Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_P20
(175 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q13627|DYR1A_HUMAN Dual specificity tyrosine-phosphoryla... 43 3e-04
sp|Q61214|DYR1A_MOUSE Dual specificity tyrosine-phosphoryla... 43 3e-04
sp|Q63470|DYR1A_RAT Dual specificity tyrosine-phosphorylati... 43 3e-04
sp|Q9Y463|DYR1B_HUMAN Dual specificity tyrosine-phosphoryla... 42 3e-04
sp|Q9Z188|DYR1B_MOUSE Dual specificity tyrosine-phosphoryla... 42 3e-04
sp|Q6C3J2|IPL1_YARLI Spindle assembly checkpoint kinase (Au... 42 3e-04
sp|Q96NX5|KCC1G_HUMAN Calcium/calmodulin-dependent protein ... 42 6e-04
sp|Q09147|FGFR2_DROME Fibroblast growth factor receptor hom... 42 6e-04
sp|Q91VB2|KCC1G_MOUSE Calcium/calmodulin-dependent protein ... 41 7e-04
sp|O70150|KCC1B_RAT Calcium/calmodulin-dependent protein ki... 41 7e-04
>sp|Q13627|DYR1A_HUMAN Dual specificity tyrosine-phosphorylation regulated kinase 1A
(Protein kinase minibrain homolog) (MNBH) (HP86) (Dual
specificity YAK1-related kinase)
Length = 763
Score = 42.7 bits (99), Expect = 3e-04
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 13 IYKYTDRVLAYVAPEILEGKPFDSSVDVWSLGVIMIEIDTHGQLYPKLTE 162
IY+Y Y +PE+L G P+D ++D+WSLG I++E+ T L+ E
Sbjct: 318 IYQYIQSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 366
>sp|Q61214|DYR1A_MOUSE Dual specificity tyrosine-phosphorylation regulated kinase 1A
(Protein kinase minibrain homolog) (MNBH) (MP86) (Dual
specificity YAK1-related kinase)
Length = 763
Score = 42.7 bits (99), Expect = 3e-04
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 13 IYKYTDRVLAYVAPEILEGKPFDSSVDVWSLGVIMIEIDTHGQLYPKLTE 162
IY+Y Y +PE+L G P+D ++D+WSLG I++E+ T L+ E
Sbjct: 318 IYQYIQSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 366
>sp|Q63470|DYR1A_RAT Dual specificity tyrosine-phosphorylation regulated kinase 1A
(Protein kinase minibrain homolog) (MNBH) (RP86) (Dual
specificity YAK1-related kinase)
Length = 763
Score = 42.7 bits (99), Expect = 3e-04
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 13 IYKYTDRVLAYVAPEILEGKPFDSSVDVWSLGVIMIEIDTHGQLYPKLTE 162
IY+Y Y +PE+L G P+D ++D+WSLG I++E+ T L+ E
Sbjct: 318 IYQYIQSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 366
>sp|Q9Y463|DYR1B_HUMAN Dual specificity tyrosine-phosphorylation regulated kinase 1B (Mirk
protein kinase) (Minibrain-related kinase)
Length = 629
Score = 42.4 bits (98), Expect = 3e-04
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +1
Query: 13 IYKYTDRVLAYVAPEILEGKPFDSSVDVWSLGVIMIEIDTHGQLY 147
IY+Y Y +PE+L G P+D ++D+WSLG I++E+ T L+
Sbjct: 270 IYQYIQSRF-YRSPEVLLGTPYDLAIDMWSLGCILVEMHTGEPLF 313
>sp|Q9Z188|DYR1B_MOUSE Dual specificity tyrosine-phosphorylation regulated kinase 1B
Length = 589
Score = 42.4 bits (98), Expect = 3e-04
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +1
Query: 13 IYKYTDRVLAYVAPEILEGKPFDSSVDVWSLGVIMIEIDTHGQLY 147
IY+Y Y +PE+L G P+D ++D+WSLG I++E+ T L+
Sbjct: 270 IYQYIQSRF-YRSPEVLLGTPYDLAIDMWSLGCILVEMHTGEPLF 313
>sp|Q6C3J2|IPL1_YARLI Spindle assembly checkpoint kinase (Aurora kinase)
Length = 371
Score = 42.4 bits (98), Expect = 3e-04
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +1
Query: 43 YVAPEILEGKPFDSSVDVWSLGVIMIE 123
Y+ PEI++ +P+D +VDVWSLG++M E
Sbjct: 261 YLPPEIVQSRPYDKNVDVWSLGILMYE 287
>sp|Q96NX5|KCC1G_HUMAN Calcium/calmodulin-dependent protein kinase type 1G (CaM kinase IG)
(CaM kinase I gamma) (CaMKI gamma) (CaMKI-gamma) (CaM-KI
gamma) (CaMKIG) (CaMK-like CREB kinase III) (CLICK III)
Length = 476
Score = 41.6 bits (96), Expect = 6e-04
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Frame = +1
Query: 1 DDNGIYKYTDRVLAYVAPEILEGKPFDSSVDVWSLGVIMIEI---------DTHGQLYPK 153
+ NGI YVAPE+L KP+ +VD WS+GVI + +T +L+ K
Sbjct: 171 EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEK 230
Query: 154 LTE 162
+ E
Sbjct: 231 IKE 233
>sp|Q09147|FGFR2_DROME Fibroblast growth factor receptor homolog 2 precursor (Breathless
protein) (dFGF-R1)
Length = 1052
Score = 41.6 bits (96), Expect = 6e-04
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 37 LAYVAPEILEGKPFDSSVDVWSLGVIMIEIDTHG-QLYPKL 156
+ ++APE L+ K +DS DVWS GV++ EI T+G Q YP +
Sbjct: 905 IKWMAPESLQEKKYDSQSDVWSYGVLLWEIMTYGDQPYPHI 945
>sp|Q91VB2|KCC1G_MOUSE Calcium/calmodulin-dependent protein kinase type 1G (CaM kinase IG)
(CaM kinase I gamma) (CaMKI gamma) (CaMKI-gamma) (CaM-KI
gamma) (CaMKIG) (CaMK-like CREB kinase III) (CLICK III)
Length = 477
Score = 41.2 bits (95), Expect = 7e-04
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Frame = +1
Query: 1 DDNGIYKYTDRVLAYVAPEILEGKPFDSSVDVWSLGVIMIEI---------DTHGQLYPK 153
+ NG+ YVAPE+L KP+ +VD WS+GVI + +T +L+ K
Sbjct: 171 EQNGVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEK 230
Query: 154 LTE 162
+ E
Sbjct: 231 IKE 233
>sp|O70150|KCC1B_RAT Calcium/calmodulin-dependent protein kinase type 1B (CaM kinase IB)
(CaM kinase I beta) (CaMKI-beta) (CaM-KI beta)
(Pregnancy up-regulated non-ubiquitously expressed CaM
kinase homolog)
Length = 343
Score = 41.2 bits (95), Expect = 7e-04
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +1
Query: 43 YVAPEILEGKPFDSSVDVWSLGVI 114
YVAPE+LE KP+ +VDVW+LGVI
Sbjct: 178 YVAPELLEQKPYGKAVDVWALGVI 201
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.317 0.141 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,912,376
Number of Sequences: 369166
Number of extensions: 348520
Number of successful extensions: 2351
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2305
length of database: 68,354,980
effective HSP length: 30
effective length of database: 62,812,930
effective search space used: 1695949110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)