Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_A15
(782 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P43883|ADFP_MOUSE Adipophilin (Adipose differentiation-r... 37 0.047
sp|P19269|AMY1_DEBOC Alpha-amylase 1 precursor (1,4-alpha-D... 32 1.5
sp|Q00496|BXE_CLOBO Botulinum neurotoxin type E precursor (... 32 2.0
sp|P55737|HSP82_ARATH Heat shock protein 81-2 (HSP81-2) 32 2.6
sp|P51818|HSP83_ARATH Heat shock protein 81-3 (HSP81-3) (HS... 32 2.6
sp|P30995|BXE_CLOBU Botulinum neurotoxin type E precursor (... 32 2.6
sp|Q8AYI2|PRGR_RANDY Progesterone receptor (PR) (dyPR) 32 2.6
sp|P57498|CYSN_BUCAI Sulfate adenylyltransferase subunit 1 ... 32 2.6
sp|Q32065|YCX9_CHLRE Hypothetical 341.7 kDa protein in psbD... 32 2.6
sp|P03589|V125_AMVLE 125 kDa protein 31 3.3
>sp|P43883|ADFP_MOUSE Adipophilin (Adipose differentiation-related protein) (ADRP)
Length = 425
Score = 37.4 bits (85), Expect = 0.047
Identities = 51/250 (20%), Positives = 104/250 (41%), Gaps = 12/250 (4%)
Frame = +1
Query: 1 FACDQLDKLETKYPXXXXXXXXXXXXXGEYYDSSIKPNVDKMIAAKDSAVYIAKTPFRIT 180
+AC LD++E + P + +++A+ AV AK +
Sbjct: 82 YACKGLDRMEERLPI-------------------LNQPTSEIVASARGAVTGAKD---VV 119
Query: 181 GQTIEFLSNTTNSFVHRFMSKDKKAEYGAVEKKEYDILYRRALKEVNTILTFTLKNIEGL 360
T+ ++ S V + K K A G+VE+ + +++ ++ + G+
Sbjct: 120 TTTMAGAKDSVASTVSGVVDKTKGAVTGSVERTK-------------SVVNGSINTVLGM 166
Query: 361 SNVLNSIYDQSVTKNKEWLHGYY----EEFTDEMKKNSGDESKTESTVMQLAQNFSNKL- 525
+NS D ++TK++ + Y+ EE E KK G + + + + ++ S KL
Sbjct: 167 VQFMNSGVDNAITKSEMLVDQYFPLTQEELEMEAKKVEGFDMVQKPSNYERLESLSTKLC 226
Query: 526 -RVSVRAMSTVCYNHMSSGNKETLDLMFNKTEHIYSTLSKSTY------QEIRDQISIEN 684
R +A+S V ++ET+ + T H+ K+ + Q +D++ +
Sbjct: 227 SRAYHQALSRV--KEAKQKSQETIS-QLHSTVHLIEFARKNMHSANQKIQGAQDKLYVSW 283
Query: 685 IKWIGQNSIG 714
++W + SIG
Sbjct: 284 VEW--KRSIG 291
>sp|P19269|AMY1_DEBOC Alpha-amylase 1 precursor (1,4-alpha-D-glucan glucanohydrolase 1)
Length = 512
Score = 32.3 bits (72), Expect = 1.5
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +1
Query: 418 HGYYEEFTDEMKKNSGDESKTESTVMQLAQNFSNKLRVSVRAMSTVCYNHMS-SGNKETL 594
HGY+ + DE+ N G T + QLA ++ S+ M V YNH + +G+ ++
Sbjct: 116 HGYWMKNIDELNTNFG----TADELKQLASELHSR---SMLLMVDVVYNHYAWNGDGSSV 168
Query: 595 DLM----FNKTEHIYSTLSKSTYQEIRDQISIENIKWIGQNSIGL 717
D FN+ + + + Y DQ ++E+ W G + L
Sbjct: 169 DYSSFTPFNQQSYFHDYCLITNY---NDQTNVEDC-WEGDTEVSL 209
>sp|Q00496|BXE_CLOBO Botulinum neurotoxin type E precursor (BoNT/E) (Bontoxilysin E)
[Contains: Botulinum neurotoxin E light chain; Botulinum
neurotoxin E heavy chain]
Length = 1251
Score = 32.0 bits (71), Expect = 2.0
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 7/160 (4%)
Frame = +1
Query: 316 VNTILTFTLKNIEGLSN----VLNSIYDQSVTKNKEWLHGYYEEFTDEMKKNSGDESKTE 483
+ TIL FT+K+ G S+ V+ +I + ++++W Y ++ M K + +K +
Sbjct: 642 IPTILVFTIKSFLGSSDNKNKVIKAINNALKERDEKWKEVYSFIVSNWMTKINTQFNKRK 701
Query: 484 STVMQLAQNFSNKLRVSVRAMSTVCYNHMSSGNKETLDLMFNKTEHIYSTLSKSTYQEIR 663
+ Q QN V A+ T+ + +S E + + NK + K E+
Sbjct: 702 EQMYQALQN-------QVNAIKTIIESKYNSYTLEEKNELTNKYD------IKQIENELN 748
Query: 664 DQISI--ENI-KWIGQNSIGLLSNIKESLSAKYKVEVGQN 774
++SI NI +++ ++SI L I + E +N
Sbjct: 749 QKVSIAMNNIDRFLTESSISYLMKIINEVKINKLREYDEN 788
>sp|P55737|HSP82_ARATH Heat shock protein 81-2 (HSP81-2)
Length = 699
Score = 31.6 bits (70), Expect = 2.6
Identities = 20/87 (22%), Positives = 42/87 (48%)
Frame = +1
Query: 262 GAVEKKEYDILYRRALKEVNTILTFTLKNIEGLSNVLNSIYDQSVTKNKEWLHGYYEEFT 441
G V+ ++ + R + N IL KN+ + L ++ + +NKE + +YE F+
Sbjct: 358 GIVDSEDLPLNISRETLQQNKILKVIRKNL--VKKCLELFFE--IAENKEDYNKFYEAFS 413
Query: 442 DEMKKNSGDESKTESTVMQLAQNFSNK 522
+K ++S+ + + +L + S K
Sbjct: 414 KNLKLGIHEDSQNRTKIAELLRYHSTK 440
>sp|P51818|HSP83_ARATH Heat shock protein 81-3 (HSP81-3) (HSP81.2)
Length = 699
Score = 31.6 bits (70), Expect = 2.6
Identities = 20/87 (22%), Positives = 42/87 (48%)
Frame = +1
Query: 262 GAVEKKEYDILYRRALKEVNTILTFTLKNIEGLSNVLNSIYDQSVTKNKEWLHGYYEEFT 441
G V+ ++ + R + N IL KN+ + L ++ + +NKE + +YE F+
Sbjct: 358 GIVDSEDLPLNISRETLQQNKILKVIRKNL--VKKCLELFFE--IAENKEDYNKFYEAFS 413
Query: 442 DEMKKNSGDESKTESTVMQLAQNFSNK 522
+K ++S+ + + +L + S K
Sbjct: 414 KNLKLGIHEDSQNRTKIAELLRYHSTK 440
>sp|P30995|BXE_CLOBU Botulinum neurotoxin type E precursor (BoNT/E) (Bontoxilysin E)
[Contains: Botulinum neurotoxin E light chain; Botulinum
neurotoxin E heavy chain]
Length = 1251
Score = 31.6 bits (70), Expect = 2.6
Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Frame = +1
Query: 316 VNTILTFTLKNIEGLSN----VLNSIYDQSVTKNKEWLHGYYEEFTDEMKKNSGDESKTE 483
+ TIL FT+K+ G S+ V+ +I + ++++W Y ++ M K + +K +
Sbjct: 642 IPTILVFTIKSFLGSSDNKNKVIKAINNALKERDEKWKEVYSFIVSNWMTKINTQFNKRK 701
Query: 484 STVMQLAQNFSNKLRVSVRAMSTVCYNHMSSGNKETLDLMFNKTEHIYSTLSKSTYQEIR 663
+ Q QN N L+ + + YN + K L ++ E I + L++
Sbjct: 702 EQMYQALQNQVNALKAIIESK----YNSYTLEEKNELTNKYD-IEQIENELNQKV----- 751
Query: 664 DQISIENI-KWIGQNSIGLLSNIKESLSAKYKVEVGQN 774
I++ NI +++ ++SI L + + E +N
Sbjct: 752 -SIAMNNIDRFLTESSISYLMKLINEVKINKLREYDEN 788
>sp|Q8AYI2|PRGR_RANDY Progesterone receptor (PR) (dyPR)
Length = 711
Score = 31.6 bits (70), Expect = 2.6
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 536 SEPCQPCAIITCLRETRKRWILCSIKPSISTPPYQNQHI 652
++P P A++ L + +R +LC +K S S P ++N HI
Sbjct: 484 TKPETPSALLCSLNQLCERQLLCVVKWSKSLPGFRNMHI 522
>sp|P57498|CYSN_BUCAI Sulfate adenylyltransferase subunit 1 (Sulfate adenylate
transferase) (SAT) (ATP-sulfurylase large subunit)
Length = 473
Score = 31.6 bits (70), Expect = 2.6
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Frame = +1
Query: 181 GQTIEFLSNTTNSFVHRFMSKD---KKAEYG----AVEKKEYDILYRRALKEVNTILTFT 339
GQTI+ L NS V R ++ D KKAE G V K E DI +++IL +
Sbjct: 269 GQTIKILPENINSRVSRIVTFDKELKKAEIGESITVVLKDEIDINRGDFFVNIDSILQPS 328
Query: 340 LKNIEGL----SNVLNSIYDQSVTKNKEWLHGYYEEFTDEMKKNSGDESKTESTVMQLAQ 507
+ I + N+L + +V + + + Y +E ++ N+ + K+ S V+
Sbjct: 329 QEAIIDIVWMTDNILLAGESYNVKLSGKKIRVYIKEILFKLDVNTLKKVKSHSLVL---- 384
Query: 508 NFSNKLRVSVRAMSTVCYNHMS----SGNKETLDLMFNKT 615
++ RV + V +++ S +GN +DL+ N T
Sbjct: 385 --NSIGRVKIYFSKPVIFDNYSENRMTGNMIFIDLLTNIT 422
>sp|Q32065|YCX9_CHLRE Hypothetical 341.7 kDa protein in psbD-psbC intergenic region
(ORF2971) (ORFB)
Length = 2971
Score = 31.6 bits (70), Expect = 2.6
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 481 ESTVMQLAQNFSNKLRVSVRAMSTVCYNHMSSGNKETLDLMFNKTEHIYSTLSKSTYQEI 660
+S ++A +F N L +S++ YN++S NK L K ++S + + +
Sbjct: 435 DSESQEVATSFQNDL-ISIKYCFNNLYNYIS--NKTALS---TKNLFLFSAIKSNATKHK 488
Query: 661 RDQ--ISIENIKWIGQNSIGLLSNIKESLSA 747
R Q S+EN +G NS + + K S++A
Sbjct: 489 RTQSFFSVENTTTLGNNSNFVKGHFKSSINA 519
>sp|P03589|V125_AMVLE 125 kDa protein
Length = 1126
Score = 31.2 bits (69), Expect = 3.3
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Frame = +1
Query: 292 LYRRALKEVNTILTFTLKNIEGLSNVLNS-IYDQSV--TKNKEWLHG-------YYEEFT 441
LY+ K++ T+ +F L I+G S +++ +Y QS+ EW G Y
Sbjct: 556 LYQSFQKKIETVFSFILGKIDGPSPLISDPVYFQSLEDVYYAEWHQGNAIDASNYARTLL 615
Query: 442 DEMKKNSGDESKTESTVMQLAQNFSNKLRVSVRAMSTVCYNHMSSGNKETLDL 600
D+++K + K ++ ++ AQ KL ++ + H G E L L
Sbjct: 616 DDIRKQKEESLKAKAKEVEDAQ----KLNRAILQVHAYLEAHPDGGKIEGLGL 664
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.312 0.127 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,171,438
Number of Sequences: 369166
Number of extensions: 1745551
Number of successful extensions: 3645
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3645
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7357347200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)