Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_013_B06
(781 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9UJ78|ZMYM5_HUMAN Zinc finger MYM-type protein 5 (Zinc ... 40 0.005
sp|Q75F47|ATG18_ASHGO Autophagy-related protein 18 38 0.035
sp|Q9S597|C27AA_BACUH Pesticidal crystal protein cry27Aa (I... 37 0.046
sp|P54673|PI3K1_DICDI Phosphatidylinositol 3-kinase 1 (PI3-... 34 0.51
sp|P54352|EAS_DROME Ethanolamine kinase (EK) (Easily shocke... 33 0.67
sp|O00841|CUDA_DICDI Putative transcriptional regulator cudA 33 0.67
sp|P18160|KYK1_DICDI Non-receptor tyrosine kinase spore lys... 33 0.87
sp|P70047|MYT1_XENLA Myelin transcription factor 1 (X-MyT1) 33 0.87
sp|P09547|SWI1_YEAST Transcription regulatory protein SWI1 ... 33 1.1
sp|Q05319|STUB_DROME Serine proteinase stubble (Stubble-stu... 32 1.5
>sp|Q9UJ78|ZMYM5_HUMAN Zinc finger MYM-type protein 5 (Zinc finger protein 237) (Zinc
finger protein 198-like 1)
Length = 382
Score = 40.4 bits (93), Expect = 0.005
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Frame = +2
Query: 230 PASPIIMN--DARISDDFDN----FVSAVPMQPAGAPASTTSHFDELDFLFASSSNNALH 391
PA P++ ++ + DD D+ F+ ++ APA D+ +F+FASS N
Sbjct: 38 PACPLVSRSRNSPVEDDDDDDDVVFIESIQPPSISAPAIA----DQRNFIFASSKNEKPQ 93
Query: 392 HRRPIIEPNTQDSASSAKNISDT 460
+I P+++D AS NIS+T
Sbjct: 94 GNYSVIPPSSRDLASQKGNISET 116
>sp|Q75F47|ATG18_ASHGO Autophagy-related protein 18
Length = 537
Score = 37.7 bits (86), Expect = 0.035
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Frame = +2
Query: 344 DELDFLFASSSNNALHHRRPIIEPNTQDSASSAKNISDTYDSKNAGKVGATWSNVGSID- 520
D+ +FL ASSSN +H + + +PN ++S+++A N SD + + GA VG D
Sbjct: 314 DDNEFLAASSSNKTVHIFK-LGKPNAENSSAAATN-SDDDEGEADSDDGADDDGVGDSDD 371
Query: 521 ----ITLDSLGNRRHTVGSAI--TSSKSLNQLQKQNSYN 619
++++S N H I +S K++ ++ +++S N
Sbjct: 372 TRSTVSIESFDNGSHQTREPIVDSSRKTVGRMIRKSSQN 410
>sp|Q9S597|C27AA_BACUH Pesticidal crystal protein cry27Aa (Insecticidal delta-endotoxin
CryXXVIIA(a)) (Crystaline entomocidal protoxin) (94 kDa
crystal protein)
Length = 826
Score = 37.4 bits (85), Expect = 0.046
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 5/153 (3%)
Frame = +2
Query: 251 NDARISDDFDNFVSAVPMQPAGAPASTTSH----FDELDFLFASSSNNALHHRRPIIEPN 418
N +IS D + + P G P + TS +D+ + + NN + +PN
Sbjct: 662 NTTKISGDQLLIIDKIEFIPVGIPLNQTSEGYNTYDQNTNSYNQNYNNYNQNMDTTYQPN 721
Query: 419 TQDSASSAKNISDT-YDSKNAGKVGATWSNVGSIDITLDSLGNRRHTVGSAITSSKSLNQ 595
+ ++ + D Y+ +++ T DS N VGS N
Sbjct: 722 YDNYKQNSSGMYDNPYNQNPKDSYNQNYTD------TYDSGYNNSQNVGS--------NY 767
Query: 596 LQKQNSYNSNNANMFSASRNQTSNQSEQINTHT 694
Q+ N+YN + NM++ S N ++ + N ++
Sbjct: 768 NQEYNTYNQDTENMYNQSYNNYNSDNNNYNQNS 800
>sp|P54673|PI3K1_DICDI Phosphatidylinositol 3-kinase 1 (PI3-kinase) (PtdIns-3-kinase)
(PI3K)
Length = 1570
Score = 33.9 bits (76), Expect = 0.51
Identities = 21/90 (23%), Positives = 43/90 (47%)
Frame = +2
Query: 416 NTQDSASSAKNISDTYDSKNAGKVGATWSNVGSIDITLDSLGNRRHTVGSAITSSKSLNQ 595
N+ +S+S+ N + +KN + + ++N+ + T S N H I + N
Sbjct: 2 NSIESSSNDSNEINKNSNKNNTHLNSNYNNIYKNNST-SSNNNNNHNNIEIIGIDNNKNN 60
Query: 596 LQKQNSYNSNNANMFSASRNQTSNQSEQIN 685
+ N N+NN N+ ++ + Q+++IN
Sbjct: 61 NKNNNDNNNNNNNIDKKRKDSKNKQNQEIN 90
>sp|P54352|EAS_DROME Ethanolamine kinase (EK) (Easily shocked protein)
Length = 517
Score = 33.5 bits (75), Expect = 0.67
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +2
Query: 464 DSKNAGKVGATWSNVGSIDITLDSLGNRRHTVGSAITSSKSLNQLQKQNSYNSNNANMFS 643
++K+ G ++ G+ + DSL R TV S NQ+Q Q + +SN+ + +
Sbjct: 4 ETKSNSYTGQISTSGGNPKVMKDSLSLVRQTVNQQTLSLSQSNQVQNQLNSHSNSNSYPN 63
Query: 644 ASRNQTSNQSEQ 679
S ++ N++EQ
Sbjct: 64 PSGSENKNENEQ 75
>sp|O00841|CUDA_DICDI Putative transcriptional regulator cudA
Length = 791
Score = 33.5 bits (75), Expect = 0.67
Identities = 26/101 (25%), Positives = 41/101 (40%)
Frame = +2
Query: 386 LHHRRPIIEPNTQDSASSAKNISDTYDSKNAGKVGATWSNVGSIDITLDSLGNRRHTVGS 565
LHH + + Q +N+ D +S N G+T S +
Sbjct: 49 LHHLQ---QQQQQPQQQQLRNVPDYSNSPNGTTNGSTMSP-------------------N 86
Query: 566 AITSSKSLNQLQKQNSYNSNNANMFSASRNQTSNQSEQINT 688
I ++ + N N+ ++NN N +AS N TSN+S NT
Sbjct: 87 CINANNNNNNNNSNNNNSNNNNNNNNASNNLTSNKSSSTNT 127
>sp|P18160|KYK1_DICDI Non-receptor tyrosine kinase spore lysis A (Tyrosine-protein kinase
1)
Length = 1584
Score = 33.1 bits (74), Expect = 0.87
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Frame = +2
Query: 368 SSSNNALHHRRPIIEPNTQDSASSAKNISDTYDSKNAGKVGATWSNVGSIDITLDSLGNR 547
+++NN + + + T S SS N D + N +N + + ++ N
Sbjct: 416 NNNNNIIGNGKITTTTTTSTSPSSINNNEDISSNNNNNNNNNNNNNNNNNNNNNNNNNNN 475
Query: 548 RHTVGSAITSSKSLNQL------QKQNSYNSNNANMFSASRNQTSNQSEQINTHTH 697
+ S+ T++ ++N N+ N+NN+N S S N N + N + +
Sbjct: 476 NNNSNSSNTNNNNINNTTNNNNSNSNNNNNNNNSNSNSNSNNNNINNNNNNNNNNN 531
>sp|P70047|MYT1_XENLA Myelin transcription factor 1 (X-MyT1)
Length = 1122
Score = 33.1 bits (74), Expect = 0.87
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +2
Query: 509 GSIDITLDSLGNRRHTVGSAITSS-----KSLNQLQKQNSYNSNNANMFSASRNQTSNQS 673
G++D++++ R T S+ + S KS +Q Q+QN ++ ++NM S +QTS Q
Sbjct: 655 GTLDLSMNKHRKRESTFPSSSSCSSSPSMKSPDQSQRQNCTSATSSNMTSPHSSQTSRQD 714
Query: 674 E 676
+
Sbjct: 715 D 715
>sp|P09547|SWI1_YEAST Transcription regulatory protein SWI1 (SWI/SNF complex component
SWI1) (Transcription regulatory protein ADR6)
(Regulatory protein GAM3)
Length = 1314
Score = 32.7 bits (73), Expect = 1.1
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +2
Query: 407 IEPNTQDSASSAKNISDTYDSKNAGKVGATWSNVGSID--ITLDSLGNRRHTVGSAITSS 580
++ +Q+S+SS N +++ + NA + ++N S + +T + L + S SS
Sbjct: 210 VQSISQNSSSSTPN-TNSNSTPNANQQFLPFNNSASNNGNLTSNQLISNYAASNSMDRSS 268
Query: 581 KSLNQL---QKQNSYNSNNANMFSASRNQTSNQS 673
+ N+ N+ NSNN NM + S N+TSN +
Sbjct: 269 SASNEFVPNTSDNNNNSNNHNMRNNSNNKTSNNN 302
>sp|Q05319|STUB_DROME Serine proteinase stubble (Stubble-stubbloid protein) [Contains:
Serine proteinase stubble non-catalytic chain; Serine
proteinase stubble catalytic chain]
Length = 787
Score = 32.3 bits (72), Expect = 1.5
Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 2/126 (1%)
Frame = +2
Query: 299 PMQPAGAPASTTSHFDELDFLFASSSNNALHHR--RPIIEPNTQDSASSAKNISDTYDSK 472
P P P ST++ ++ + ++ HR RP + P T +ASS+ + + S
Sbjct: 350 PPPPPSVPPSTSTSTTSTSLIWPAQTHPPQPHRPTRPQLSPGTSLAASSSSHWPSSTTST 409
Query: 473 NAGKVGATWSNVGSIDITLDSLGNRRHTVGSAITSSKSLNQLQKQNSYNSNNANMFSASR 652
+ T + + T + RR T++K Q+ + S+++ ++S+
Sbjct: 410 TSSTTSTTTTTTTTRRTTTPTTTTRR------TTTNKPTRPYQRPTTATSSSSTSTTSSK 463
Query: 653 NQTSNQ 670
T+ +
Sbjct: 464 TPTTTR 469
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,690,311
Number of Sequences: 369166
Number of extensions: 2284361
Number of successful extensions: 7764
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7713
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7308943600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)