Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_O13
(795 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 272 7e-73
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 271 1e-72
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 270 3e-72
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 267 2e-71
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 264 2e-70
sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor 257 3e-68
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 256 4e-68
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 256 4e-68
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 254 1e-67
sp|P61277|CATK_MACMU Cathepsin K precursor >gi|47117667|sp|... 252 7e-67
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 272 bits (696), Expect = 7e-73
Identities = 136/263 (51%), Positives = 172/263 (65%), Gaps = 1/263 (0%)
Frame = +1
Query: 4 LNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMT 183
L+ +W +K T R Y + RR +WE+N+K I+ HN EY GKH +++ +N F DMT
Sbjct: 25 LDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMT 84
Query: 184 NEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFS 363
NEEF+ + +G + + +G + P + LP SVDWR+KGYVTPVKNQ+QCGSCW+FS
Sbjct: 85 NEEFR-QMMGCFRNQKFRKGKVFREPLFLD-LPKSVDWRKKGYVTPVKNQKQCGSCWAFS 142
Query: 364 ATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDY 540
ATG+LEGQ FRK +L+S SEQ LVDCS M AF+Y+K+ G++SE Y
Sbjct: 143 ATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESY 202
Query: 541 PYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKS 720
PY A D CK P V TGFT + E L AVATVGP+SVA+DAGH+SFQ YKS
Sbjct: 203 PYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKS 262
Query: 721 GIYNEESCSTTQLDHGVLAVGYG 789
GIY E CS+ LDHGVL VGYG
Sbjct: 263 GIYFEPDCSSKNLDHGVLVVGYG 285
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 271 bits (693), Expect = 1e-72
Identities = 140/263 (53%), Positives = 169/263 (64%), Gaps = 1/263 (0%)
Frame = +1
Query: 4 LNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMT 183
L +W +K R Y + RR +WE+N+K I+ HN EY GKH++++ +N F DMT
Sbjct: 25 LEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMT 84
Query: 184 NEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFS 363
+EEF+ G KP +G + P P SVDWR+KGYVTPVKNQ QCGSCW+FS
Sbjct: 85 SEEFRQVMNGFQNRKPR-KGKVFQEPLFYEA-PRSVDWREKGYVTPVKNQGQCGSCWAFS 142
Query: 364 ATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDY 540
ATG+LEGQ FRK RLIS SEQ LVDCS LMD AF+Y++D G++SE Y
Sbjct: 143 ATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESY 202
Query: 541 PYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKS 720
PY AT+ +CK NP V TGF DI Q E L AVATVGP+SVAIDAGH SF YK
Sbjct: 203 PYEATEESCKYNPKYSVANDTGFVDIPKQ-EKALMKAVATVGPISVAIDAGHESFLFYKE 261
Query: 721 GIYNEESCSTTQLDHGVLAVGYG 789
GIY E CS+ +DHGVL VGYG
Sbjct: 262 GIYFEPDCSSEDMDHGVLVVGYG 284
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 270 bits (690), Expect = 3e-72
Identities = 140/264 (53%), Positives = 168/264 (63%), Gaps = 2/264 (0%)
Frame = +1
Query: 4 LNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMT 183
LN +W +K T R Y + RR +WE+N+K I+ HN EY GKH +++ +N F DMT
Sbjct: 25 LNAQWYQWKATHRRLYGMNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMT 84
Query: 184 NEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFS 363
NEEF+ G K +G + P +P SVDWR+KGYVTPVKNQ QCGSCW+FS
Sbjct: 85 NEEFRQVMNGFQNQKHK-KGKMFQEPL-FAEIPKSVDWREKGYVTPVKNQGQCGSCWAFS 142
Query: 364 ATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDY 540
ATG+LEGQ FRK +L+S SEQ LVDCS LMDNAFRY+KD G++SE Y
Sbjct: 143 ATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESY 202
Query: 541 PYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 717
PY D TC P TGF D+ Q E L AVAT+GP+SVAIDAGH SFQ YK
Sbjct: 203 PYLGRDTETCNYKPECSAANDTGFVDL-PQREKALMKAVATLGPISVAIDAGHQSFQFYK 261
Query: 718 SGIYNEESCSTTQLDHGVLAVGYG 789
SGIY + CS+ LDHGVL VGYG
Sbjct: 262 SGIYFDPDCSSKDLDHGVLVVGYG 285
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 267 bits (683), Expect = 2e-71
Identities = 142/264 (53%), Positives = 165/264 (62%), Gaps = 2/264 (0%)
Frame = +1
Query: 4 LNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMT 183
L+ W +K T R Y + RR +WE+N K I HN EY GKH + + +N F DMT
Sbjct: 25 LDAHWHQWKATHRRLYGMNEEEWRRAVWEKNKKIIDLHNQEYSEGKHAFRMAMNAFGDMT 84
Query: 184 NEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFS 363
NEEF+ G K +G + P + V P SVDW +KGYVTPVKNQ QCGSCW+FS
Sbjct: 85 NEEFRQVMNGFQNQKHK-KGKLFHEPLLVDV-PKSVDWTKKGYVTPVKNQGQCGSCWAFS 142
Query: 364 ATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDY 540
ATG+LEGQ FRK +L+S SEQ LVDCS LMDNAF+YIKD G++SE Y
Sbjct: 143 ATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESY 202
Query: 541 PYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 717
PY ATD +C P TGF DI Q E L AVATVGP+SVAIDAGH SFQ YK
Sbjct: 203 PYLATDTNSCNYKPECSAANDTGFVDI-PQREKALMKAVATVGPISVAIDAGHTSFQFYK 261
Query: 718 SGIYNEESCSTTQLDHGVLAVGYG 789
SGIY + CS LDHGVL VGYG
Sbjct: 262 SGIYYDPDCSCKDLDHGVLVVGYG 285
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 264 bits (674), Expect = 2e-70
Identities = 138/264 (52%), Positives = 169/264 (64%), Gaps = 2/264 (0%)
Frame = +1
Query: 4 LNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMT 183
L+ +W +K T GR Y + RR +WE+N+K I+ HN EY GKH +S+ +N F DMT
Sbjct: 25 LDADWYKWKATHGRLYGMNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMT 84
Query: 184 NEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFS 363
NEEF+ G K +G + + V P SVDWR+KGYVT VKNQ QCGSCW+FS
Sbjct: 85 NEEFRQVMNGFQNQKHK-KGKVFHESLVLEV-PKSVDWREKGYVTAVKNQGQCGSCWAFS 142
Query: 364 ATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDY 540
ATG+LEGQ FRK +L+S SEQ LVDCS LMDNAF+Y+KD G+++E Y
Sbjct: 143 ATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESY 202
Query: 541 PYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 717
PY + +C P TGF DI Q E L AVATVGP+SVAIDAGH+SFQ YK
Sbjct: 203 PYLGRETNSCTYKPECSAANDTGFVDI-PQREKALMKAVATVGPISVAIDAGHSSFQFYK 261
Query: 718 SGIYNEESCSTTQLDHGVLAVGYG 789
SGIY + CS+ LDHGVL VGYG
Sbjct: 262 SGIYYDPDCSSKDLDHGVLVVGYG 285
>sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor
Length = 326
Score = 257 bits (656), Expect = 3e-68
Identities = 124/260 (47%), Positives = 166/260 (63%)
Frame = +1
Query: 16 WETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEF 195
W +K + ++Y+ D RR IWE+N+K+IQ+HNL +DLG TY+LGLNQF DMT EEF
Sbjct: 21 WHQWKRMYNKEYNGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEF 80
Query: 196 KAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGS 375
KAKYL M + N +P +DWR+ GYVT VK+Q CGSCW+FS TG+
Sbjct: 81 KAKYLTEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGT 140
Query: 376 LEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQGIESEGDYPYTAT 555
+EGQY + ISFSEQQLVDCS LM+NA++Y+K G+E+E YPYTA
Sbjct: 141 MEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPYTAV 200
Query: 556 DGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKSGIYNE 735
+G C+ N V K TG+ + S +E +L N V P +VA+D + F +Y+SGIY
Sbjct: 201 EGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDV-ESDFMMYRSGIYQS 259
Query: 736 ESCSTTQLDHGVLAVGYGTQ 795
++CS +++H VLAVGYGTQ
Sbjct: 260 QTCSPLRVNHAVLAVGYGTQ 279
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 256 bits (655), Expect = 4e-68
Identities = 137/260 (52%), Positives = 165/260 (63%), Gaps = 1/260 (0%)
Frame = +1
Query: 13 EWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEE 192
EW +K+T R Y + RR IWE+N++ IQ HN EY G+H +S+ +N F DMTNEE
Sbjct: 28 EWHQWKSTHRRLYGTNEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEE 87
Query: 193 FKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATG 372
F+ G K +G + P + + P SVDWR+KG VTPVKNQ QCGSCW+FSA+G
Sbjct: 88 FRQVVNGYRHQKHK-KGRLFQEPLMLKI-PKSVDWREKGCVTPVKNQGQCGSCWAFSASG 145
Query: 373 SLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYPYT 549
LEGQ F K +LIS SEQ LVDCS LMD AF+YIK+ G++SE YPY
Sbjct: 146 CLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYE 205
Query: 550 ATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKSGIY 729
A DG+CK V TGF DI Q E L AVATVGP+SVA+DA H S Q Y SGIY
Sbjct: 206 AKDGSCKYRAEFAVANDTGFVDI-PQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIY 264
Query: 730 NEESCSTTQLDHGVLAVGYG 789
E +CS+ LDHGVL VGYG
Sbjct: 265 YEPNCSSKNLDHGVLLVGYG 284
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 256 bits (655), Expect = 4e-68
Identities = 135/262 (51%), Positives = 166/262 (63%), Gaps = 1/262 (0%)
Frame = +1
Query: 7 NEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTN 186
N +W +K+T R Y + RR +WE+N++ IQ HN EY GKH +++ +N F DMTN
Sbjct: 26 NAQWHQWKSTHRRLYGTNEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTN 85
Query: 187 EEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSA 366
EEF+ G K +G + P + + P +VDWR+KG VTPVKNQ QCGSCW+FSA
Sbjct: 86 EEFRQIVNGYRHQKHK-KGRLFQEPLMLQI-PKTVDWREKGCVTPVKNQGQCGSCWAFSA 143
Query: 367 TGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYP 543
+G LEGQ F K +LIS SEQ LVDCS LMD AF+YIK+ G++SE YP
Sbjct: 144 SGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYP 203
Query: 544 YTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKSG 723
Y A DG+CK V TGF DI Q E L AVATVGP+SVA+DA H S Q Y SG
Sbjct: 204 YEAKDGSCKYRAEYAVANDTGFVDI-PQQEKALMKAVATVGPISVAMDASHPSLQFYSSG 262
Query: 724 IYNEESCSTTQLDHGVLAVGYG 789
IY E +CS+ LDHGVL VGYG
Sbjct: 263 IYYEPNCSSKDLDHGVLVVGYG 284
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 254 bits (650), Expect = 1e-67
Identities = 136/272 (50%), Positives = 170/272 (62%), Gaps = 9/272 (3%)
Frame = +1
Query: 4 LNEEWETYKTTFGRKY-DELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADM 180
+ EEW TYK + Y +E+ + R I+ +N I KHN + GK +Y LGLN++ADM
Sbjct: 24 IKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADM 83
Query: 181 TNEEFKAKYLG-------IMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQ 339
+ EFK G +M+ + L G+TY+ P ++ V P SVDWR+ G VT VK+Q
Sbjct: 84 LHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTV-PKSVDWREHGAVTGVKDQGH 142
Query: 340 CGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQG 519
CGSCW+FS+TG+LEGQ+FRK L+S SEQ LVDCS LMDNAFRYIKD G
Sbjct: 143 CGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNG 202
Query: 520 -IESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGH 696
I++E YPY D +C N + I TGF DI +E + AVAT+GPVSVAIDA H
Sbjct: 203 GIDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASH 262
Query: 697 ASFQLYKSGIYNEESCSTTQLDHGVLAVGYGT 792
SFQLY G+YNE C LDHGVL VGYGT
Sbjct: 263 ESFQLYSEGVYNEPECDEQNLDHGVLVVGYGT 294
>sp|P61277|CATK_MACMU Cathepsin K precursor
sp|P61276|CATK_MACFA Cathepsin K precursor
Length = 329
Score = 252 bits (644), Expect = 7e-67
Identities = 132/267 (49%), Positives = 168/267 (62%), Gaps = 3/267 (1%)
Frame = +1
Query: 4 LNEEWETYKTTFGRKYDELTD-ITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADM 180
L+ WE +K T ++Y+ D I+RRLIWE+NLKYI HNLE LG HTY L +N DM
Sbjct: 22 LDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDM 81
Query: 181 TNEEFKAKYLGI-MKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWS 357
TNEE K G+ + + T P+ G P SVD+R+KGYVTPVKNQ QCGSCW+
Sbjct: 82 TNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWA 141
Query: 358 FSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYI-KDQGIESEG 534
FS+ G+LEGQ +K +L++ S Q LVDC M NAF+Y+ K++GI+SE
Sbjct: 142 FSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSED 199
Query: 535 DYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLY 714
YPY + +C NP+ KC G+ +I NE L AVA VGPVSVAIDA SFQ Y
Sbjct: 200 AYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 259
Query: 715 KSGIYNEESCSTTQLDHGVLAVGYGTQ 795
G+Y +ESC++ L+H VLAVGYG Q
Sbjct: 260 SKGVYYDESCNSDNLNHAVLAVGYGIQ 286
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.314 0.131 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,766,203
Number of Sequences: 369166
Number of extensions: 1684033
Number of successful extensions: 3813
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3366
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7473924075
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)