Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_B05
(401 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P46088|GST_OMMSL Glutathione S-transferase (GST class-si... 56 2e-08
sp|P09792|GST28_SCHMA Glutathione S-transferase 28 kDa (GST... 55 4e-08
sp|P26624|GST28_SCHJA Glutathione S-transferase 28 kDa (GST... 54 9e-08
sp|P30113|GST28_SCHBO Glutathione S-transferase 28 kDa (GST... 51 7e-07
sp|P30114|GST28_SCHHA Glutathione S-transferase 28 kDa (GST... 51 1e-06
sp|O73888|PTGD2_CHICK Glutathione-requiring prostaglandin D... 50 2e-06
sp|O18598|GST1_BLAGE Glutathione S-transferase (GST class-s... 45 5e-05
sp|P91253|GST7_CAEEL Probable glutathione S-transferase 7 (... 44 1e-04
sp|P91254|GST8_CAEEL Probable glutathione S-transferase 8 (... 44 2e-04
sp|P30112|GST26_FASHE Glutathione S-transferase 26 kDa 51 (... 41 0.001
>sp|P46088|GST_OMMSL Glutathione S-transferase (GST class-sigma)
Length = 203
Score = 56.2 bits (134), Expect = 2e-08
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Frame = +2
Query: 5 YLIERAIGQMVDVLEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKESG----F 172
Y ++ + D+ + KI FAPE KE ++ + + R LEG + +G F
Sbjct: 86 YRVDEITETLQDIFNDVVKIKFAPEAAKEAVQQNYEKSCKR-LAPFLEGLLVSNGGGDGF 144
Query: 173 FVGEKITLAELF-FVVLTDYLEKLPKLYDDFPKLKELRERVLKANTDVEDWVKTRPVTD 346
FVG +TLA+L +V L L+ P+L D PK+ LR+RV + + ++K RPV D
Sbjct: 145 FVGNSMTLADLHCYVALEVPLKHTPELLKDCPKIVALRKRVAEC-PKIAAYLKKRPVRD 202
>sp|P09792|GST28_SCHMA Glutathione S-transferase 28 kDa (GST 28) (SM28 antigen)
(Protective 28 kDa antigen) (GST class-mu)
Length = 211
Score = 55.5 bits (132), Expect = 4e-08
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Frame = +2
Query: 2 YYLIERAIGQMVDVLEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES--GFF 175
YY +E+ IGQ DV +K P+E+KE + E + L + +K S
Sbjct: 92 YYSVEKLIGQAEDVEHEYHKTLMKPQEEKEKITKEILNGKVPVLLNMICESLKGSTGKLA 151
Query: 176 VGEKITLAELFFVVLTDYLEKLPK--LYDDFPKLKELRERVLKANTDVEDWVKTRPVT 343
VG+K+TLA+L + + D++ L K L +P++ + RE +L ++ + ++ RP T
Sbjct: 152 VGDKVTLADLVLIAVIDHVTDLDKGFLTGKYPEIHKHRENLLASSPRLAKYLSNRPAT 209
>sp|P26624|GST28_SCHJA Glutathione S-transferase 28 kDa (GST 28) (SJ28 antigen) (GST
class-mu)
Length = 206
Score = 54.3 bits (129), Expect = 9e-08
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Frame = +2
Query: 2 YYLIERAIGQMVDVLEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES--GFF 175
YY+IE+ IGQ+ DV +K P E+KE + E + L+++ +KES
Sbjct: 87 YYIIEKMIGQVEDVESEYHKTLIKPPEEKEKISKEILNGKVPILLQAICETLKESTGNLT 146
Query: 176 VGEKITLAELFFVVLTDYLEKLPK--LYDDFPKLKELRERVLKANTDVEDWVKTRPVT 343
VG+K+TLA++ + D++ L K L +P++ + R+ +L + + ++ R T
Sbjct: 147 VGDKVTLADVVLIASIDHITDLDKEFLTGKYPEIHKHRKHLLATSPKLAKYLSERHAT 204
>sp|P30113|GST28_SCHBO Glutathione S-transferase 28 kDa (GST 28) (GST class-mu)
Length = 211
Score = 51.2 bits (121), Expect = 7e-07
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Frame = +2
Query: 2 YYLIERAIGQMVDVLEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES--GFF 175
YY +E+ IGQ D+ YK PEE+K+ + E + L + +K S
Sbjct: 92 YYNVEKLIGQAEDLEHEYYKTLMKPEEEKQKIIKEILNGKVPVLLDIICESLKASTGKLA 151
Query: 176 VGEKITLAELFFVVLTDYLEKLPK--LYDDFPKLKELRERVLKANTDVEDWVKTRPVT 343
VG+K+TLA+L + + D++ L K L +P++ + RE +L ++ + ++ R T
Sbjct: 152 VGDKVTLADLVLIAVIDHVTDLDKEFLTGKYPEIHKHRENLLASSPRLAKYLSDRAAT 209
>sp|P30114|GST28_SCHHA Glutathione S-transferase 28 kDa (GST 28) (GST class-mu)
Length = 211
Score = 50.8 bits (120), Expect = 1e-06
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Frame = +2
Query: 2 YYLIERAIGQMVDVLEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES--GFF 175
YY +E+ IGQ+ D+ +K PEE+K+ + E + L + +K S
Sbjct: 92 YYNVEKLIGQVEDLEHEYHKTLMKPEEEKQKITKEILNGKVPVLLDIICESLKASTGKLA 151
Query: 176 VGEKITLAELFFVVLTDYLEKLPK--LYDDFPKLKELRERVLKANTDVEDWVKTRPVT 343
VG+K+TLA+L + + D++ L K L +P++ + RE +L ++ + ++ R T
Sbjct: 152 VGDKVTLADLVLIAVIDHVTDLDKEFLTGKYPEIHKHRENLLASSPRLAKYLSDRAAT 209
>sp|O73888|PTGD2_CHICK Glutathione-requiring prostaglandin D synthase
(Glutathione-dependent PGD synthetase) (Prostaglandin-H2
D-isomerase) (Hematopoietic prostaglandin D synthase)
(H-PGDS)
Length = 199
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Frame = +2
Query: 11 IERAIGQ-MVDVLEGMYKIYFAPEEKKEDLR----TEFVTTSGRDNLKSLEGFIKESGFF 175
+E+A+ +VD ++ + + F EK +D++ + +T + LK L+ F+ + +F
Sbjct: 83 VEQALADAIVDTIDD-FMMLFPWAEKNQDVKEKAFNDILTNKAPELLKDLDTFLGDKKWF 141
Query: 176 VGEKITLAELFF-VVLTDYLEKLPKLYDDFPKLKELRERVLKANTDVEDWVKTRPVT 343
VG+ +T A+ ++ V T L L D +P+L LR+RV +A + W++ RP T
Sbjct: 142 VGKSVTWADFYWDVCSTTLLSYKADLADKYPRLLALRDRV-EALPAIAAWIQKRPKT 197
>sp|O18598|GST1_BLAGE Glutathione S-transferase (GST class-sigma) (Major allergen Bla g
5)
Length = 204
Score = 45.1 bits (105), Expect = 5e-05
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +2
Query: 167 GFFVGEKITLAELFFVVLTDYLEKLPK--LYDDFPKLKELRERVLKANTDVEDWVKTRPV 340
G+ K+T A+ +FV + DYL + K L + P LK LRE+VL ++ WV RP
Sbjct: 143 GYLAAGKLTWADFYFVAILDYLNHMAKEDLVANQPNLKALREKVLGLPA-IKAWVAKRPP 201
Query: 341 TDM 349
TD+
Sbjct: 202 TDL 204
>sp|P91253|GST7_CAEEL Probable glutathione S-transferase 7 (GST class-sigma)
Length = 206
Score = 43.9 bits (102), Expect = 1e-04
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 164 SGFFVGEKITLAELFFVVLT-DYLEKLPKLYDDFPKLKELRERVLKANTDVEDWVKTRPV 340
SG+ VG+ +T +L T D L L D+FP+ K +E+V +N +++ W++TRPV
Sbjct: 145 SGYLVGDSLTFVDLLVAQHTADLLAANAALLDEFPQFKAHQEKV-HSNANIKKWLETRPV 203
Query: 341 T 343
T
Sbjct: 204 T 204
>sp|P91254|GST8_CAEEL Probable glutathione S-transferase 8 (GST class-sigma)
Length = 206
Score = 43.5 bits (101), Expect = 2e-04
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 164 SGFFVGEKITLAELFFVVLT-DYLEKLPKLYDDFPKLKELRERVLKANTDVEDWVKTRPV 340
SG+ VG+ +T +L T D L P L ++FP+ K +E+V +N +++ W++TRP
Sbjct: 145 SGYLVGDSLTFVDLLIAQHTADILSTDPALLEEFPQFKAHQEKV-HSNANIKKWLETRPE 203
Query: 341 T 343
T
Sbjct: 204 T 204
>sp|P30112|GST26_FASHE Glutathione S-transferase 26 kDa 51 (GST51) (FH51) (GST class-mu)
Length = 218
Score = 40.8 bits (94), Expect = 0.001
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Frame = +2
Query: 26 GQMVDVLEGMYKIYFAP--EEKKEDLRTEFVTTSGRDNLKSLEGFIKESGFFVGEKITLA 199
G +D+ G ++ + P EE K D E TT LK F+ + + G ++
Sbjct: 97 GAAMDLRMGFVRVCYNPKFEEVKGDYLKELPTT-----LKMWSNFLGDRHYLTGSPVSHV 151
Query: 200 ELFFVVLTDYLEKL-PKLYDDFPKLKELRERV-----LKANTDVEDWVK 328
+ D + L P+ +DFPKLKE + R+ +KA + E ++K
Sbjct: 152 DFMVYEALDCIRYLAPQCLEDFPKLKEFKSRIEDLPKIKAYMESEKFIK 200
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,513,466
Number of Sequences: 369166
Number of extensions: 791421
Number of successful extensions: 2951
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2946
length of database: 68,354,980
effective HSP length: 98
effective length of database: 50,250,950
effective search space used: 1758783250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)