Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_B02
(768 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 60 7e-09
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 55 2e-07
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 55 2e-07
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 55 2e-07
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 55 2e-07
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 55 3e-07
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 54 4e-07
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 54 4e-07
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 53 8e-07
sp|P08106|HSP70_CHICK Heat shock 70 kDa protein (HSP70) 53 8e-07
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 60.1 bits (144), Expect = 7e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 1 QTAEKEEYEHHQKELEKVCNPIMTKFYQ 84
QTAEKEEYEHHQKELEKVCNPI+TK YQ
Sbjct: 585 QTAEKEEYEHHQKELEKVCNPIITKLYQ 612
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 55.5 bits (132), Expect = 2e-07
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 1 QTAEKEEYEHHQKELEKVCNPIMTKFYQ 84
QTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 585 QTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 55.5 bits (132), Expect = 2e-07
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 1 QTAEKEEYEHHQKELEKVCNPIMTKFYQ 84
QTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 585 QTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 55.5 bits (132), Expect = 2e-07
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 1 QTAEKEEYEHHQKELEKVCNPIMTKFYQ 84
QTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 585 QTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 55.5 bits (132), Expect = 2e-07
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 1 QTAEKEEYEHHQKELEKVCNPIMTKFYQ 84
QTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 585 QTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 54.7 bits (130), Expect = 3e-07
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 1 QTAEKEEYEHHQKELEKVCNPIMTKFYQ 84
QTAEK+EYEH QK+LEKVCNPI+TK YQ
Sbjct: 585 QTAEKDEYEHQQKDLEKVCNPIITKLYQ 612
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 54.3 bits (129), Expect = 4e-07
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 1 QTAEKEEYEHHQKELEKVCNPIMTKFYQ 84
QTAEK++YEH QKELEKVCNPI+TK YQ
Sbjct: 592 QTAEKDQYEHKQKELEKVCNPIITKLYQ 619
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 54.3 bits (129), Expect = 4e-07
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 1 QTAEKEEYEHHQKELEKVCNPIMTKFYQ 84
QTAE+EE+EH QKELEKVCNPI+TK YQ
Sbjct: 585 QTAEREEFEHQQKELEKVCNPIITKLYQ 612
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 53.1 bits (126), Expect = 8e-07
Identities = 28/61 (45%), Positives = 31/61 (50%)
Frame = +1
Query: 1 QTAEKEEYEHHQKELEKVCNPIMTKFYQXXXXXXXXXXXXXXXXXXXXXXXXXXXTIEEV 180
QTAEK+E+EH QKELE VCNPI+TK YQ TIEEV
Sbjct: 584 QTAEKDEFEHRQKELESVCNPIITKLYQSAGGMPGGMPGGMPGGAPGAGSTGGGPTIEEV 643
Query: 181 D 183
D
Sbjct: 644 D 644
>sp|P08106|HSP70_CHICK Heat shock 70 kDa protein (HSP70)
Length = 634
Score = 53.1 bits (126), Expect = 8e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +1
Query: 1 QTAEKEEYEHHQKELEKVCNPIMTKFYQ 84
Q AEKEEYEH QKELEK+CNPI+TK YQ
Sbjct: 588 QMAEKEEYEHKQKELEKLCNPIVTKLYQ 615
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,617,239
Number of Sequences: 369166
Number of extensions: 1336366
Number of successful extensions: 3065
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3064
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7115329200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)