Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_O17
(815 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P83750|ACTB_CYPCA Actin, cytoplasmic 1 (Beta-actin) >gi|... 546 e-155
sp|Q7ZVI7|ACTB1_BRARE Actin, cytoplasmic 1 (Beta-actin-1) 546 e-155
sp|P53485|ACT2_FUGRU Actin, cytoplasmic 2 (Beta-actin-2) 546 e-155
sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin) 545 e-155
sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin) >gi|... 545 e-155
sp|P91754|ACT_LUMRU Actin 545 e-155
sp|P92182|ACT1_LUMTE Actin-1 545 e-155
sp|P53471|ACT2_SCHMA Actin-2 544 e-154
sp|P30163|ACT2_ONCVO Actin-2 544 e-154
sp|P60712|ACTB_BOVIN Actin, cytoplasmic 1 (Beta-actin) >gi|... 544 e-154
>sp|P83750|ACTB_CYPCA Actin, cytoplasmic 1 (Beta-actin)
sp|P83751|ACTB_CTEID Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 546 bits (1407), Expect = e-155
Identities = 268/271 (98%), Positives = 270/271 (99%)
Frame = +3
Query: 3 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 182
KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 18 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 77
Query: 183 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 362
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 78 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 137
Query: 363 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 542
AVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
Query: 543 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 722
YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC
Sbjct: 198 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 257
Query: 723 PESLFQPSFLGMESAGIHETTFNSIMKCDVD 815
PE+LFQPSFLGMES GIHETTFNSIMKCDVD
Sbjct: 258 PEALFQPSFLGMESCGIHETTFNSIMKCDVD 288
>sp|Q7ZVI7|ACTB1_BRARE Actin, cytoplasmic 1 (Beta-actin-1)
Length = 375
Score = 546 bits (1407), Expect = e-155
Identities = 268/271 (98%), Positives = 270/271 (99%)
Frame = +3
Query: 3 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 182
KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 18 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 77
Query: 183 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 362
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 78 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 137
Query: 363 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 542
AVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
Query: 543 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 722
YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC
Sbjct: 198 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 257
Query: 723 PESLFQPSFLGMESAGIHETTFNSIMKCDVD 815
PE+LFQPSFLGMES GIHETTFNSIMKCDVD
Sbjct: 258 PEALFQPSFLGMESCGIHETTFNSIMKCDVD 288
>sp|P53485|ACT2_FUGRU Actin, cytoplasmic 2 (Beta-actin-2)
Length = 375
Score = 546 bits (1407), Expect = e-155
Identities = 268/271 (98%), Positives = 270/271 (99%)
Frame = +3
Query: 3 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 182
KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 18 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 77
Query: 183 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 362
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 78 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 137
Query: 363 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 542
AVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
Query: 543 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 722
YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC
Sbjct: 198 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 257
Query: 723 PESLFQPSFLGMESAGIHETTFNSIMKCDVD 815
PE+LFQPSFLGMES GIHETTFNSIMKCDVD
Sbjct: 258 PEALFQPSFLGMESCGIHETTFNSIMKCDVD 288
>sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 545 bits (1404), Expect = e-155
Identities = 267/271 (98%), Positives = 270/271 (99%)
Frame = +3
Query: 3 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 182
KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 18 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 77
Query: 183 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 362
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 78 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 137
Query: 363 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 542
AVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
Query: 543 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 722
YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC
Sbjct: 198 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 257
Query: 723 PESLFQPSFLGMESAGIHETTFNSIMKCDVD 815
PE+LFQPSFLGMES GIHETT+NSIMKCDVD
Sbjct: 258 PEALFQPSFLGMESCGIHETTYNSIMKCDVD 288
>sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin)
sp|P68142|ACT1_FUGRU Actin, cytoplasmic 1 (Beta-actin-1)
Length = 375
Score = 545 bits (1404), Expect = e-155
Identities = 267/271 (98%), Positives = 270/271 (99%)
Frame = +3
Query: 3 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 182
KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 18 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 77
Query: 183 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 362
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 78 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 137
Query: 363 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 542
AVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
Query: 543 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 722
YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC
Sbjct: 198 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 257
Query: 723 PESLFQPSFLGMESAGIHETTFNSIMKCDVD 815
PE+LFQPSFLGMES GIHETT+NSIMKCDVD
Sbjct: 258 PEALFQPSFLGMESCGIHETTYNSIMKCDVD 288
>sp|P91754|ACT_LUMRU Actin
Length = 372
Score = 545 bits (1404), Expect = e-155
Identities = 267/271 (98%), Positives = 271/271 (100%)
Frame = +3
Query: 3 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 182
KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 15 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 74
Query: 183 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 362
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 75 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 134
Query: 363 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 542
AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 135 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 194
Query: 543 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 722
YSFTTTAEREIVRDIKEKLCYVALDF+QEMGTAASSSSLEKSYELPDGQVITIGNERFRC
Sbjct: 195 YSFTTTAEREIVRDIKEKLCYVALDFDQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 254
Query: 723 PESLFQPSFLGMESAGIHETTFNSIMKCDVD 815
PES+FQP+FLGMESAGIHETTFNSIMKCDVD
Sbjct: 255 PESMFQPAFLGMESAGIHETTFNSIMKCDVD 285
>sp|P92182|ACT1_LUMTE Actin-1
Length = 376
Score = 545 bits (1404), Expect = e-155
Identities = 267/271 (98%), Positives = 271/271 (100%)
Frame = +3
Query: 3 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 182
KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 19 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 78
Query: 183 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 362
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Query: 363 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 542
AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 139 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Query: 543 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 722
YSFTTTAEREIVRDIKEKLCYVALDF+QEMGTAASSSSLEKSYELPDGQVITIGNERFRC
Sbjct: 199 YSFTTTAEREIVRDIKEKLCYVALDFDQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 258
Query: 723 PESLFQPSFLGMESAGIHETTFNSIMKCDVD 815
PES+FQP+FLGMESAGIHETTFNSIMKCDVD
Sbjct: 259 PESMFQPAFLGMESAGIHETTFNSIMKCDVD 289
>sp|P53471|ACT2_SCHMA Actin-2
Length = 376
Score = 544 bits (1402), Expect = e-154
Identities = 267/271 (98%), Positives = 269/271 (99%)
Frame = +3
Query: 3 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 182
KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 19 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 78
Query: 183 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 362
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 138
Query: 363 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 542
AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 139 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Query: 543 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 722
YSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRC
Sbjct: 199 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRC 258
Query: 723 PESLFQPSFLGMESAGIHETTFNSIMKCDVD 815
PE+LFQPSFLGMESAG+HETTFNSIMKCDVD
Sbjct: 259 PEALFQPSFLGMESAGVHETTFNSIMKCDVD 289
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 544 bits (1402), Expect = e-154
Identities = 266/271 (98%), Positives = 270/271 (99%)
Frame = +3
Query: 3 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 182
KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 19 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 78
Query: 183 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 362
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 363 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 542
AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 139 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Query: 543 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 722
YSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVIT+GNERFRC
Sbjct: 199 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRC 258
Query: 723 PESLFQPSFLGMESAGIHETTFNSIMKCDVD 815
PE+LFQPSFLGMESAGIHETT+NSIMKCD+D
Sbjct: 259 PEALFQPSFLGMESAGIHETTYNSIMKCDID 289
>sp|P60712|ACTB_BOVIN Actin, cytoplasmic 1 (Beta-actin)
sp|P60713|ACTB_SHEEP Actin, cytoplasmic 1 (Beta-actin)
sp|Q5R1X3|ACTB_PANTR Actin, cytoplasmic 1 (Beta-actin)
sp|P60710|ACTB_MOUSE Actin, cytoplasmic 1 (Beta-actin)
sp|Q711N9|ACTB_MESAU Actin, cytoplasmic 1 (Beta-actin)
sp|P60708|ACTB_HORSE Actin, cytoplasmic 1 (Beta-actin)
sp|Q76N69|ACTB_CERAE Actin, cytoplasmic 1 (Beta-actin)
sp|Q71FK5|ACTB_CAVPO Actin, cytoplasmic 1 (Beta-actin)
sp|P60707|ACTB_TRIVU Actin, cytoplasmic 1 (Beta-actin)
sp|P60711|ACTB_RAT Actin, cytoplasmic 1 (Beta-actin)
sp|P60709|ACTB_HUMAN Actin, cytoplasmic 1 (Beta-actin)
sp|P60706|ACTB_CHICK Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 544 bits (1401), Expect = e-154
Identities = 267/271 (98%), Positives = 269/271 (99%)
Frame = +3
Query: 3 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 182
KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 18 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 77
Query: 183 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 362
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 78 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 137
Query: 363 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 542
AVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
Query: 543 YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRC 722
YSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRC
Sbjct: 198 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRC 257
Query: 723 PESLFQPSFLGMESAGIHETTFNSIMKCDVD 815
PE+LFQPSFLGMES GIHETTFNSIMKCDVD
Sbjct: 258 PEALFQPSFLGMESCGIHETTFNSIMKCDVD 288
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,123,394
Number of Sequences: 369166
Number of extensions: 1898363
Number of successful extensions: 5757
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5601
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7811456130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)