Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_O15
(457 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 92 5e-19
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 88 1e-17
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 86 4e-17
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 86 4e-17
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 86 4e-17
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 86 4e-17
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 86 4e-17
sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hs... 83 3e-16
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 79 4e-15
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 79 4e-15
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 92.0 bits (227), Expect = 5e-19
Identities = 42/68 (61%), Positives = 49/68 (72%)
Frame = +2
Query: 2 YAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCN 181
YA+ MK+T+ I++KC+EVIGWLD NQTAEKEEYEHHQKELEKVCN
Sbjct: 545 YAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCN 604
Query: 182 PIMTKFYQ 205
PI+TK YQ
Sbjct: 605 PIITKLYQ 612
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 87.8 bits (216), Expect = 1e-17
Identities = 40/68 (58%), Positives = 48/68 (70%)
Frame = +2
Query: 2 YAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCN 181
YA+ MK+T+ I+DKC+EVIGWLD NQTAE+EE+EH QKELEKVCN
Sbjct: 545 YAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCN 604
Query: 182 PIMTKFYQ 205
PI+TK YQ
Sbjct: 605 PIITKLYQ 612
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 85.9 bits (211), Expect = 4e-17
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +2
Query: 2 YAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCN 181
YA+ MK T+ I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCN
Sbjct: 545 YAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCN 604
Query: 182 PIMTKFYQ 205
PI+TK YQ
Sbjct: 605 PIITKLYQ 612
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 85.9 bits (211), Expect = 4e-17
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +2
Query: 2 YAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCN 181
YA+ MK T+ I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCN
Sbjct: 545 YAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCN 604
Query: 182 PIMTKFYQ 205
PI+TK YQ
Sbjct: 605 PIITKLYQ 612
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 85.9 bits (211), Expect = 4e-17
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +2
Query: 2 YAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCN 181
YA+ MK T+ I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCN
Sbjct: 545 YAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCN 604
Query: 182 PIMTKFYQ 205
PI+TK YQ
Sbjct: 605 PIITKLYQ 612
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 85.9 bits (211), Expect = 4e-17
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +2
Query: 2 YAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCN 181
YA+ MK T+ I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCN
Sbjct: 545 YAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCN 604
Query: 182 PIMTKFYQ 205
PI+TK YQ
Sbjct: 605 PIITKLYQ 612
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 85.9 bits (211), Expect = 4e-17
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = +2
Query: 2 YAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCN 181
YA+ MK+T+ I+DKC+EVI WLD NQTAEK+EYEH QK+LEKVCN
Sbjct: 545 YAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCN 604
Query: 182 PIMTKFYQ 205
PI+TK YQ
Sbjct: 605 PIITKLYQ 612
>sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hsc70.1)
Length = 686
Score = 83.2 bits (204), Expect = 3e-16
Identities = 38/68 (55%), Positives = 46/68 (67%)
Frame = +2
Query: 2 YAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCN 181
YA+ MK+T+ I+DKC+EVI WLD NQTAE++EY H QKELEKVCN
Sbjct: 543 YAFNMKSTVEDEKLAGKISDEDKQKILDKCNEVISWLDKNQTAERDEYVHQQKELEKVCN 602
Query: 182 PIMTKFYQ 205
PI+TK YQ
Sbjct: 603 PIITKLYQ 610
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 79.3 bits (194), Expect = 4e-15
Identities = 36/68 (52%), Positives = 43/68 (63%)
Frame = +2
Query: 2 YAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCN 181
Y Y +K T+ I+DKC EVI WLD NQ AEK+EYEH QKELE+VCN
Sbjct: 548 YTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCN 607
Query: 182 PIMTKFYQ 205
PI++K YQ
Sbjct: 608 PIISKLYQ 615
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 79.3 bits (194), Expect = 4e-15
Identities = 36/68 (52%), Positives = 43/68 (63%)
Frame = +2
Query: 2 YAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCN 181
Y Y MK T+ II KC+E + W+D NQTAEK++YEH QKELEKVCN
Sbjct: 552 YCYNMKQTVEDEKVKGKISEEDKKTIIKKCNETVEWVDKNQTAEKDQYEHKQKELEKVCN 611
Query: 182 PIMTKFYQ 205
PI+TK YQ
Sbjct: 612 PIITKLYQ 619
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,159,034
Number of Sequences: 369166
Number of extensions: 680640
Number of successful extensions: 2006
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2006
length of database: 68,354,980
effective HSP length: 101
effective length of database: 49,696,745
effective search space used: 2484837250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)