Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_E23
(570 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 281 6e-76
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 281 8e-76
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 281 8e-76
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 281 8e-76
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 281 8e-76
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 278 7e-75
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 275 8e-74
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 274 1e-73
sp|O23755|EF2_BETVU Elongation factor 2 (EF-2) 237 2e-62
sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2) 236 2e-62
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 281 bits (720), Expect = 6e-76
Identities = 130/179 (72%), Positives = 148/179 (82%)
Frame = +1
Query: 4 VAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPC 183
VA F WATK+GVLCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YA VLTA P
Sbjct: 680 VAGFQWATKEGVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTAQPR 739
Query: 184 LLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSE 363
L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++
Sbjct: 740 LMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTAD 799
Query: 364 LRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 540
LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 800 LRSNTGGQAFPQCVFDHWQILPGDPFDSASRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 281 bits (719), Expect = 8e-76
Identities = 130/179 (72%), Positives = 148/179 (82%)
Frame = +1
Query: 4 VAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPC 183
VA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P
Sbjct: 680 VAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPR 739
Query: 184 LLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSE 363
L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++
Sbjct: 740 LMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTAD 799
Query: 364 LRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 540
LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 800 LRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 281 bits (719), Expect = 8e-76
Identities = 130/179 (72%), Positives = 148/179 (82%)
Frame = +1
Query: 4 VAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPC 183
VA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P
Sbjct: 680 VAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPR 739
Query: 184 LLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSE 363
L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++
Sbjct: 740 LMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTAD 799
Query: 364 LRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 540
LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 800 LRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 281 bits (719), Expect = 8e-76
Identities = 130/179 (72%), Positives = 148/179 (82%)
Frame = +1
Query: 4 VAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPC 183
VA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P
Sbjct: 680 VAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPR 739
Query: 184 LLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSE 363
L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++
Sbjct: 740 LMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTAD 799
Query: 364 LRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 540
LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 800 LRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 281 bits (719), Expect = 8e-76
Identities = 130/179 (72%), Positives = 148/179 (82%)
Frame = +1
Query: 4 VAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPC 183
VA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P
Sbjct: 680 VAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPR 739
Query: 184 LLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSE 363
L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++
Sbjct: 740 LMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTAD 799
Query: 364 LRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 540
LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 800 LRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 278 bits (711), Expect = 7e-75
Identities = 132/179 (73%), Positives = 149/179 (83%)
Frame = +1
Query: 4 VAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPC 183
VA F WAT++GVL +ENMRGVRFN+HDVTLHADAIHRGGGQIIPTARR FYASVLTA P
Sbjct: 674 VAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPR 733
Query: 184 LLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSE 363
LLEPVY EIQ PE A+GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF FT++
Sbjct: 734 LLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTAD 793
Query: 364 LRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 540
LR+ TGGQAFPQCVFDHWQ+ PG+PL+ +KP V DTRKRKGL E VP LD +LDK+
Sbjct: 794 LRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLDKM 852
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 275 bits (702), Expect = 8e-74
Identities = 128/179 (71%), Positives = 146/179 (81%)
Frame = +1
Query: 4 VAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPC 183
VA F WATK+G LCEENMRGVRF++HDVTLHADAIHR GGQIIPTARRC YASVLTA P
Sbjct: 680 VAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLYASVLTAQPR 739
Query: 184 LLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSE 363
L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++
Sbjct: 740 LMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTAD 799
Query: 364 LRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 540
LR+ TGGQAFPQCVFDHWQ+ PG+P D S+ V +TRKRKGL E +P LD FLDKL
Sbjct: 800 LRSNTGGQAFPQCVFDHWQILPGDPFDNSSRGSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 274 bits (700), Expect = 1e-73
Identities = 126/179 (70%), Positives = 149/179 (83%)
Frame = +1
Query: 4 VAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPC 183
VA F WA+K+G+L +EN+RGVRFNI+DVTLHADAIHRGGGQIIPT RRC YA+ +TA P
Sbjct: 666 VAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPR 725
Query: 184 LLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSE 363
L+EPVY CEIQ PE A+GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF FT++
Sbjct: 726 LMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTAD 785
Query: 364 LRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 540
LR+ TGGQAFPQCVFDHWQ+ PG+P +P SKP V+DTRKRKGL E +P L ++LDKL
Sbjct: 786 LRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL 844
>sp|O23755|EF2_BETVU Elongation factor 2 (EF-2)
Length = 843
Score = 237 bits (604), Expect = 2e-62
Identities = 117/179 (65%), Positives = 133/179 (74%)
Frame = +1
Query: 4 VAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPC 183
VA F WA+K+G L EENMRG+ F + DV LH DAIHRGGGQIIPTARR FYAS LTA P
Sbjct: 665 VAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPR 724
Query: 184 LLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSE 363
LLEPVY EIQ PE ALGGIYS LN++RG +F EMQ GTP Y +KAYLPV ESF F+S
Sbjct: 725 LLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSST 784
Query: 364 LRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 540
LRA T GQAFPQCVFDHW++ P +PL+ S+ V RKRKGL E + L +F DKL
Sbjct: 785 LRASTSGQAFPQCVFDHWEMMPSDPLEAGSQASTLVSVIRKRKGLKEQMTPLSEFEDKL 843
>sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2)
Length = 842
Score = 236 bits (603), Expect = 2e-62
Identities = 118/179 (65%), Positives = 134/179 (74%)
Frame = +1
Query: 4 VAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPC 183
VAAF WA+K+G + EEN+R RFNI DV LHADAIHRGGGQIIPTARR YAS L ASP
Sbjct: 664 VAAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPI 723
Query: 184 LLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSE 363
+ EPV+ EIQ E A+GGIYS LNK+RG +FSE Q GTP Y +KAYLPVNESF FT E
Sbjct: 724 IQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGE 783
Query: 364 LRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 540
LR T GQAFPQ VFDHW G+PLDP SKPG V + RKRKGL E+VP ++ D+L
Sbjct: 784 LRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,253,460
Number of Sequences: 369166
Number of extensions: 1490707
Number of successful extensions: 3185
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3072
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4177115900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)