Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_F10
(877 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 523 e-148
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 523 e-148
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 523 e-148
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 521 e-148
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 516 e-146
sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hs... 515 e-146
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 512 e-145
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 509 e-144
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 508 e-144
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 506 e-143
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 523 bits (1348), Expect = e-148
Identities = 259/286 (90%), Positives = 275/286 (96%)
Frame = +2
Query: 20 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 199
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 200 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 379
NTVFDAKRLIGR+FD++ VQSDMKHWPF VVN+ GRPK++VE+KGETK+F+PEE+SSMV
Sbjct: 64 TNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMV 123
Query: 380 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 559
L KMKEIAEAYLGK V +AVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAY
Sbjct: 124 LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY 183
Query: 560 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 739
GLDKKVG+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 740 EFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYE 877
EFKRKHKKDIS+NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYE
Sbjct: 244 EFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 523 bits (1348), Expect = e-148
Identities = 259/286 (90%), Positives = 275/286 (96%)
Frame = +2
Query: 20 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 199
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 200 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 379
NTVFDAKRLIGR+FD++ VQSDMKHWPF VVN+ GRPK++VE+KGETK+F+PEE+SSMV
Sbjct: 64 TNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMV 123
Query: 380 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 559
L KMKEIAEAYLGK V +AVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAY
Sbjct: 124 LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY 183
Query: 560 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 739
GLDKKVG+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 740 EFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYE 877
EFKRKHKKDIS+NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYE
Sbjct: 244 EFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 523 bits (1348), Expect = e-148
Identities = 259/286 (90%), Positives = 275/286 (96%)
Frame = +2
Query: 20 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 199
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 200 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 379
NTVFDAKRLIGR+FD++ VQSDMKHWPF VVN+ GRPK++VE+KGETK+F+PEE+SSMV
Sbjct: 64 TNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMV 123
Query: 380 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 559
L KMKEIAEAYLGK V +AVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAY
Sbjct: 124 LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY 183
Query: 560 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 739
GLDKKVG+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 740 EFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYE 877
EFKRKHKKDIS+NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYE
Sbjct: 244 EFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 521 bits (1343), Expect = e-148
Identities = 258/286 (90%), Positives = 276/286 (96%)
Frame = +2
Query: 20 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 199
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP 63
Query: 200 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 379
NTVFDAKRLIGR+FD+ VQSDMKHWPF+V+N++ RPK++VE+KGETK+F+PEEISSMV
Sbjct: 64 CNTVFDAKRLIGRRFDDGVVQSDMKHWPFEVINDSTRPKLQVEYKGETKSFYPEEISSMV 123
Query: 380 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 559
L+KMKEIAEAYLGK V +AVVTVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAY
Sbjct: 124 LVKMKEIAEAYLGKTVNNAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 183
Query: 560 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 739
GLDKKVG+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 740 EFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYE 877
EFKRK+KKDISDNKRAVRRLRTACERAKRTLSSS QA+IEIDSLYE
Sbjct: 244 EFKRKYKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 516 bits (1329), Expect = e-146
Identities = 256/286 (89%), Positives = 272/286 (95%)
Frame = +2
Query: 20 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 199
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 200 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 379
NTVFDAKRLIGR+FD++ VQSDMKHWPF VVN+ GRPK++VE+KGE K+F+PEE+SSMV
Sbjct: 64 TNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGEAKSFYPEEVSSMV 123
Query: 380 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 559
L KMKEIAEAYLGK V +AVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAY
Sbjct: 124 LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY 183
Query: 560 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 739
GLDKKVG+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 740 EFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYE 877
EFKR KKDIS+NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYE
Sbjct: 244 EFKRNDKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
>sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hsc70.1)
Length = 686
Score = 515 bits (1327), Expect = e-146
Identities = 255/286 (89%), Positives = 272/286 (95%)
Frame = +2
Query: 20 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 199
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 200 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 379
NTVFDAKRLIGR+FD+ VQSDM WPF+V+N+ RPK++VE+KGETK+F+PEE+SSMV
Sbjct: 64 TNTVFDAKRLIGRRFDDHVVQSDMNDWPFNVINDNTRPKVQVEYKGETKSFYPEEVSSMV 123
Query: 380 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 559
L KMKEIAEAYLGK V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAY
Sbjct: 124 LTKMKEIAEAYLGKTVNNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 183
Query: 560 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 739
GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 740 EFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYE 877
EFKRK+KKDISDNKRAVRRLR+ACERAKRTLSSS QA+IEIDSLYE
Sbjct: 244 EFKRKYKKDISDNKRAVRRLRSACERAKRTLSSSTQASIEIDSLYE 289
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 512 bits (1318), Expect = e-145
Identities = 250/286 (87%), Positives = 272/286 (95%)
Frame = +2
Query: 20 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 199
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP 63
Query: 200 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 379
NT+FDAKRLIGR+F++S VQ+DMKHWPF V+++ GRP+++VE+KGE K F+PEEISSMV
Sbjct: 64 TNTIFDAKRLIGRRFEDSVVQADMKHWPFKVISDGGRPRLEVEYKGEAKNFYPEEISSMV 123
Query: 380 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 559
L+KMKEIAEAYLGK + +AV+TVPAYFNDSQRQ TKDAG ISGLNVLRIINEPTAAAIAY
Sbjct: 124 LVKMKEIAEAYLGKSINNAVITVPAYFNDSQRQRTKDAGTISGLNVLRIINEPTAAAIAY 183
Query: 560 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 739
GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIF++KSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFDLKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 740 EFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYE 877
EFKRKHKKDISDNKRAVRRL TACERAKRTLSSS QA+IEIDSLYE
Sbjct: 244 EFKRKHKKDISDNKRAVRRLATACERAKRTLSSSTQASIEIDSLYE 289
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 509 bits (1311), Expect = e-144
Identities = 249/284 (87%), Positives = 272/284 (95%)
Frame = +2
Query: 26 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 205
A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT+RLIGDAAKNQVAMNPNN
Sbjct: 6 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTDRLIGDAAKNQVAMNPNN 65
Query: 206 TVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMVLI 385
T+FDAKRLIGRKF+++TVQ+DMKHWPF+VV++ G+PKIKV +KGE KTFFPEE+SSMVL
Sbjct: 66 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 125
Query: 386 KMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGL 565
KMKE AEAYLGK V++AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGL
Sbjct: 126 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
Query: 566 DKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEF 745
DKK ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF+QEF
Sbjct: 186 DKKGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 245
Query: 746 KRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYE 877
KRK+KKD++ NKRA+RRLRTACERAKRTLSSS QA+IEIDSL+E
Sbjct: 246 KRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE 289
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 508 bits (1309), Expect = e-144
Identities = 252/286 (88%), Positives = 269/286 (94%)
Frame = +2
Query: 20 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 199
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 200 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 379
NTV DA RL GR+FD+ VQSDMKHWPF+V+N+ RPK++VE+KGE+K+F+PEEISSMV
Sbjct: 64 TNTVLDANRLNGRQFDDGVVQSDMKHWPFNVINDNSRPKVQVEYKGESKSFYPEEISSMV 123
Query: 380 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 559
L KMKEIAEAYLGK V +AV+TVPAY NDSQRQATKDAG ISGLNVL IINEPTAAAIAY
Sbjct: 124 LTKMKEIAEAYLGKTVSNAVITVPAYSNDSQRQATKDAGTISGLNVLVIINEPTAAAIAY 183
Query: 560 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 739
GLDKKVG+ERNVLIFDLGGG+FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGAERNVLIFDLGGGSFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIT 243
Query: 740 EFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYE 877
EFKRKHKKDISDNKRAVRRLRTACERAKRTLSSS QA+IEIDSLYE
Sbjct: 244 EFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 506 bits (1302), Expect = e-143
Identities = 254/288 (88%), Positives = 269/288 (93%), Gaps = 2/288 (0%)
Frame = +2
Query: 20 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 199
G AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 64
Query: 200 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 379
NT+FDAKRLIGRKF+++TVQSDMKHWPF VV+E G+PK++VE+KGETKTFFPEEISSMV
Sbjct: 65 TNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMV 124
Query: 380 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 559
L KMKEIAEAYLG V AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAY
Sbjct: 125 LTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAY 184
Query: 560 GLDKK--VGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 733
GLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+H
Sbjct: 185 GLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHL 244
Query: 734 IQEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYE 877
+EFKRKHKKDI NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYE
Sbjct: 245 AEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 292
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,005,821
Number of Sequences: 369166
Number of extensions: 1779083
Number of successful extensions: 6763
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5812
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8694177530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)