Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_L03
(821 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P60842|IF4A1_HUMAN Eukaryotic initiation factor 4A-I (eI... 382 e-106
sp|Q4R8K5|IF4A1_MACFA Eukaryotic initiation factor 4A-I (eI... 382 e-106
sp|P29562|IF4A1_RABIT Eukaryotic initiation factor 4A-I (eI... 382 e-106
sp|P47943|IF4A_SCHPO Eukaryotic initiation factor 4A (eIF4A... 381 e-105
sp|P10630|IF4A2_MOUSE Eukaryotic initiation factor 4A-II (e... 378 e-105
sp|Q02748|IF4A_DROME Eukaryotic initiation factor 4A (eIF4A... 378 e-105
sp|Q5R5F5|IF4A1_PONPY Eukaryotic initiation factor 4A-I (eI... 376 e-104
sp|Q4R4Y9|IF4A2_MACFA Eukaryotic initiation factor 4A-II (e... 375 e-104
sp|P27639|IF4A_CAEEL Eukaryotic initiation factor 4A (eIF4A... 369 e-102
sp|Q40465|IF411_TOBAC Eukaryotic initiation factor 4A-11 (e... 360 3e-99
>sp|P60842|IF4A1_HUMAN Eukaryotic initiation factor 4A-I (eIF4A-I) (eIF-4A-I)
sp|P60843|IF4A1_MOUSE Eukaryotic initiation factor 4A-I (eIF4A-I) (eIF-4A-I)
Length = 406
Score = 382 bits (980), Expect = e-106
Identities = 191/273 (69%), Positives = 230/273 (84%), Gaps = 1/273 (0%)
Frame = +2
Query: 2 IETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGTGK 181
IE+N+ ++ +SFDDMNL E LLRGIYAYGFEKPSAIQQRA+LP I+G+DVIAQAQSGTGK
Sbjct: 23 IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGK 82
Query: 182 TATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRVQE 361
TATF+++ILQ+I++ QALVLAPTRELA+QI KV++ALGDYMGA +ACIGGT V+
Sbjct: 83 TATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRA 142
Query: 362 DVGNLE-NGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQF 538
+V L+ H+IVGTPGRV DM+ R L IKMFVLDEADEMLSRGFK+QI+ + Q
Sbjct: 143 EVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQK 202
Query: 539 IEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFET 718
+ +TQ+VLLSATMP DVLEVT+KFMR P++ILVKKEELTLEGIRQFY+NV E++K +T
Sbjct: 203 LNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDT 262
Query: 719 LTDLYETLTITQAVIFCNTRRKVDYLTESLKAK 817
L DLYETLTITQAVIF NTRRKVD+LTE + A+
Sbjct: 263 LCDLYETLTITQAVIFINTRRKVDWLTEKMHAR 295
>sp|Q4R8K5|IF4A1_MACFA Eukaryotic initiation factor 4A-I (eIF4A-I) (eIF-4A-I)
Length = 406
Score = 382 bits (980), Expect = e-106
Identities = 191/273 (69%), Positives = 230/273 (84%), Gaps = 1/273 (0%)
Frame = +2
Query: 2 IETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGTGK 181
IE+N+ ++ +SFDDMNL E LLRGIYAYGFEKPSAIQQRA+LP I+G+DVIAQAQSGTGK
Sbjct: 23 IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGK 82
Query: 182 TATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRVQE 361
TATF+++ILQ+I++ QALVLAPTRELA+QI KV++ALGDYMGA +ACIGGT V+
Sbjct: 83 TATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRA 142
Query: 362 DVGNLE-NGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQF 538
+V L+ H+IVGTPGRV DM+ R L IKMFVLDEADEMLSRGFK+QI+ + Q
Sbjct: 143 EVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQK 202
Query: 539 IEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFET 718
+ +TQ+VLLSATMP DVLEVT+KFMR P++ILVKKEELTLEGIRQFY+NV E++K +T
Sbjct: 203 LNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDT 262
Query: 719 LTDLYETLTITQAVIFCNTRRKVDYLTESLKAK 817
L DLYETLTITQAVIF NTRRKVD+LTE + A+
Sbjct: 263 LCDLYETLTITQAVIFINTRRKVDWLTEKMHAR 295
>sp|P29562|IF4A1_RABIT Eukaryotic initiation factor 4A-I (eIF4A-I) (eIF-4A-I)
Length = 398
Score = 382 bits (980), Expect = e-106
Identities = 191/273 (69%), Positives = 230/273 (84%), Gaps = 1/273 (0%)
Frame = +2
Query: 2 IETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGTGK 181
IE+N+ ++ +SFDDMNL E LLRGIYAYGFEKPSAIQQRA+LP I+G+DVIAQAQSGTGK
Sbjct: 15 IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGK 74
Query: 182 TATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRVQE 361
TATF+++ILQ+I++ QALVLAPTRELA+QI KV++ALGDYMGA +ACIGGT V+
Sbjct: 75 TATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRA 134
Query: 362 DVGNLE-NGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQF 538
+V L+ H+IVGTPGRV DM+ R L IKMFVLDEADEMLSRGFK+QI+ + Q
Sbjct: 135 EVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQK 194
Query: 539 IEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFET 718
+ +TQ+VLLSATMP DVLEVT+KFMR P++ILVKKEELTLEGIRQFY+NV E++K +T
Sbjct: 195 LNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDT 254
Query: 719 LTDLYETLTITQAVIFCNTRRKVDYLTESLKAK 817
L DLYETLTITQAVIF NTRRKVD+LTE + A+
Sbjct: 255 LCDLYETLTITQAVIFINTRRKVDWLTEKMHAR 287
>sp|P47943|IF4A_SCHPO Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 392
Score = 381 bits (978), Expect = e-105
Identities = 183/269 (68%), Positives = 232/269 (86%)
Frame = +2
Query: 2 IETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGTGK 181
IETNY++V ++FDDMNLK +LLRGIYAYGFE+PSAIQQRA++P + DV+AQAQSGTGK
Sbjct: 10 IETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGK 69
Query: 182 TATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRVQE 361
TATFS+++LQ+ID + + QAL+LAPTRELA+QI KV++ALGD M + +ACIGGT V++
Sbjct: 70 TATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRD 129
Query: 362 DVGNLENGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQFI 541
D+ L+ GVHV+VGTPGRV+DMI+R L T++++MFVLDEADEMLSRGFK+QI+ + Q +
Sbjct: 130 DMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLL 189
Query: 542 EHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFETL 721
Q+VLLSATMP DVLEVT KFMR P++ILVKK+ELTLEGI+QFYV V +E++K +TL
Sbjct: 190 PPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTL 249
Query: 722 TDLYETLTITQAVIFCNTRRKVDYLTESL 808
DLYET+T+TQAVIFCNTRRKVD+LTE L
Sbjct: 250 CDLYETVTVTQAVIFCNTRRKVDWLTEQL 278
>sp|P10630|IF4A2_MOUSE Eukaryotic initiation factor 4A-II (eIF4A-II) (eIF-4A-II)
sp|Q14240|IF4A2_HUMAN Eukaryotic initiation factor 4A-II (eIF4A-II) (eIF-4A-II)
sp|Q5R4X1|IF4A2_PONPY Eukaryotic initiation factor 4A-II (eIF4A-II) (eIF-4A-II)
Length = 407
Score = 378 bits (971), Expect = e-105
Identities = 187/273 (68%), Positives = 230/273 (84%), Gaps = 1/273 (0%)
Frame = +2
Query: 2 IETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGTGK 181
IE+N+ ++ ++FDDMNLKE LLRGIYAYGFEKPSAIQQRA++P I+G+DVIAQAQSGTGK
Sbjct: 24 IESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGK 83
Query: 182 TATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRVQE 361
TATF+++ILQ++++ E QALVLAPTRELA+QI KVI+ALGDYMGA +ACIGGT V+
Sbjct: 84 TATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRN 143
Query: 362 DVGNLE-NGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQF 538
++ L+ H++VGTPGRV DM+ R L IKMFVLDEADEMLSRGFK+QI+ + Q
Sbjct: 144 EMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQK 203
Query: 539 IEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFET 718
+ Q+VLLSATMP DVLEVT+KFMR P++ILVKKEELTLEGI+QFY+NV E++K +T
Sbjct: 204 LNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDT 263
Query: 719 LTDLYETLTITQAVIFCNTRRKVDYLTESLKAK 817
L DLYETLTITQAVIF NTRRKVD+LTE + A+
Sbjct: 264 LCDLYETLTITQAVIFLNTRRKVDWLTEKMHAR 296
>sp|Q02748|IF4A_DROME Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 403
Score = 378 bits (971), Expect = e-105
Identities = 187/269 (69%), Positives = 226/269 (84%)
Frame = +2
Query: 2 IETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGTGK 181
IE+ + +V ++FDDMNL+E+LLRGIY YGFEKPSAIQQRA++P + G DVIAQAQSGTGK
Sbjct: 21 IESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGK 80
Query: 182 TATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRVQE 361
TATFS+AILQ+ID + E QAL+LAPTRELA QI +V++ALG+YM S+ACIGGT V+E
Sbjct: 81 TATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVRE 140
Query: 362 DVGNLENGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQFI 541
D LE+G HV+VGTPGRV DMI R L+T IK+FVLDEADEMLSRGFK+QI V + +
Sbjct: 141 DARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKML 200
Query: 542 EHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFETL 721
D Q++LLSATMPPDVLEV+R FMR PV ILVKKEELTLEGI+QFYVNV +E++K TL
Sbjct: 201 PPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTL 260
Query: 722 TDLYETLTITQAVIFCNTRRKVDYLTESL 808
DLY+TL+ITQ+VIFCNTRRKVD LT+ +
Sbjct: 261 CDLYDTLSITQSVIFCNTRRKVDQLTQEM 289
>sp|Q5R5F5|IF4A1_PONPY Eukaryotic initiation factor 4A-I (eIF4A-I) (eIF-4A-I)
Length = 406
Score = 376 bits (966), Expect = e-104
Identities = 189/273 (69%), Positives = 228/273 (83%), Gaps = 1/273 (0%)
Frame = +2
Query: 2 IETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGTGK 181
IE+N+ ++ +S DDMNL E LLRGIYAYGFEKPSAIQQRA+L I+G+DVIAQAQSGTGK
Sbjct: 23 IESNWNEIVDSLDDMNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQAQSGTGK 82
Query: 182 TATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRVQE 361
TATF+++ILQ+I++ QALVLAPTRELA+QI KV++ALGDYMGA +ACIGGT V+
Sbjct: 83 TATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRA 142
Query: 362 DVGNLE-NGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQF 538
+V L+ H+IVGTPGRV DM+ R L IKMFVLDEADEMLSRGFK+QI+ + Q
Sbjct: 143 EVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQK 202
Query: 539 IEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFET 718
+ +TQ+VLLSATMP DVLEVT+KFMR P++ILVKKEELTLEGIRQFY+NV E++K +T
Sbjct: 203 LNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDT 262
Query: 719 LTDLYETLTITQAVIFCNTRRKVDYLTESLKAK 817
L DLYETLTITQAVIF NTRRKVD+LTE + A+
Sbjct: 263 LCDLYETLTITQAVIFINTRRKVDWLTEKMHAR 295
>sp|Q4R4Y9|IF4A2_MACFA Eukaryotic initiation factor 4A-II (eIF4A-II) (eIF-4A-II)
Length = 408
Score = 375 bits (964), Expect = e-104
Identities = 186/273 (68%), Positives = 229/273 (83%), Gaps = 1/273 (0%)
Frame = +2
Query: 2 IETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGTGK 181
IE+N+ ++ ++FDDMNLKE LLRGIYAYGFEKPSAIQQRA++P I+G+DVIAQAQSGTGK
Sbjct: 25 IESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGK 84
Query: 182 TATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRVQE 361
TATF+++ILQ++++ E QALVLAPTRELA+QI KVI+ALGDYMGA +ACIGGT V+
Sbjct: 85 TATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRN 144
Query: 362 DVGNLE-NGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQF 538
++ L+ H++VGTPGRV DM+ R L IKMFVLDEAD MLSRGFK+QI+ + Q
Sbjct: 145 EMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADGMLSRGFKDQIYEIFQK 204
Query: 539 IEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFET 718
+ Q+VLLSATMP DVLEVT+KFMR P++ILVKKEELTLEGI+QFY+NV E++K +T
Sbjct: 205 LNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDT 264
Query: 719 LTDLYETLTITQAVIFCNTRRKVDYLTESLKAK 817
L DLYETLTITQAVIF NTRRKVD+LTE + A+
Sbjct: 265 LCDLYETLTITQAVIFLNTRRKVDWLTEKMHAR 297
>sp|P27639|IF4A_CAEEL Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 402
Score = 369 bits (947), Expect = e-102
Identities = 183/273 (67%), Positives = 222/273 (81%)
Frame = +2
Query: 2 IETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGTGK 181
IE NY++V ESFDDM LKE+LLRGIY +GFEKPSAIQ+RA++P G DVIAQAQSGTGK
Sbjct: 20 IEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
Query: 182 TATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRVQE 361
TATFSV+ILQRID VQALV+APTRELA+QI KV+ ALG+Y+ CIGGT V++
Sbjct: 80 TATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRD 139
Query: 362 DVGNLENGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQFI 541
D LE G+HV+VGTPGRV DMI R L T+ IKMFVLDEADEMLSRGFK+QI+ V + +
Sbjct: 140 DQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSM 199
Query: 542 EHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFETL 721
D Q+VLLSATMP +VL+VT +FMR+P++ILVKK+ELTLEGIRQFY+NV ++++KF+ L
Sbjct: 200 PQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCL 259
Query: 722 TDLYETLTITQAVIFCNTRRKVDYLTESLKAKQ 820
DLY + +TQAVIFCNTRRKVD LTE + Q
Sbjct: 260 CDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQ 292
>sp|Q40465|IF411_TOBAC Eukaryotic initiation factor 4A-11 (eIF4A-11) (eIF-4A-11)
Length = 413
Score = 360 bits (924), Expect = 3e-99
Identities = 178/270 (65%), Positives = 224/270 (82%)
Frame = +2
Query: 8 TNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGTGKTA 187
T+Y++V ESFD M L+E+LLRGIYAYGFEKPSAIQQR ++P +G DVI QAQSGTGKTA
Sbjct: 33 TSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 92
Query: 188 TFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRVQEDV 367
TF ILQ++D + E QALVLAPTRELA+QI KV+ ALGDY+G K +AC+GGT V+ED
Sbjct: 93 TFCSGILQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 152
Query: 368 GNLENGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQFIEH 547
L++GVHV+VGTPGRV DM+ R +L+ ++IKMFVLDEADEMLSRGFK+QI+ + Q +
Sbjct: 153 RILQSGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPP 212
Query: 548 DTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFETLTD 727
Q+ + SATMPP+ LE+TRKFM PV+ILVK++ELTLEGI+QFYVNV +E++K ETL D
Sbjct: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCD 272
Query: 728 LYETLTITQAVIFCNTRRKVDYLTESLKAK 817
LYETL ITQ+VIF NTRRKVD+LT+ ++ +
Sbjct: 273 LYETLAITQSVIFVNTRRKVDWLTDKMRGR 302
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,021,388
Number of Sequences: 369166
Number of extensions: 1810141
Number of successful extensions: 5156
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4794
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7907893860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)