Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_P07
(407 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 92 5e-19
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 88 6e-18
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 86 4e-17
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 86 4e-17
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 86 4e-17
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 86 4e-17
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 86 4e-17
sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hs... 84 1e-16
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 83 2e-16
sp|Q91291|HSP70_PLEWA Heat shock 70 kDa protein (HSP70) 83 2e-16
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 91.7 bits (226), Expect = 5e-19
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +3
Query: 3 LSESDRKAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 155
+S+ D+ I++KC+EVIGWLD NQTAEKEEYEHHQKELEKVCNPI+TK YQ
Sbjct: 562 ISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQ 612
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 88.2 bits (217), Expect = 6e-18
Identities = 37/51 (72%), Positives = 46/51 (90%)
Frame = +3
Query: 3 LSESDRKAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 155
+S+ D++ I+DKC+EVIGWLD NQTAE+EE+EH QKELEKVCNPI+TK YQ
Sbjct: 562 ISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQ 612
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 85.5 bits (210), Expect = 4e-17
Identities = 35/51 (68%), Positives = 45/51 (88%)
Frame = +3
Query: 3 LSESDRKAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 155
+++ D++ I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 562 INDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 85.5 bits (210), Expect = 4e-17
Identities = 35/51 (68%), Positives = 45/51 (88%)
Frame = +3
Query: 3 LSESDRKAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 155
+++ D++ I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 562 INDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 85.5 bits (210), Expect = 4e-17
Identities = 35/51 (68%), Positives = 45/51 (88%)
Frame = +3
Query: 3 LSESDRKAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 155
+++ D++ I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 562 INDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 85.5 bits (210), Expect = 4e-17
Identities = 35/51 (68%), Positives = 45/51 (88%)
Frame = +3
Query: 3 LSESDRKAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 155
+++ D++ I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 562 INDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 85.5 bits (210), Expect = 4e-17
Identities = 36/51 (70%), Positives = 44/51 (86%)
Frame = +3
Query: 3 LSESDRKAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 155
+S+ D+ I+DKC+EVI WLD NQTAEK+EYEH QK+LEKVCNPI+TK YQ
Sbjct: 562 ISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQ 612
>sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hsc70.1)
Length = 686
Score = 83.6 bits (205), Expect = 1e-16
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = +3
Query: 3 LSESDRKAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 155
+S+ D++ I+DKC+EVI WLD NQTAE++EY H QKELEKVCNPI+TK YQ
Sbjct: 560 ISDEDKQKILDKCNEVISWLDKNQTAERDEYVHQQKELEKVCNPIITKLYQ 610
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 83.2 bits (204), Expect = 2e-16
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +3
Query: 3 LSESDRKAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 155
+SE D+K II KC+E + W+D NQTAEK++YEH QKELEKVCNPI+TK YQ
Sbjct: 569 ISEEDKKTIIKKCNETVEWVDKNQTAEKDQYEHKQKELEKVCNPIITKLYQ 619
>sp|Q91291|HSP70_PLEWA Heat shock 70 kDa protein (HSP70)
Length = 645
Score = 83.2 bits (204), Expect = 2e-16
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +3
Query: 3 LSESDRKAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 155
+SE DRK I+DKC++ I W+++NQ AEKEEYEH QKELEKVCN I+TK YQ
Sbjct: 564 ISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITKLYQ 614
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,289,178
Number of Sequences: 369166
Number of extensions: 685082
Number of successful extensions: 2142
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2142
length of database: 68,354,980
effective HSP length: 98
effective length of database: 50,250,950
effective search space used: 1859285150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)