Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_H16
(807 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q26065|ACT_PLAMG Actin, adductor muscle 532 e-151
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 532 e-151
sp|P30163|ACT2_ONCVO Actin-2 531 e-151
sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cyt... 531 e-151
sp|P41340|ACT3_LIMPO Actin-3 531 e-151
sp|P92176|ACT2_LUMTE Actin-2 531 e-151
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 531 e-151
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 531 e-151
sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin) 531 e-150
sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin) >gi|... 531 e-150
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 532 bits (1371), Expect = e-151
Identities = 260/269 (96%), Positives = 266/269 (98%)
Frame = +1
Query: 1 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 180
GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 24 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Query: 181 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL 360
EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL
Sbjct: 84 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL 143
Query: 361 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 540
YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 144 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Query: 541 TAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALF 720
TAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERFRCPE+LF
Sbjct: 204 TAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLF 263
Query: 721 QPSFLGLESVGIHETTYNSIMKCDVDIRK 807
QPSFLG+ES GIHETTYNSIMKCDVDIRK
Sbjct: 264 QPSFLGMESAGIHETTYNSIMKCDVDIRK 292
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 532 bits (1370), Expect = e-151
Identities = 260/269 (96%), Positives = 265/269 (98%)
Frame = +1
Query: 1 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 180
GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 23 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 82
Query: 181 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL 360
EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSL
Sbjct: 83 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 142
Query: 361 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 540
YASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 143 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 202
Query: 541 TAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALF 720
TAEREIVRDIKEKLCY+ALDF+ EM TAS+SSSLEKSYELPDGQVITIGNERFRCPEALF
Sbjct: 203 TAEREIVRDIKEKLCYVALDFEQEMATASSSSSLEKSYELPDGQVITIGNERFRCPEALF 262
Query: 721 QPSFLGLESVGIHETTYNSIMKCDVDIRK 807
QPSFLG+ES GIHETTYNSIMKCDVDIRK
Sbjct: 263 QPSFLGMESSGIHETTYNSIMKCDVDIRK 291
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 531 bits (1369), Expect = e-151
Identities = 258/269 (95%), Positives = 265/269 (98%)
Frame = +1
Query: 1 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 180
GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 24 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Query: 181 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL 360
EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSL
Sbjct: 84 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 143
Query: 361 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 540
YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 144 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Query: 541 TAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALF 720
TAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVIT+GNERFRCPEALF
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALF 263
Query: 721 QPSFLGLESVGIHETTYNSIMKCDVDIRK 807
QPSFLG+ES GIHETTYNSIMKCD+DIRK
Sbjct: 264 QPSFLGMESAGIHETTYNSIMKCDIDIRK 292
>sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cytoplasmic beta actin)
Length = 375
Score = 531 bits (1368), Expect = e-151
Identities = 259/269 (96%), Positives = 265/269 (98%)
Frame = +1
Query: 1 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 180
GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 23 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 82
Query: 181 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL 360
EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSL
Sbjct: 83 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 142
Query: 361 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 540
YASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 143 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 202
Query: 541 TAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALF 720
TAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERFRCPEALF
Sbjct: 203 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 262
Query: 721 QPSFLGLESVGIHETTYNSIMKCDVDIRK 807
QPSFLG+ES GIHETTYNSIMKCDVDIRK
Sbjct: 263 QPSFLGMESCGIHETTYNSIMKCDVDIRK 291
>sp|P41340|ACT3_LIMPO Actin-3
Length = 376
Score = 531 bits (1368), Expect = e-151
Identities = 259/269 (96%), Positives = 265/269 (98%)
Frame = +1
Query: 1 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 180
GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 24 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Query: 181 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL 360
EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSL
Sbjct: 84 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 143
Query: 361 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 540
YASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 144 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Query: 541 TAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALF 720
TAEREIVRDIKEKLCY+ALDFD EM TA++SSSLEKSYELPDGQVITIGNERFRCPEALF
Sbjct: 204 TAEREIVRDIKEKLCYVALDFDQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 263
Query: 721 QPSFLGLESVGIHETTYNSIMKCDVDIRK 807
QPSFLG+ES GIHETTYNSIMKCD+DIRK
Sbjct: 264 QPSFLGMESSGIHETTYNSIMKCDIDIRK 292
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 531 bits (1368), Expect = e-151
Identities = 260/269 (96%), Positives = 265/269 (98%)
Frame = +1
Query: 1 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 180
GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 24 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Query: 181 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL 360
EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSL
Sbjct: 84 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSL 143
Query: 361 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 540
YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 144 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
Query: 541 TAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALF 720
TAEREIVRDIKEKLCY+ALDF+ EM TASASSSLEKSYELPDGQVITIGNERFRCPEA+F
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMNTASASSSLEKSYELPDGQVITIGNERFRCPEAMF 263
Query: 721 QPSFLGLESVGIHETTYNSIMKCDVDIRK 807
SFLG+ESVGIHETTYNSIMKCDVDIRK
Sbjct: 264 HASFLGMESVGIHETTYNSIMKCDVDIRK 292
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 531 bits (1368), Expect = e-151
Identities = 258/269 (95%), Positives = 265/269 (98%)
Frame = +1
Query: 1 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 180
GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 24 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Query: 181 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL 360
EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSL
Sbjct: 84 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 143
Query: 361 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 540
YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 144 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTT 203
Query: 541 TAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALF 720
TAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+F
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMF 263
Query: 721 QPSFLGLESVGIHETTYNSIMKCDVDIRK 807
QPSFLG+E+ GIHETTYNSIMKCDVDIRK
Sbjct: 264 QPSFLGMEAAGIHETTYNSIMKCDVDIRK 292
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 531 bits (1368), Expect = e-151
Identities = 258/269 (95%), Positives = 266/269 (98%)
Frame = +1
Query: 1 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 180
GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 24 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Query: 181 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL 360
EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSL
Sbjct: 84 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 143
Query: 361 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 540
YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 144 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTT 203
Query: 541 TAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALF 720
TAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNERFRCPEALF
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNERFRCPEALF 263
Query: 721 QPSFLGLESVGIHETTYNSIMKCDVDIRK 807
QPSFLG+E+ GIHETTYNSIMKCDVDIRK
Sbjct: 264 QPSFLGMEAAGIHETTYNSIMKCDVDIRK 292
>sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 531 bits (1367), Expect = e-150
Identities = 259/269 (96%), Positives = 265/269 (98%)
Frame = +1
Query: 1 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 180
GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 23 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 82
Query: 181 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL 360
EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSL
Sbjct: 83 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 142
Query: 361 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 540
YASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 143 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 202
Query: 541 TAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALF 720
TAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERFRCPEALF
Sbjct: 203 TAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALF 262
Query: 721 QPSFLGLESVGIHETTYNSIMKCDVDIRK 807
QPSFLG+ES GIHETTYNSIMKCDVDIRK
Sbjct: 263 QPSFLGMESCGIHETTYNSIMKCDVDIRK 291
>sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin)
sp|P68142|ACT1_FUGRU Actin, cytoplasmic 1 (Beta-actin-1)
Length = 375
Score = 531 bits (1367), Expect = e-150
Identities = 259/269 (96%), Positives = 265/269 (98%)
Frame = +1
Query: 1 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 180
GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 23 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 82
Query: 181 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL 360
EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSL
Sbjct: 83 EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 142
Query: 361 YASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 540
YASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT
Sbjct: 143 YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 202
Query: 541 TAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALF 720
TAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERFRCPEALF
Sbjct: 203 TAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALF 262
Query: 721 QPSFLGLESVGIHETTYNSIMKCDVDIRK 807
QPSFLG+ES GIHETTYNSIMKCDVDIRK
Sbjct: 263 QPSFLGMESCGIHETTYNSIMKCDVDIRK 291
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,218,232
Number of Sequences: 369166
Number of extensions: 1892350
Number of successful extensions: 6086
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5933
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7666799535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)