Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_K08
(920 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenas... 439 e-123
sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenas... 438 e-122
sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase ... 437 e-122
sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenas... 434 e-121
sp|P51469|G3P_XENLA Glyceraldehyde-3-phosphate dehydrogenas... 434 e-121
sp|P10096|G3P_BOVIN Glyceraldehyde-3-phosphate dehydrogenas... 432 e-121
sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenas... 432 e-121
sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenas... 432 e-121
sp|P00354|G3P1_HUMAN Glyceraldehyde-3-phosphate dehydrogena... 431 e-120
sp|O57479|G3P_COLLI Glyceraldehyde-3-phosphate dehydrogenas... 429 e-120
>sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 439 bits (1129), Expect = e-123
Identities = 217/306 (70%), Positives = 251/306 (82%)
Frame = +3
Query: 3 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 182
VG+NGFGRIGRLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENG 63
Query: 183 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 362
KLV++G ++S++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 363 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 542
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 182
Query: 543 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVD 722
QKTVDGPS K+WRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVD
Sbjct: 183 QKTVDGPSGKMWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 723 LTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLT 902
LTC+L+KAAKYD+IK +K ASE +KGIL YTE++VVS DF D +SS FDA AGI L
Sbjct: 243 LTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALN 302
Query: 903 DTFVKL 920
D FVKL
Sbjct: 303 DHFVKL 308
>sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 438 bits (1126), Expect = e-122
Identities = 217/306 (70%), Positives = 250/306 (81%)
Frame = +3
Query: 3 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 182
VG+NGFGRIGRLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENG 63
Query: 183 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 362
KLV++G ++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGKPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 363 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 542
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 182
Query: 543 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVD 722
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVD
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 723 LTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLT 902
LTC+L+KAAKYD+IK +K ASE +KGIL YTE++VVS DF D +SS FDA AGI L
Sbjct: 243 LTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALN 302
Query: 903 DTFVKL 920
D FVKL
Sbjct: 303 DHFVKL 308
>sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 437 bits (1124), Expect = e-122
Identities = 217/306 (70%), Positives = 249/306 (81%)
Frame = +3
Query: 3 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 182
VG+NGFGRIGRLV RAA G VD+VA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENG 63
Query: 183 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 362
KLV++G A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGKAITIFQERDPANIKWGDAGATYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 363 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 542
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 182
Query: 543 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVD 722
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVD
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 723 LTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLT 902
LTC+L+K AKYD+IK +K ASE +KGIL YTE++VVS DF D +SS FDA AGI L
Sbjct: 243 LTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALN 302
Query: 903 DTFVKL 920
D FVKL
Sbjct: 303 DHFVKL 308
>sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 434 bits (1117), Expect = e-121
Identities = 217/306 (70%), Positives = 248/306 (81%)
Frame = +3
Query: 3 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 182
VG+NGFGRIGRLV RAA G VDVVA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENG 63
Query: 183 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 362
KLV++G A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 363 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 542
S DAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TAT
Sbjct: 123 SXDAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 182
Query: 543 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVD 722
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVD
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 723 LTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLT 902
LTC+L+KAAKYD+IK +K ASE +KGIL YTE++VVS DF +SS FDA AGI L
Sbjct: 243 LTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIALN 302
Query: 903 DTFVKL 920
D FVKL
Sbjct: 303 DHFVKL 308
>sp|P51469|G3P_XENLA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 434 bits (1115), Expect = e-121
Identities = 217/306 (70%), Positives = 249/306 (81%)
Frame = +3
Query: 3 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 182
VGINGFG IGRLV RAA + G V VVA+NDPFI+LDYMVYMFKYDSTHG+F G V+A++G
Sbjct: 4 VGINGFGCIGRLVTRAAFDSGKVQVVAINDPFIDLDYMVYMFKYDSTHGRFKGTVKAENG 63
Query: 183 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 362
KL+++ ++V+ +R+P I W YVVESTGVFTT EKAS H K AK+VVISAP
Sbjct: 64 KLIINDQVITVFQERDPSSIKWGDAGAVYVVESTGVFTTTEKASLHLKGG-AKRVVISAP 122
Query: 363 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 542
SADAPMFV+GVNHEKY+ SL +VSNASCTTNCLAPLAKV+ND+FGI EGLMTT+HA+TAT
Sbjct: 123 SADAPMFVVGVNHEKYENSLKVVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHAFTAT 182
Query: 543 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVD 722
QKTVDGPS KLWRDGRGA QNIIP IPELNGKITGMAFRVP P+VSVVD
Sbjct: 183 QKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKITGMAFRVPTPNVSVVD 242
Query: 723 LTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLT 902
LTC+L+K AKYD+IKAAIK ASE MKGIL YT+++VVS DF GD +SSIFDA AGI L
Sbjct: 243 LTCRLQKPAKYDDIKAAIKTASEGPMKGILGYTQDQVVSTDFNGDTHSSIFDADAGIALN 302
Query: 903 DTFVKL 920
+ FVKL
Sbjct: 303 ENFVKL 308
>sp|P10096|G3P_BOVIN Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 320
Score = 432 bits (1112), Expect = e-121
Identities = 215/306 (70%), Positives = 249/306 (81%)
Frame = +3
Query: 3 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 182
VG+NGFGRIGRLV RAA G VD+VA+NDPFI+L YMVYMF+YDSTHGKF+G V+A++G
Sbjct: 3 VGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFNGTVKAENG 62
Query: 183 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 362
KLV++G A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 63 KLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 121
Query: 363 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 542
SADAPMFVMGVNHEKY+ +L IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TAT
Sbjct: 122 SADAPMFVMGVNHEKYNNTLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 181
Query: 543 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVD 722
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVD
Sbjct: 182 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 241
Query: 723 LTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLT 902
LTC+L+K AKYDEIK +K ASE +KGIL YTE++VVS DF D +SS FDA AGI L
Sbjct: 242 LTCRLEKPAKYDEIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALN 301
Query: 903 DTFVKL 920
D FVKL
Sbjct: 302 DHFVKL 307
>sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 432 bits (1111), Expect = e-121
Identities = 215/306 (70%), Positives = 250/306 (81%)
Frame = +3
Query: 3 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 182
VG+NGFGRIGRLV RAA+ G V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKAENG 63
Query: 183 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 362
KLV++GHA++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGHAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 363 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 542
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITAT 182
Query: 543 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVD 722
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVD
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 723 LTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLT 902
LTC+L+K AKYD+IK +K A++ +KGIL YTE++VVS DF GD +SS FDA AGI L
Sbjct: 243 LTCRLEKPAKYDDIKRVVKAAADGPLKGILGYTEDQVVSCDFNGDSHSSTFDAGAGIALN 302
Query: 903 DTFVKL 920
D FVKL
Sbjct: 303 DHFVKL 308
>sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 432 bits (1110), Expect = e-121
Identities = 215/306 (70%), Positives = 250/306 (81%)
Frame = +3
Query: 3 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 182
VG+NGFGRIGRLV RAA+ G V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKAENG 63
Query: 183 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 362
KLV++G+A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGNAITIFQERDPSNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 363 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 542
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITAT 182
Query: 543 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVD 722
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVD
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 723 LTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLT 902
LTC+L+K AKYD+IK +K A+E +KGIL YTE++VVS DF GD +SS FDA AGI L
Sbjct: 243 LTCRLEKPAKYDDIKRVVKAAAEGPLKGILGYTEDQVVSCDFNGDSHSSTFDAGAGIALN 302
Query: 903 DTFVKL 920
D FVKL
Sbjct: 303 DNFVKL 308
>sp|P00354|G3P1_HUMAN Glyceraldehyde-3-phosphate dehydrogenase, muscle (GAPDH)
Length = 334
Score = 431 bits (1108), Expect = e-120
Identities = 212/306 (69%), Positives = 249/306 (81%)
Frame = +3
Query: 3 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 182
VG++GFGRIGRLV RAA G VD+VA+NDPFI+L YMVYMF+YDSTHGKFHG V+A+DG
Sbjct: 5 VGVDGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAEDG 64
Query: 183 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 362
KLV+DG A++++ +R+P+ I W YVVESTGVFTT+EKA AH K AK++VISAP
Sbjct: 65 KLVIDGKAITIFQERDPENIKWGDAGTAYVVESTGVFTTMEKAGAHLKGG-AKRIVISAP 123
Query: 363 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 542
SADAPMFVMGVNH KY SL I+SNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TAT
Sbjct: 124 SADAPMFVMGVNHFKYANSLKIISNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITAT 183
Query: 543 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVD 722
QKTVD PS KLWR GRGAAQN+IP IPEL+GK+TGMAFRVP +VSV+D
Sbjct: 184 QKTVDSPSGKLWRGGRGAAQNLIPASTGAAKAVGKVIPELDGKLTGMAFRVPTANVSVLD 243
Query: 723 LTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLT 902
LTC+L+K AKYD+IK +K ASE +KGIL YTE+EVVS DF G ++SSIFDA AGI+L
Sbjct: 244 LTCRLEKPAKYDDIKKVVKEASEGPLKGILGYTEDEVVSDDFNGSNHSSIFDAGAGIELN 303
Query: 903 DTFVKL 920
DTFVKL
Sbjct: 304 DTFVKL 309
>sp|O57479|G3P_COLLI Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 429 bits (1104), Expect = e-120
Identities = 214/306 (69%), Positives = 250/306 (81%)
Frame = +3
Query: 3 VGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDG 182
VG+NGFGRIGRLV RAA+ V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++G
Sbjct: 4 VGVNGFGRIGRLVTRAAILSAKVQVVAINDPFIDLNYMVYMFKYDSTHGHFRGTVKAENG 63
Query: 183 KLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAP 362
KLV++G+A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAP
Sbjct: 64 KLVINGNAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAP 122
Query: 363 SADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTAT 542
SADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TAT
Sbjct: 123 SADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITAT 182
Query: 543 QKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVD 722
QKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVD
Sbjct: 183 QKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVD 242
Query: 723 LTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAKAGIQLT 902
LTC+L+K AKYD+IK +K A++ +KGILAYTE++VVS DF GD +SS FDA AGI L
Sbjct: 243 LTCRLEKPAKYDDIKRVVKAAADGPLKGILAYTEDQVVSCDFNGDSHSSTFDAGAGIALN 302
Query: 903 DTFVKL 920
D FVKL
Sbjct: 303 DHFVKL 308
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,026,255
Number of Sequences: 369166
Number of extensions: 2194690
Number of successful extensions: 6199
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5707
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9414689480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)