Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_L02
(897 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 261 2e-69
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 259 7e-69
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 253 4e-67
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 252 1e-66
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 251 1e-66
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 248 1e-65
sp|P13277|CYSP1_HOMAM Digestive cysteine proteinase 1 precu... 246 5e-65
sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein) 245 1e-64
sp|P55097|CATK_MOUSE Cathepsin K precursor 244 2e-64
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 244 2e-64
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 261 bits (666), Expect = 2e-69
Identities = 135/302 (44%), Positives = 181/302 (59%), Gaps = 8/302 (2%)
Frame = +2
Query: 2 LSNGAYKIDLQLNDQWRIYKETFNKTYRNPFHEIERREIWEDNLKYIEKHNYEYFVGLHS 181
+++ D L QW +K N+ Y E RR +WE N+K IE HN EY G HS
Sbjct: 14 IASATLTFDHSLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHS 72
Query: 182 FTLGANEFSDLSHEEFKSIYLMKEFIPPKTENIYXXXXXXXXXXXXVNWQKQGYVTSVKD 361
FT+ N F D++ EEF+ + + P+ ++ V+W+++GYVT VK+
Sbjct: 73 FTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRS-VDWREKGYVTPVKN 131
Query: 362 QTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSEQQLVDCD--MKSYGCYGGWVEDAVDYI 535
Q + CGSCWAFS TG+LEGQ +RK RL+SLSEQ LVDC + GC GG ++ A Y+
Sbjct: 132 QGQ-CGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYV 190
Query: 536 TQTGGIESEDDYPYLAKASLCKFNKSKIVARTAGYTTIEKNEIALAEALVNVGPISIIID 715
GG++SE+ YPY A CK+N VA G+ I K E AL +A+ VGPIS+ ID
Sbjct: 191 QDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAID 250
Query: 716 ASHRSFQLYKDGIYDEPQC-TEKVDHAVLLVGYG-----EEKSKYWIVKNSWGRKWGKNG 877
A H SF YK+GIY EP C +E +DH VL+VGYG + +KYW+VKNSWG +WG G
Sbjct: 251 AGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGG 310
Query: 878 YI 883
Y+
Sbjct: 311 YV 312
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 259 bits (662), Expect = 7e-69
Identities = 137/306 (44%), Positives = 186/306 (60%), Gaps = 12/306 (3%)
Frame = +2
Query: 2 LSNGAYKIDLQLNDQWRIYKETFNKTYRNPFHEIERREIWEDNLKYIEKHNYEYFVGLHS 181
+++ K D L+ +W +K T + Y E RR +WE N+K IE HN EY G H
Sbjct: 14 IASAVPKFDQNLDTKWYQWKATHRRLY-GANEEGWRRAVWEKNMKMIELHNGEYSQGKHG 72
Query: 182 FTLGANEFSDLSHEEFKSI---YLMKEFIPPKTENIYXXXXXXXXXXXXVNWQKQGYVTS 352
FT+ N F D+++EEF+ + + ++F K V+W+K+GYVT
Sbjct: 73 FTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKV----FREPLFLDLPKSVDWRKKGYVTP 128
Query: 353 VKDQTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSEQQLVDCD--MKSYGCYGGWVEDAV 526
VK+Q + CGSCWAFS TG+LEGQ +RK +LVSLSEQ LVDC + GC GG++ A
Sbjct: 129 VKNQ-KQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAF 187
Query: 527 DYITQTGGIESEDDYPYLAKASLCKFNKSKIVARTAGYTTIEK-NEIALAEALVNVGPIS 703
Y+ + GG++SE+ YPY+A +CK+ VA G+T + E AL +A+ VGPIS
Sbjct: 188 QYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPIS 247
Query: 704 IIIDASHRSFQLYKDGIYDEPQCTEK-VDHAVLLVGYGEE-----KSKYWIVKNSWGRKW 865
+ +DA H SFQ YK GIY EP C+ K +DH VL+VGYG E SKYW+VKNSWG +W
Sbjct: 248 VAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEW 307
Query: 866 GKNGYI 883
G NGY+
Sbjct: 308 GSNGYV 313
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 253 bits (647), Expect = 4e-67
Identities = 134/303 (44%), Positives = 184/303 (60%), Gaps = 9/303 (2%)
Frame = +2
Query: 2 LSNGAYKIDLQLNDQWRIYKETFNKTYRNPFHEIERREIWEDNLKYIEKHNYEYFVGLHS 181
+++ A K D LN QW +K T + Y E RR +WE N+K IE HN EY G H
Sbjct: 14 IASAAPKFDQSLNAQWYQWKATHRRLY-GMNEEGWRRAVWEKNMKMIELHNREYSQGKHG 72
Query: 182 FTLGANEFSDLSHEEFKSIYLMKEFIPPK-TENIYXXXXXXXXXXXXVNWQKQGYVTSVK 358
FT+ N F D+++EEF+ + M F K + V+W+++GYVT VK
Sbjct: 73 FTMAMNAFGDMTNEEFRQV--MNGFQNQKHKKGKMFQEPLFAEIPKSVDWREKGYVTPVK 130
Query: 359 DQTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSEQQLVDCD--MKSYGCYGGWVEDAVDY 532
+Q + CGSCWAFS TG+LEGQ +RK +LVSLSEQ LVDC + GC GG +++A Y
Sbjct: 131 NQGQ-CGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRY 189
Query: 533 ITQTGGIESEDDYPYLAK-ASLCKFNKSKIVARTAGYTTIEKNEIALAEALVNVGPISII 709
+ GG++SE+ YPYL + C + A G+ + + E AL +A+ +GPIS+
Sbjct: 190 VKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQREKALMKAVATLGPISVA 249
Query: 710 IDASHRSFQLYKDGIYDEPQCTEK-VDHAVLLVGYG----EEKSKYWIVKNSWGRKWGKN 874
IDA H+SFQ YK GIY +P C+ K +DH VL+VGYG + +K+WIVKNSWG +WG N
Sbjct: 250 IDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWN 309
Query: 875 GYI 883
GY+
Sbjct: 310 GYV 312
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 252 bits (643), Expect = 1e-66
Identities = 132/303 (43%), Positives = 185/303 (61%), Gaps = 9/303 (2%)
Frame = +2
Query: 2 LSNGAYKIDLQLNDQWRIYKETFNKTYRNPFHEIERREIWEDNLKYIEKHNYEYFVGLHS 181
+++ A K+D L+ W +K T + Y E RR +WE N+K IE HN EY G H
Sbjct: 14 IASAAPKLDQNLDADWYKWKATHGRLY-GMNEEGWRRAVWEKNMKMIELHNQEYSQGKHG 72
Query: 182 FTLGANEFSDLSHEEFKSIYLMKEFIPPKTENIYXXXXXXXXXXXXVNWQKQGYVTSVKD 361
F++ N F D+++EEF+ + + K ++ V+W+++GYVT+VK+
Sbjct: 73 FSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHESLVLEVPKS-VDWREKGYVTAVKN 131
Query: 362 QTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSEQQLVDCD--MKSYGCYGGWVEDAVDYI 535
Q + CGSCWAFS TG+LEGQ +RK +LVSLSEQ LVDC + GC GG +++A Y+
Sbjct: 132 QGQ-CGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYV 190
Query: 536 TQTGGIESEDDYPYLAK-ASLCKFNKSKIVARTAGYTTIEKNEIALAEALVNVGPISIII 712
GG+++E+ YPYL + + C + A G+ I + E AL +A+ VGPIS+ I
Sbjct: 191 KDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAI 250
Query: 713 DASHRSFQLYKDGIYDEPQCTEK-VDHAVLLVGYGEE-----KSKYWIVKNSWGRKWGKN 874
DA H SFQ YK GIY +P C+ K +DH VL+VGYG E SK+WIVKNSWG +WG N
Sbjct: 251 DAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWN 310
Query: 875 GYI 883
GY+
Sbjct: 311 GYV 313
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 251 bits (642), Expect = 1e-66
Identities = 133/296 (44%), Positives = 177/296 (59%), Gaps = 8/296 (2%)
Frame = +2
Query: 20 KIDLQLNDQWRIYKETFNKTYRNPFHEIERREIWEDNLKYIEKHNYEYFVGLHSFTLGAN 199
K D N QW +K T + Y E RR +WE N++ I+ HN EY G H FT+ N
Sbjct: 20 KFDQTFNAQWHQWKSTHRRLYGTNEEEW-RRAVWEKNMRMIQLHNGEYSNGKHGFTMEMN 78
Query: 200 EFSDLSHEEFKSIYLMKEFIPPKTENIYXXXXXXXXXXXXVNWQKQGYVTSVKDQTRTCG 379
F D+++EEF+ I K ++ V+W+++G VT VK+Q + CG
Sbjct: 79 AFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLMLQIPKT-VDWREKGCVTPVKNQGQ-CG 136
Query: 380 SCWAFSTTGSLEGQFYRKYKRLVSLSEQQLVDC--DMKSYGCYGGWVEDAVDYITQTGGI 553
SCWAFS +G LEGQ + K +L+SLSEQ LVDC D + GC GG ++ A YI + GG+
Sbjct: 137 SCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGL 196
Query: 554 ESEDDYPYLAKASLCKFNKSKIVARTAGYTTIEKNEIALAEALVNVGPISIIIDASHRSF 733
+SE+ YPY AK CK+ VA G+ I + E AL +A+ VGPIS+ +DASH S
Sbjct: 197 DSEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSL 256
Query: 734 QLYKDGIYDEPQCTEK-VDHAVLLVGYGEE-----KSKYWIVKNSWGRKWGKNGYI 883
Q Y GIY EP C+ K +DH VL+VGYG E K KYW+VKNSWG++WG +GYI
Sbjct: 257 QFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYI 312
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 248 bits (634), Expect = 1e-65
Identities = 134/303 (44%), Positives = 182/303 (60%), Gaps = 9/303 (2%)
Frame = +2
Query: 2 LSNGAYKIDLQLNDQWRIYKETFNKTYRNPFHEIERREIWEDNLKYIEKHNYEYFVGLHS 181
+++ A K+D L+ W +K T + Y E RR +WE N K I+ HN EY G H+
Sbjct: 14 VASAAPKLDPNLDAHWHQWKATHRRLY-GMNEEEWRRAVWEKNKKIIDLHNQEYSEGKHA 72
Query: 182 FTLGANEFSDLSHEEFKSIYLMKEFIPPKTENIYXXXXXXXXXXXXVNWQKQGYVTSVKD 361
F + N F D+++EEF+ + + K ++ V+W K+GYVT VK+
Sbjct: 73 FRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLVDVPKS-VDWTKKGYVTPVKN 131
Query: 362 QTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSEQQLVDCD--MKSYGCYGGWVEDAVDYI 535
Q + CGSCWAFS TG+LEGQ +RK +LVSLSEQ LVDC + GC GG +++A YI
Sbjct: 132 QGQ-CGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYI 190
Query: 536 TQTGGIESEDDYPYLA-KASLCKFNKSKIVARTAGYTTIEKNEIALAEALVNVGPISIII 712
GG++SE+ YPYLA + C + A G+ I + E AL +A+ VGPIS+ I
Sbjct: 191 KDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAI 250
Query: 713 DASHRSFQLYKDGIYDEPQCTEK-VDHAVLLVGYGEE-----KSKYWIVKNSWGRKWGKN 874
DA H SFQ YK GIY +P C+ K +DH VL+VGYG E +K+WIVKNSWG +WG N
Sbjct: 251 DAGHTSFQFYKSGIYYDPDCSCKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWN 310
Query: 875 GYI 883
GY+
Sbjct: 311 GYV 313
>sp|P13277|CYSP1_HOMAM Digestive cysteine proteinase 1 precursor
Length = 322
Score = 246 bits (629), Expect = 5e-65
Identities = 132/288 (45%), Positives = 179/288 (62%), Gaps = 6/288 (2%)
Frame = +2
Query: 38 NDQWRIYKETFNKTYRNPFHEIERREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDLS 217
N W +K F + Y + E R ++ DNL+YIE+ N +Y G ++ L N+FSD++
Sbjct: 17 NPSWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMT 76
Query: 218 HEEFKSIYLMKEFIPPKTENIYXXXXXXXXXXXXVNWQKQGYVTSVKDQTRTCGSCWAFS 397
+E+F ++ MK + V+W+ +G VT VKDQ + CGSCWAFS
Sbjct: 77 NEKFNAV--MKGYKKGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQ-CGSCWAFS 133
Query: 398 TTGSLEGQFYRKYKRLVSLSEQQLVDCDMKSY---GCYGGWVEDAVDYITQTGGIESEDD 568
TTG +EGQ + K RLVSLSEQQLVDC SY GC GGWVE A+ Y+ GG+++E
Sbjct: 134 TTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESS 193
Query: 569 YPYLAKASLCKFNKSKIVARTAGYTTI-EKNEIALAEALVNVGPISIIIDASHRSFQLYK 745
YPY A+ + C+FN + I A GY I + +E AL A ++GPIS+ IDASHRSFQ Y
Sbjct: 194 YPYEARDNTCRFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYY 253
Query: 746 DGIYDEPQC-TEKVDHAVLLVGYGEEKSK-YWIVKNSWGRKWGKNGYI 883
G+Y EP C + ++DHAVL VGYG E + +W+VKNSW WG++GYI
Sbjct: 254 TGVYYEPSCSSSQLDHAVLAVGYGSEGGQDFWLVKNSWATSWGESGYI 301
>sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein)
Length = 329
Score = 245 bits (625), Expect = 1e-64
Identities = 126/290 (43%), Positives = 184/290 (63%), Gaps = 7/290 (2%)
Frame = +2
Query: 35 LNDQWRIYKETFNKTYRNPFHEIERREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDL 214
L+ QW ++K+T++K Y + EI RR IWE NLK+I HN E +G+H++ L N D+
Sbjct: 22 LDTQWELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDM 81
Query: 215 SHEEF-KSIYLMKEFIPPK---TENIYXXXXXXXXXXXXVNWQKQGYVTSVKDQTRTCGS 382
+ EE + + +K +PP + + ++++K+GYVT VK+Q + CGS
Sbjct: 82 TSEEVVQKMTGLK--VPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQ-CGS 138
Query: 383 CWAFSTTGSLEGQFYRKYKRLVSLSEQQLVDCDMKSYGCYGGWVEDAVDYITQTGGIESE 562
CWAFS+ G+LEGQ +K +L++LS Q LVDC ++YGC GG++ +A Y+ + GI+SE
Sbjct: 139 CWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENYGCGGGYMTNAFQYVQRNRGIDSE 198
Query: 563 DDYPYLAKASLCKFNKSKIVARTAGYTTI-EKNEIALAEALVNVGPISIIIDASHRSFQL 739
D YPY+ + C +N + A+ GY I E NE AL A+ VGP+S+ IDAS SFQ
Sbjct: 199 DAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQF 258
Query: 740 YKDGIYDEPQC-TEKVDHAVLLVGYGEEK-SKYWIVKNSWGRKWGKNGYI 883
Y G+Y + C ++ V+HAVL VGYG +K +K+WI+KNSWG WG GYI
Sbjct: 259 YSKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWGNKGYI 308
>sp|P55097|CATK_MOUSE Cathepsin K precursor
Length = 329
Score = 244 bits (624), Expect = 2e-64
Identities = 128/288 (44%), Positives = 176/288 (61%), Gaps = 6/288 (2%)
Frame = +2
Query: 35 LNDQWRIYKETFNKTYRNPFHEIERREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDL 214
L+ QW ++K+T K Y + EI RR IWE NLK I HN E +G+H++ L N D+
Sbjct: 22 LDTQWELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDM 81
Query: 215 SHEEFKSIYLMKEFIPPK---TENIYXXXXXXXXXXXXVNWQKQGYVTSVKDQTRTCGSC 385
+ EE + IPP + + ++++K+GYVT VK+Q + CGSC
Sbjct: 82 TSEEVVQ-KMTGLRIPPSRSYSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQ-CGSC 139
Query: 386 WAFSTTGSLEGQFYRKYKRLVSLSEQQLVDCDMKSYGCYGGWVEDAVDYITQTGGIESED 565
WAFS+ G+LEGQ +K +L++LS Q LVDC ++YGC GG++ A Y+ Q GGI+SED
Sbjct: 140 WAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTENYGCGGGYMTTAFQYVQQNGGIDSED 199
Query: 566 DYPYLAKASLCKFNKSKIVARTAGYTTIE-KNEIALAEALVNVGPISIIIDASHRSFQLY 742
YPY+ + C +N + A+ GY I NE AL A+ VGPIS+ IDAS SFQ Y
Sbjct: 200 AYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFY 259
Query: 743 KDGIYDEPQC-TEKVDHAVLLVGYGEEK-SKYWIVKNSWGRKWGKNGY 880
G+Y + C + V+HAVL+VGYG +K SK+WI+KNSWG WG GY
Sbjct: 260 SRGVYYDENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGY 307
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 244 bits (623), Expect = 2e-64
Identities = 130/296 (43%), Positives = 175/296 (59%), Gaps = 8/296 (2%)
Frame = +2
Query: 20 KIDLQLNDQWRIYKETFNKTYRNPFHEIERREIWEDNLKYIEKHNYEYFVGLHSFTLGAN 199
K D + +W +K T + Y E RR IWE N++ I+ HN EY G H F++ N
Sbjct: 20 KFDQTFSAEWHQWKSTHRRLYGTNEEEW-RRAIWEKNMRMIQLHNGEYSNGQHGFSMEMN 78
Query: 200 EFSDLSHEEFKSIYLMKEFIPPKTENIYXXXXXXXXXXXXVNWQKQGYVTSVKDQTRTCG 379
F D+++EEF+ + K ++ V+W+++G VT VK+Q + CG
Sbjct: 79 AFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLKIPKS-VDWREKGCVTPVKNQGQ-CG 136
Query: 380 SCWAFSTTGSLEGQFYRKYKRLVSLSEQQLVDCD--MKSYGCYGGWVEDAVDYITQTGGI 553
SCWAFS +G LEGQ + K +L+SLSEQ LVDC + GC GG ++ A YI + GG+
Sbjct: 137 SCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGL 196
Query: 554 ESEDDYPYLAKASLCKFNKSKIVARTAGYTTIEKNEIALAEALVNVGPISIIIDASHRSF 733
+SE+ YPY AK CK+ VA G+ I + E AL +A+ VGPIS+ +DASH S
Sbjct: 197 DSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSL 256
Query: 734 QLYKDGIYDEPQCTEK-VDHAVLLVGYGEE-----KSKYWIVKNSWGRKWGKNGYI 883
Q Y GIY EP C+ K +DH VLLVGYG E K+KYW+VKNSWG +WG GYI
Sbjct: 257 QFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYI 312
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,780,261
Number of Sequences: 369166
Number of extensions: 1929042
Number of successful extensions: 5601
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4910
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9030416440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)