Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_P10
(912 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 516 e-146
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 516 e-146
sp|P53458|ACT5_DIPDE Actin-5 516 e-146
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 516 e-146
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 516 e-146
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 516 e-146
sp|P92176|ACT2_LUMTE Actin-2 515 e-146
sp|P12716|ACTC_PISOC Actin, cytoplasmic 515 e-146
sp|P53470|ACT1_SCHMA Actin-1 514 e-145
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 514 e-145
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 516 bits (1330), Expect = e-146
Identities = 253/269 (94%), Positives = 263/269 (97%)
Frame = +1
Query: 10 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 189
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
Query: 190 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 369
EGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 370 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 549
M+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCD
Sbjct: 228 MQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCD 287
Query: 550 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 729
VDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 730 ASLSTFQQMWISKQEYDESGPGIVHRKCF 816
ASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 516 bits (1330), Expect = e-146
Identities = 253/269 (94%), Positives = 264/269 (98%)
Frame = +1
Query: 10 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 189
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
Query: 190 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 369
EGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 370 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 549
M+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCD
Sbjct: 228 MQTATSSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCD 287
Query: 550 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 729
VDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 730 ASLSTFQQMWISKQEYDESGPGIVHRKCF 816
ASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 516 bits (1329), Expect = e-146
Identities = 255/269 (94%), Positives = 263/269 (97%)
Frame = +1
Query: 10 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 189
EAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY
Sbjct: 103 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 162
Query: 190 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 369
EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 163 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 222
Query: 370 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 549
M A++SS+LEKSYELPDGQVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCD
Sbjct: 223 MSNAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCD 282
Query: 550 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 729
VDIRKDLYAN VLSGGSTMYPGI+DRMQKEISALAP TMKIKIVAPPERKYSVWIGGSIL
Sbjct: 283 VDIRKDLYANTVLSGGSTMYPGISDRMQKEISALAPSTMKIKIVAPPERKYSVWIGGSIL 342
Query: 730 ASLSTFQQMWISKQEYDESGPGIVHRKCF 816
ASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 343 ASLSTFQQMWISKQEYDESGPGIVHRKCF 371
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 516 bits (1328), Expect = e-146
Identities = 252/269 (93%), Positives = 263/269 (97%)
Frame = +1
Query: 10 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 189
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIY 167
Query: 190 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 369
EGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 370 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 549
M+TAS SSSLEKSYELPDGQVITIGNERFRCPEA++QPSFLG+ES GIHETTYNSIMKCD
Sbjct: 228 MQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCD 287
Query: 550 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 729
VDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 730 ASLSTFQQMWISKQEYDESGPGIVHRKCF 816
ASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 516 bits (1328), Expect = e-146
Identities = 253/269 (94%), Positives = 262/269 (97%)
Frame = +1
Query: 10 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 189
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
Query: 190 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 369
EGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 370 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 549
M TA+ SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTYNSIMKCD
Sbjct: 228 MHTAATSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCD 287
Query: 550 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 729
VDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 730 ASLSTFQQMWISKQEYDESGPGIVHRKCF 816
ASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 516 bits (1328), Expect = e-146
Identities = 252/269 (93%), Positives = 263/269 (97%)
Frame = +1
Query: 10 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 189
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 167
Query: 190 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 369
EGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 370 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 549
M+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCD
Sbjct: 228 MQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCD 287
Query: 550 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 729
VDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 730 ASLSTFQQMWISKQEYDESGPGIVHRKCF 816
ASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 515 bits (1327), Expect = e-146
Identities = 254/269 (94%), Positives = 263/269 (97%)
Frame = +1
Query: 10 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 189
EAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
Query: 190 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 369
EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 370 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 549
M TASASSSLEKSYELPDGQVITIGNERFRCPEA+F SFLG+ESVGIHETTYNSIMKCD
Sbjct: 228 MNTASASSSLEKSYELPDGQVITIGNERFRCPEAMFHASFLGMESVGIHETTYNSIMKCD 287
Query: 550 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 729
VDIRKDLYAN VLSGG+TM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 730 ASLSTFQQMWISKQEYDESGPGIVHRKCF 816
ASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 515 bits (1326), Expect = e-146
Identities = 252/269 (93%), Positives = 263/269 (97%)
Frame = +1
Query: 10 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 189
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV DSGDGV+HTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIY 167
Query: 190 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 369
EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 370 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 549
M+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCD
Sbjct: 228 MQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCD 287
Query: 550 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 729
VDIRKDLYAN VLSGGSTM+PGIADRMQKE++ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEVTALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 730 ASLSTFQQMWISKQEYDESGPGIVHRKCF 816
ASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P53470|ACT1_SCHMA Actin-1
Length = 376
Score = 514 bits (1325), Expect = e-145
Identities = 254/269 (94%), Positives = 263/269 (97%)
Frame = +1
Query: 10 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 189
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
Query: 190 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 369
EGYALPHAILRLDLAGRDLTDY+MKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 370 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 549
M TA++SS+LEKSYELPDGQVITIGNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCD
Sbjct: 228 MGTAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEASGIHETTYNSIMKCD 287
Query: 550 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 729
VDIRKDLY+N VLSGGSTMYPGIADRMQKEISALAP TMKIKIVAPPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYSNTVLSGGSTMYPGIADRMQKEISALAPSTMKIKIVAPPERKYSVWIGGSIL 347
Query: 730 ASLSTFQQMWISKQEYDESGPGIVHRKCF 816
ASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 348 ASLSTFQQMWISKQEYDESGPGIVHRKCF 376
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 514 bits (1325), Expect = e-145
Identities = 252/269 (93%), Positives = 262/269 (97%)
Frame = +1
Query: 10 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 189
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 167
Query: 190 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 369
EGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 370 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 549
M+TAS SSSLEKSYELPDGQVITIGNERFRCPEA FQPSFLG+E+ GIHETTYNSIMKCD
Sbjct: 228 MQTASTSSSLEKSYELPDGQVITIGNERFRCPEATFQPSFLGMEAAGIHETTYNSIMKCD 287
Query: 550 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 729
VDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 730 ASLSTFQQMWISKQEYDESGPGIVHRKCF 816
ASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 348 ASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,105,990
Number of Sequences: 369166
Number of extensions: 2181178
Number of successful extensions: 6466
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6298
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9270587090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)