFQYSDDNIYVVTDKNKVFRIIHSNNSFRVDAS 713
               +  K  ++      L  IT++        D  +      +V   +    SF     
Sbjct: 272 DPNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAELFLTKSF----- 326

Query: 714 FKTLQLPNQLFDSDALFYDYSGRRFVF-FKGNRVFSANG 827
               +LPN++   DA  Y++  R  +F F+G + ++ NG
Sbjct: 327 --WPELPNRI---DAA-YEHPARDLIFIFRGKKFWAPNG 359
>sp|P33435|MMP13_MOUSE Collagenase 3 precursor (Matrix metalloproteinase-13) (MMP-13)
          Length = 472

 Score =  110 bits (274), Expect = 7e-24
 Identities = 87/279 (31%), Positives = 127/279 (45%), Gaps = 5/279 (1%)
 Frame = +3

Query: 6   KWDK-GTTYRFYIHDERHPTTMTLGEIQRALMIGLSYWSTAGDIYFAKVSNKQGSMFSLS 182
           KW +   TYR       +   M+  E+++A       WS    + F ++ +    +  +S
Sbjct: 113 KWSQTNLTYRIV----NYTPDMSHSEVEKAFRKAFKVWSDVTPLNFTRIYDGTADIM-IS 167

Query: 183 FADAEHVQYDVHNNFVESRDPYPLDNVPGGVLAHAFFPR---NGNLHFDSAEEWTEGKED 353
           F   EH  +            YP D  P G+LAHAF P     G+ HFD  E WT   + 
Sbjct: 168 FGTKEHGDF------------YPFDG-PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSK- 213

Query: 354 GINLRLVAAHEMGHAIGLFHSNDPNALMAPWYGGYISENDFKLPDDDSQGAAFIYGTKNG 533
           G NL +VAAHE+GH++GL HS DP ALM P Y  Y  ++ F LPDDD QG  F+YG  + 
Sbjct: 214 GYNLFIVAAHELGHSLGLDHSKDPGALMFPIY-TYTGKSHFMLPDDDVQGIQFLYGPGDE 272

Query: 534 KVFVRSNKKREQSANEKELCNITNINSAFQYSDDNIYVVTDKNKVFRIIHSNNSFRVDAS 713
               +  K  E+      L  IT++        D  +      +V   +    SF     
Sbjct: 273 DPNPKHPKTPEKCDPALSLDAITSLRGETMIFKDRFFWRLHPQQVEAELFLTKSF----- 327

Query: 714 FKTLQLPNQLFDSDALFYDYSGRRFVF-FKGNRVFSANG 827
               +LPN +   DA  Y++  R  +F F+G + ++ NG
Sbjct: 328 --WPELPNHV---DAA-YEHPSRDLMFIFRGRKFWALNG 360
>sp|O18927|MMP13_HORSE Collagenase 3 precursor (Matrix metalloproteinase-13) (MMP-13)
          Length = 472

 Score =  109 bits (273), Expect = 9e-24
 Identities = 87/279 (31%), Positives = 126/279 (45%), Gaps = 5/279 (1%)
 Frame = +3

Query: 6   KWDK-GTTYRFYIHDERHPTTMTLGEIQRALMIGLSYWSTAGDIYFAKVSNKQGSMFSLS 182
           KW K   TYR       +   +T  E+++A       WS    + F ++ N    +  +S
Sbjct: 113 KWPKMNLTYRIV----NYTPDLTHSEVEKAFKKAFKVWSDVTPLNFTRLYNGTADIM-IS 167

Query: 183 FADAEHVQYDVHNNFVESRDPYPLDNVPGGVLAHAFFPR---NGNLHFDSAEEWTEGKED 353
           F   EH  +            YP D  P G+LAHAF P     G+ HFD  E WT   + 
Sbjct: 168 FGTKEHGDF------------YPFDG-PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSK- 213

Query: 354 GINLRLVAAHEMGHAIGLFHSNDPNALMAPWYGGYISENDFKLPDDDSQGAAFIYGTKNG 533
           G NL LVAAHE GH++GL HS DP ALM P Y  Y  ++ F LPDDD QG  ++YG  + 
Sbjct: 214 GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIY-TYTGKSHFVLPDDDVQGIQYLYGPGDE 272

Query: 534 KVFVRSNKKREQSANEKELCNITNINSAFQYSDDNIYVVTDKNKVFRIIHSNNSFRVDAS 713
               +  K  ++      L  IT++        D  +       V   +    SF     
Sbjct: 273 DPNPKHPKTPDKCDPSLSLDAITSLRGETMVFKDRFFWRLHPQLVDAELFLTKSF----- 327

Query: 714 FKTLQLPNQLFDSDALFYDYSGRRFVF-FKGNRVFSANG 827
               +LPN++   DA  Y++  +  +F F+G + ++ NG
Sbjct: 328 --WPELPNRI---DAA-YEHPSKDLIFIFRGRKFWALNG 360
>sp|P45452|MMP13_HUMAN Collagenase 3 precursor (Matrix metalloproteinase-13) (MMP-13)
          Length = 471

 Score =  107 bits (267), Expect = 4e-23
 Identities = 86/278 (30%), Positives = 122/278 (43%), Gaps = 4/278 (1%)
 Frame = +3

Query: 6   KWDK-GTTYRFYIHDERHPTTMTLGEIQRALMIGLSYWSTAGDIYFAKVSNKQGSMFSLS 182
           KW K   TYR       +   MT  E+++A       WS    + F ++ +    +  +S
Sbjct: 112 KWSKMNLTYRIV----NYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIM-IS 166

Query: 183 FADAEHVQYDVHNNFVESRDPYPLDNVPGGVLAHAFFPR---NGNLHFDSAEEWTEGKED 353
           F   EH  +            YP D  P G+LAHAF P     G+ HFD  E WT   + 
Sbjct: 167 FGIKEHGDF------------YPFDG-PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSK- 212

Query: 354 GINLRLVAAHEMGHAIGLFHSNDPNALMAPWYGGYISENDFKLPDDDSQGAAFIYGTKNG 533
           G NL LVAAHE GH++GL HS DP ALM P Y  Y  ++ F LPDDD QG   +YG  + 
Sbjct: 213 GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIY-TYTGKSHFMLPDDDVQGIQSLYGPGDE 271

Query: 534 KVFVRSNKKREQSANEKELCNITNINSAFQYSDDNIYVVTDKNKVFRIIHSNNSFRVDAS 713
               +  K  ++      L  IT++        D  +      +V   +    SF     
Sbjct: 272 DPNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAELFLTKSF----- 326

Query: 714 FKTLQLPNQLFDSDALFYDYSGRRFVFFKGNRVFSANG 827
               +LPN++   DA +   S      F+G + ++ NG
Sbjct: 327 --WPELPNRI---DAAYEHPSHDLIFIFRGRKFWALNG 359
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,034,522
Number of Sequences: 369166
Number of extensions: 2093558
Number of successful extensions: 6362
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6205
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8838279920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)