Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_D08
(865 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 275 1e-73
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 271 2e-72
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 271 2e-72
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 268 1e-71
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 265 2e-70
sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor 259 5e-69
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 259 5e-69
sp|Q9GLE3|CATK_PIG Cathepsin K precursor 257 3e-68
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 256 4e-68
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 256 4e-68
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 275 bits (703), Expect = 1e-73
Identities = 146/287 (50%), Positives = 184/287 (64%), Gaps = 6/287 (2%)
Frame = +1
Query: 1 SLVVVAI-----TAVPQKFSVNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQ 165
SLV+ A +AVP KF N L+ +W +K T R Y + RR +WE+N+K I+
Sbjct: 4 SLVLAAFCLGIASAVP-KFDQN--LDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIE 60
Query: 166 KHNLEYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASV 345
HN EY GKH +++ +N F DMTNEEF+ + +G + + +G + P + LP SV
Sbjct: 61 LHNGEYSQGKHGFTMAMNAFGDMTNEEFR-QMMGCFRNQKFRKGKVFREPLFLD-LPKSV 118
Query: 346 DWRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXX 525
DWR+KGYVTPVKNQ+QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS
Sbjct: 119 DWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGC 178
Query: 526 XXXLMDNAFRYIKDQ-GIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLAN 702
M AF+Y+K+ G++SE YPY A D CK P V TGFT + E L
Sbjct: 179 NGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMK 238
Query: 703 AVATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYG 843
AVATVGP+SVA+DAGH+SFQ YKSGIY E CS+ LDHGVL VGYG
Sbjct: 239 AVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYG 285
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 271 bits (693), Expect = 2e-72
Identities = 140/263 (53%), Positives = 169/263 (64%), Gaps = 1/263 (0%)
Frame = +1
Query: 58 LNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMT 237
L +W +K R Y + RR +WE+N+K I+ HN EY GKH++++ +N F DMT
Sbjct: 25 LEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMT 84
Query: 238 NEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFS 417
+EEF+ G KP +G + P P SVDWR+KGYVTPVKNQ QCGSCW+FS
Sbjct: 85 SEEFRQVMNGFQNRKPR-KGKVFQEPLFYEA-PRSVDWREKGYVTPVKNQGQCGSCWAFS 142
Query: 418 ATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDY 594
ATG+LEGQ FRK RLIS SEQ LVDCS LMD AF+Y++D G++SE Y
Sbjct: 143 ATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESY 202
Query: 595 PYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKS 774
PY AT+ +CK NP V TGF DI Q E L AVATVGP+SVAIDAGH SF YK
Sbjct: 203 PYEATEESCKYNPKYSVANDTGFVDIPKQ-EKALMKAVATVGPISVAIDAGHESFLFYKE 261
Query: 775 GIYNEESCSTTQLDHGVLAVGYG 843
GIY E CS+ +DHGVL VGYG
Sbjct: 262 GIYFEPDCSSEDMDHGVLVVGYG 284
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 271 bits (693), Expect = 2e-72
Identities = 143/279 (51%), Positives = 174/279 (62%), Gaps = 2/279 (0%)
Frame = +1
Query: 13 VAITAVPQKFSVNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLG 192
+ I + KF + LN +W +K T R Y + RR +WE+N+K I+ HN EY G
Sbjct: 12 LGIASAAPKF--DQSLNAQWYQWKATHRRLYGMNEEGWRRAVWEKNMKMIELHNREYSQG 69
Query: 193 KHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVT 372
KH +++ +N F DMTNEEF+ G K +G + P +P SVDWR+KGYVT
Sbjct: 70 KHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHK-KGKMFQEPL-FAEIPKSVDWREKGYVT 127
Query: 373 PVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAF 552
PVKNQ QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS LMDNAF
Sbjct: 128 PVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAF 187
Query: 553 RYIKDQ-GIESEGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPV 726
RY+KD G++SE YPY D TC P TGF D+ Q E L AVAT+GP+
Sbjct: 188 RYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDL-PQREKALMKAVATLGPI 246
Query: 727 SVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYG 843
SVAIDAGH SFQ YKSGIY + CS+ LDHGVL VGYG
Sbjct: 247 SVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYG 285
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 268 bits (686), Expect = 1e-71
Identities = 144/282 (51%), Positives = 171/282 (60%), Gaps = 2/282 (0%)
Frame = +1
Query: 4 LVVVAITAVPQKFSVNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEY 183
L V+ + ++ L+ W +K T R Y + RR +WE+N K I HN EY
Sbjct: 7 LTVLCLGVASAAPKLDPNLDAHWHQWKATHRRLYGMNEEEWRRAVWEKNKKIIDLHNQEY 66
Query: 184 DLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKG 363
GKH + + +N F DMTNEEF+ G K +G + P + V P SVDW +KG
Sbjct: 67 SEGKHAFRMAMNAFGDMTNEEFRQVMNGFQNQKHK-KGKLFHEPLLVDV-PKSVDWTKKG 124
Query: 364 YVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMD 543
YVTPVKNQ QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS LMD
Sbjct: 125 YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMD 184
Query: 544 NAFRYIKDQ-GIESEGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATV 717
NAF+YIKD G++SE YPY ATD +C P TGF DI Q E L AVATV
Sbjct: 185 NAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDI-PQREKALMKAVATV 243
Query: 718 GPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYG 843
GP+SVAIDAGH SFQ YKSGIY + CS LDHGVL VGYG
Sbjct: 244 GPISVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVLVVGYG 285
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 265 bits (676), Expect = 2e-70
Identities = 138/268 (51%), Positives = 171/268 (63%), Gaps = 2/268 (0%)
Frame = +1
Query: 46 VNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQF 225
++ L+ +W +K T GR Y + RR +WE+N+K I+ HN EY GKH +S+ +N F
Sbjct: 21 LDQNLDADWYKWKATHGRLYGMNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAF 80
Query: 226 ADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSC 405
DMTNEEF+ G K +G + + V P SVDWR+KGYVT VKNQ QCGSC
Sbjct: 81 GDMTNEEFRQVMNGFQNQKHK-KGKVFHESLVLEV-PKSVDWREKGYVTAVKNQGQCGSC 138
Query: 406 WSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIES 582
W+FSATG+LEGQ FRK +L+S SEQ LVDCS LMDNAF+Y+KD G+++
Sbjct: 139 WAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDT 198
Query: 583 EGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASF 759
E YPY + +C P TGF DI Q E L AVATVGP+SVAIDAGH+SF
Sbjct: 199 EESYPYLGRETNSCTYKPECSAANDTGFVDI-PQREKALMKAVATVGPISVAIDAGHSSF 257
Query: 760 QLYKSGIYNEESCSTTQLDHGVLAVGYG 843
Q YKSGIY + CS+ LDHGVL VGYG
Sbjct: 258 QFYKSGIYYDPDCSSKDLDHGVLVVGYG 285
>sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor
Length = 326
Score = 259 bits (663), Expect = 5e-69
Identities = 126/265 (47%), Positives = 168/265 (63%)
Frame = +1
Query: 70 WETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEF 249
W +K + ++Y+ D RR IWE+N+K+IQ+HNL +DLG TY+LGLNQF DMT EEF
Sbjct: 21 WHQWKRMYNKEYNGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEF 80
Query: 250 KAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGS 429
KAKYL M + N +P +DWR+ GYVT VK+Q CGSCW+FS TG+
Sbjct: 81 KAKYLTEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGT 140
Query: 430 LEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQGIESEGDYPYTAT 609
+EGQY + ISFSEQQLVDCS LM+NA++Y+K G+E+E YPYTA
Sbjct: 141 MEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPYTAV 200
Query: 610 DGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKSGIYNE 789
+G C+ N V K TG+ + S +E +L N V P +VA+D + F +Y+SGIY
Sbjct: 201 EGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDV-ESDFMMYRSGIYQS 259
Query: 790 ESCSTTQLDHGVLAVGYGTQIGKKY 864
++CS +++H VLAVGYGTQ G Y
Sbjct: 260 QTCSPLRVNHAVLAVGYGTQGGTDY 284
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 259 bits (663), Expect = 5e-69
Identities = 140/290 (48%), Positives = 179/290 (61%), Gaps = 9/290 (3%)
Frame = +1
Query: 4 LVVVAITAVPQKFSVNSELNEEWETYKTTFGRKY-DELTDITRRLIWEQNLKYIQKHNLE 180
+ ++A+ A+ Q S + EEW TYK + Y +E+ + R I+ +N I KHN
Sbjct: 6 VALLALVALTQAISPLDLIKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQL 65
Query: 181 YDLGKHTYSLGLNQFADMTNEEFKAKYLG-------IMKTKPTLEGSTYMAPENIGVLPA 339
+ GK +Y LGLN++ADM + EFK G +M+ + L G+TY+ P ++ V P
Sbjct: 66 FAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTV-PK 124
Query: 340 SVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXX 519
SVDWR+ G VT VK+Q CGSCW+FS+TG+LEGQ+FRK L+S SEQ LVDCS
Sbjct: 125 SVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNN 184
Query: 520 XXXXXLMDNAFRYIKDQG-IESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDL 696
LMDNAFRYIKD G I++E YPY D +C N + I TGF DI +E +
Sbjct: 185 GCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKM 244
Query: 697 ANAVATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGT 846
AVAT+GPVSVAIDA H SFQLY G+YNE C LDHGVL VGYGT
Sbjct: 245 KKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGT 294
>sp|Q9GLE3|CATK_PIG Cathepsin K precursor
Length = 330
Score = 257 bits (656), Expect = 3e-68
Identities = 137/290 (47%), Positives = 180/290 (62%), Gaps = 4/290 (1%)
Frame = +1
Query: 7 VVVAITAVPQKFSVNSELNEEWETYKTTFGRKYDELTD-ITRRLIWEQNLKYIQKHNLEY 183
VV+ + + L+ +WE +K T+ ++Y+ D I+RRLIWE+NLK+I HNLE
Sbjct: 6 VVLLLPVMSSALYPEEILDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEA 65
Query: 184 DLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGS--TYMAPENIGVLPASVDWRQ 357
LG HTY L +N DMT+EE K G+ K P+ S T P+ G P S+D+R+
Sbjct: 66 SLGVHTYELAMNHLGDMTSEEVVQKMTGL-KVPPSHSRSNDTLYIPDWEGRTPDSIDYRK 124
Query: 358 KGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXL 537
KGYVTPVKNQ QCGSCW+FS+ G+LEGQ +K +L++ S Q LVDC
Sbjct: 125 KGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGY 182
Query: 538 MDNAFRYI-KDQGIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVAT 714
M NAF+Y+ K++GI+SE YPY D C NP+ KC G+ +I NE L AVA
Sbjct: 183 MTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 242
Query: 715 VGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQIGKKY 864
VGPVSVAIDA SFQ Y G+Y +E+C++ L+H VLAVGYG Q GKK+
Sbjct: 243 VGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKH 292
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 256 bits (655), Expect = 4e-68
Identities = 137/260 (52%), Positives = 165/260 (63%), Gaps = 1/260 (0%)
Frame = +1
Query: 67 EWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEE 246
EW +K+T R Y + RR IWE+N++ IQ HN EY G+H +S+ +N F DMTNEE
Sbjct: 28 EWHQWKSTHRRLYGTNEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEE 87
Query: 247 FKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATG 426
F+ G K +G + P + + P SVDWR+KG VTPVKNQ QCGSCW+FSA+G
Sbjct: 88 FRQVVNGYRHQKHK-KGRLFQEPLMLKI-PKSVDWREKGCVTPVKNQGQCGSCWAFSASG 145
Query: 427 SLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYPYT 603
LEGQ F K +LIS SEQ LVDCS LMD AF+YIK+ G++SE YPY
Sbjct: 146 CLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYE 205
Query: 604 ATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKSGIY 783
A DG+CK V TGF DI Q E L AVATVGP+SVA+DA H S Q Y SGIY
Sbjct: 206 AKDGSCKYRAEFAVANDTGFVDI-PQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIY 264
Query: 784 NEESCSTTQLDHGVLAVGYG 843
E +CS+ LDHGVL VGYG
Sbjct: 265 YEPNCSSKNLDHGVLLVGYG 284
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 256 bits (655), Expect = 4e-68
Identities = 135/262 (51%), Positives = 166/262 (63%), Gaps = 1/262 (0%)
Frame = +1
Query: 61 NEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTN 240
N +W +K+T R Y + RR +WE+N++ IQ HN EY GKH +++ +N F DMTN
Sbjct: 26 NAQWHQWKSTHRRLYGTNEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTN 85
Query: 241 EEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSA 420
EEF+ G K +G + P + + P +VDWR+KG VTPVKNQ QCGSCW+FSA
Sbjct: 86 EEFRQIVNGYRHQKHK-KGRLFQEPLMLQI-PKTVDWREKGCVTPVKNQGQCGSCWAFSA 143
Query: 421 TGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYP 597
+G LEGQ F K +LIS SEQ LVDCS LMD AF+YIK+ G++SE YP
Sbjct: 144 SGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYP 203
Query: 598 YTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKSG 777
Y A DG+CK V TGF DI Q E L AVATVGP+SVA+DA H S Q Y SG
Sbjct: 204 YEAKDGSCKYRAEYAVANDTGFVDI-PQQEKALMKAVATVGPISVAMDASHPSLQFYSSG 262
Query: 778 IYNEESCSTTQLDHGVLAVGYG 843
IY E +CS+ LDHGVL VGYG
Sbjct: 263 IYYEPNCSSKDLDHGVLVVGYG 284
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.315 0.131 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,965,257
Number of Sequences: 369166
Number of extensions: 1839361
Number of successful extensions: 4204
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3752
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)