Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_N17
(786 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP... 379 e-105
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 365 e-101
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 365 e-101
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 360 3e-99
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 359 4e-99
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 359 4e-99
sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP... 358 9e-99
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 357 3e-98
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 352 7e-97
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 347 2e-95
>sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 619
Score = 379 bits (972), Expect = e-105
Identities = 180/262 (68%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Frame = +3
Query: 3 MGGRMMYIIPFSMGPIGSPLSKIGIQLTDSNYVVLSMRVMTRVSPLVWHYLGDKAFVKCV 182
M GR+MY+IPFSMGP+G PLSKIG+QLTDSNYVVLSMR+MTRV VW LGD FV+C+
Sbjct: 129 MAGRIMYVIPFSMGPVGGPLSKIGVQLTDSNYVVLSMRIMTRVGHEVWDALGDNDFVRCI 188
Query: 183 HSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFALRIAGR 362
HSVG PRP ++VINHWPCNPE+ LIAH P ER KK ALRIA
Sbjct: 189 HSVGLPRPVKQRVINHWPCNPERVLIAHRPAEREIWSFGSGYGGNSLLGKKMLALRIASN 248
Query: 363 IAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVVGDDIA 542
IA DEGWMAEHMLIM VT P G+E FIAAAFPSACGKTN+AMLEP+LPGWKV+ VGDDIA
Sbjct: 249 IAKDEGWMAEHMLIMGVTRPDGKEHFIAAAFPSACGKTNLAMLEPALPGWKVRCVGDDIA 308
Query: 543 WMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGL 722
WM+F E G L AINPE GFFGVAPGT+ KTNP A+ TFQKNSIFTNV ET++G Y+WEGL
Sbjct: 309 WMKFGEDGRLYAINPEYGFFGVAPGTSKKTNPMAVATFQKNSIFTNVGETANGEYFWEGL 368
Query: 723 EDEV-DKNLEITSWLGVKMKVG 785
EDE+ DKN+++ +WLG K ++G
Sbjct: 369 EDEIKDKNVDMINWLGEKWRIG 390
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 365 bits (938), Expect = e-101
Identities = 169/253 (66%), Positives = 201/253 (79%)
Frame = +3
Query: 3 MGGRMMYIIPFSMGPIGSPLSKIGIQLTDSNYVVLSMRVMTRVSPLVWHYLGDKAFVKCV 182
M GR MY+IPFSMGP+GSPLSKIGI+LTDS YVV SMR+MTR+ V LGD FVKC+
Sbjct: 134 MKGRTMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEALGDGEFVKCL 193
Query: 183 HSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFALRIAGR 362
HSVGCP P + ++N+WPCNPE TLIAHLPD R KKCFALR+A R
Sbjct: 194 HSVGCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASR 253
Query: 363 IAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVVGDDIA 542
+A +EGW+AEHMLI+ +TNP+GE+K++AAAFPSACGKTN+AM+ PSLPGWKV+ VGDDIA
Sbjct: 254 LAKEEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIA 313
Query: 543 WMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGL 722
WM+FD G LRAINPE GFFGVAPGT+ KTNPNA+KT QKN+IFTNVAETSDG YWEG+
Sbjct: 314 WMKFDAQGHLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI 373
Query: 723 EDEVDKNLEITSW 761
++ + + ITSW
Sbjct: 374 DEPLASGVTITSW 386
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 365 bits (938), Expect = e-101
Identities = 169/253 (66%), Positives = 201/253 (79%)
Frame = +3
Query: 3 MGGRMMYIIPFSMGPIGSPLSKIGIQLTDSNYVVLSMRVMTRVSPLVWHYLGDKAFVKCV 182
M GR MY+IPFSMGP+GSPLSKIGI+LTDS YVV SMR+MTR+ V LGD FVKC+
Sbjct: 134 MKGRTMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEALGDGEFVKCL 193
Query: 183 HSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFALRIAGR 362
HSVGCP P + ++N+WPCNPE TLIAHLPD R KKCFALR+A R
Sbjct: 194 HSVGCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASR 253
Query: 363 IAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVVGDDIA 542
+A +EGW+AEHMLI+ +TNP+GE+K++AAAFPSACGKTN+AM+ PSLPGWKV+ VGDDIA
Sbjct: 254 LAKEEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIA 313
Query: 543 WMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGL 722
WM+FD G LRAINPE GFFGVAPGT+ KTNPNA+KT QKN+IFTNVAETSDG YWEG+
Sbjct: 314 WMKFDAQGHLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI 373
Query: 723 EDEVDKNLEITSW 761
++ + + ITSW
Sbjct: 374 DEPLASGVTITSW 386
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 360 bits (923), Expect = 3e-99
Identities = 166/253 (65%), Positives = 200/253 (79%)
Frame = +3
Query: 3 MGGRMMYIIPFSMGPIGSPLSKIGIQLTDSNYVVLSMRVMTRVSPLVWHYLGDKAFVKCV 182
M GR MY+IPFSMGP+GSPL+KIGI+LTDS YVV SMR+MTR+ V LGD F+KC+
Sbjct: 134 MKGRTMYVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGISVLEALGDGEFIKCL 193
Query: 183 HSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFALRIAGR 362
HSVGCP P + ++N+W CNPE TLIAHLPD R KKCFALRIA R
Sbjct: 194 HSVGCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASR 253
Query: 363 IAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVVGDDIA 542
+A +EGW+AEHMLI+ +TNP+G++K++AAAFPSACGKTN+AM+ PSLPGWKV+ VGDDIA
Sbjct: 254 LAKEEGWLAEHMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIA 313
Query: 543 WMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGL 722
WM+FD G LRAINPE GFFGVAPGT+ KTNPNA+KT QKN+IFTNVAETSDG YWEG+
Sbjct: 314 WMKFDAQGNLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI 373
Query: 723 EDEVDKNLEITSW 761
++ + + ITSW
Sbjct: 374 DEPLAPGVTITSW 386
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 359 bits (922), Expect = 4e-99
Identities = 165/253 (65%), Positives = 200/253 (79%)
Frame = +3
Query: 3 MGGRMMYIIPFSMGPIGSPLSKIGIQLTDSNYVVLSMRVMTRVSPLVWHYLGDKAFVKCV 182
M GR MY+IPFSMGP+GSPL+KIGI+LTDS YVV SMR+MTR+ V LGD F+KC+
Sbjct: 134 MKGRTMYVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGTSVLEALGDGEFIKCL 193
Query: 183 HSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFALRIAGR 362
HSVGCP P + ++N+W CNPE TLIAHLPD R KKCFALRIA R
Sbjct: 194 HSVGCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASR 253
Query: 363 IAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVVGDDIA 542
+A +EGW+AEHMLI+ +TNP+G++K++AAAFPSACGKTN+AM+ P+LPGWKV+ VGDDIA
Sbjct: 254 LAKEEGWLAEHMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPTLPGWKVECVGDDIA 313
Query: 543 WMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGL 722
WM+FD G LRAINPE GFFGVAPGT+ KTNPNA+KT QKN+IFTNVAETSDG YWEG+
Sbjct: 314 WMKFDAQGNLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI 373
Query: 723 EDEVDKNLEITSW 761
++ + + ITSW
Sbjct: 374 DEPLAPGVTITSW 386
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 359 bits (922), Expect = 4e-99
Identities = 165/255 (64%), Positives = 200/255 (78%)
Frame = +3
Query: 3 MGGRMMYIIPFSMGPIGSPLSKIGIQLTDSNYVVLSMRVMTRVSPLVWHYLGDKAFVKCV 182
M GR MY+IPFSMGP+GSPLSKIGI+LTDS YVV SMR+MTR+ V LGD FVKC+
Sbjct: 134 MKGRTMYVIPFSMGPLGSPLSKIGIELTDSPYVVTSMRIMTRMGTSVLEALGDGEFVKCL 193
Query: 183 HSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFALRIAGR 362
HSVGCP P + ++N+W CNPE TLIAHLPD R KKCFALR+A R
Sbjct: 194 HSVGCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASR 253
Query: 363 IAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVVGDDIA 542
+A +EGW+AEHMLI+ +TNPKG++K+ AAAFPSACGKTN+AM+ P+LPGWKV+ VGDDIA
Sbjct: 254 LAKEEGWLAEHMLILGITNPKGQKKYFAAAFPSACGKTNLAMMNPTLPGWKVECVGDDIA 313
Query: 543 WMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGL 722
WM+FD+ G LRAINPE GFFGVAPGT+ +TNPNA+KT QKN+IFTNVAETSDG YWEG+
Sbjct: 314 WMKFDQQGNLRAINPENGFFGVAPGTSVRTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI 373
Query: 723 EDEVDKNLEITSWLG 767
+ + +++ SW G
Sbjct: 374 DQPLAARVKLISWKG 388
>sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 643
Score = 358 bits (919), Expect = 9e-99
Identities = 172/264 (65%), Positives = 204/264 (77%), Gaps = 3/264 (1%)
Frame = +3
Query: 3 MGGRMMYIIPFSMGPIGSPLSKIGIQLTDSNYVVLSMRVMTRVSPLVWHYLGDK--AFVK 176
M GR MY+IP+SMGP+G PLSKIGI+LTDS+YVVL MR+MTR+ V L FV+
Sbjct: 150 MAGRTMYVIPYSMGPVGGPLSKIGIELTDSDYVVLCMRIMTRMGEPVLKALAKNNGEFVR 209
Query: 177 CVHSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFALRIA 356
CVHSVG P+P KVINHWPCNPEKT+IAH P ER KKCFALRIA
Sbjct: 210 CVHSVGQPKPVATKVINHWPCNPEKTIIAHRPAEREIWSFGSGYGGNSLLGKKCFALRIA 269
Query: 357 GRIAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVVGDD 536
I YDEGWMAEHMLIM VT+PKGEE+F+AAAFPSACGKTN+AMLEP++PGWKV+V+GDD
Sbjct: 270 MNIGYDEGWMAEHMLIMGVTSPKGEERFVAAAFPSACGKTNLAMLEPTIPGWKVRVIGDD 329
Query: 537 IAWMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWE 716
IAWM+F G L AINPE GFFGVAPGT++KTNP AM +FQ+N+IFTNVAET+DG Y+WE
Sbjct: 330 IAWMKFGADGRLYAINPEYGFFGVAPGTSHKTNPMAMASFQENTIFTNVAETADGEYFWE 389
Query: 717 GLEDEV-DKNLEITSWLGVKMKVG 785
GLE EV + +++ +WLG +G
Sbjct: 390 GLEHEVKNPKVDMINWLGEPWHIG 413
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 357 bits (915), Expect = 3e-98
Identities = 167/253 (66%), Positives = 197/253 (77%)
Frame = +3
Query: 3 MGGRMMYIIPFSMGPIGSPLSKIGIQLTDSNYVVLSMRVMTRVSPLVWHYLGDKAFVKCV 182
M GR MY+IPFSMGPIGSPL+KIGI+LTDS YVV SMR+MTR+ LG+ FVKC+
Sbjct: 134 MQGRTMYVIPFSMGPIGSPLAKIGIELTDSPYVVASMRMMTRMGTAALKALGNGEFVKCL 193
Query: 183 HSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFALRIAGR 362
HSVGCP P +IN+WPCNPE TLIAHLPD R KKCFALRIA R
Sbjct: 194 HSVGCPLPLKEPLINNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASR 253
Query: 363 IAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVVGDDIA 542
IA +EGW+AEHMLI+ +TNP+GE+K+ AAAFPSACGKTN+AM+ PS PGWK++ VGDDIA
Sbjct: 254 IAKEEGWLAEHMLILGITNPEGEKKYFAAAFPSACGKTNLAMMNPSRPGWKIECVGDDIA 313
Query: 543 WMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGL 722
WM+FDE G LRAINPE GFFGVAPGT+ KTNPNA+KT KN+IFTNVAETSDG YWEG+
Sbjct: 314 WMKFDELGNLRAINPENGFFGVAPGTSIKTNPNAIKTIFKNTIFTNVAETSDGGVYWEGI 373
Query: 723 EDEVDKNLEITSW 761
++ + + +TSW
Sbjct: 374 DEPLPPGVTLTSW 386
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 352 bits (903), Expect = 7e-97
Identities = 163/261 (62%), Positives = 197/261 (75%)
Frame = +3
Query: 3 MGGRMMYIIPFSMGPIGSPLSKIGIQLTDSNYVVLSMRVMTRVSPLVWHYLGDKAFVKCV 182
M GR+MY++PFSMGP+GSPLS+IG+QLTDS YVV SMR+MTR+ V LGD F+KC+
Sbjct: 152 MQGRIMYVLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDGDFIKCL 211
Query: 183 HSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFALRIAGR 362
HSVG P + WPCNPEKTLI H+PD+R KKCFALRIA R
Sbjct: 212 HSVGQPLTGHGDPVGQWPCNPEKTLIGHVPDQREIVSFGSGYGGNSLLGKKCFALRIASR 271
Query: 363 IAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVVGDDIA 542
+A DEGW+AEHMLI+ +TNP G+++++AAAFPSACGKTN+AM+ P+LPGWKV+ VGDDIA
Sbjct: 272 LARDEGWLAEHMLILGITNPAGKKRYVAAAFPSACGKTNLAMMRPALPGWKVECVGDDIA 331
Query: 543 WMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGL 722
WMRFD G+LRAINPE GFFGVAPGT+ TNPNAM T Q N++FTNVAETSDG YWEG+
Sbjct: 332 WMRFDSEGQLRAINPENGFFGVAPGTSAATNPNAMATIQSNTLFTNVAETSDGGVYWEGI 391
Query: 723 EDEVDKNLEITSWLGVKMKVG 785
+ + + ITSWLG K G
Sbjct: 392 DQPLPPGVTITSWLGKPWKPG 412
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 347 bits (890), Expect = 2e-95
Identities = 163/261 (62%), Positives = 194/261 (74%)
Frame = +3
Query: 3 MGGRMMYIIPFSMGPIGSPLSKIGIQLTDSNYVVLSMRVMTRVSPLVWHYLGDKAFVKCV 182
M GR MY++PFSMGP+GSPLS+IG+QLTDS YVV SMR+MTR+ V LGD FVKC+
Sbjct: 152 MQGRTMYVLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDGDFVKCL 211
Query: 183 HSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFALRIAGR 362
HSVG P + ++ WPCNPEKTLI H+PD+R KKCFALRIA R
Sbjct: 212 HSVGQPLTGQGEPVSQWPCNPEKTLIGHVPDQREIISFGSGYGGNSLLGKKCFALRIASR 271
Query: 363 IAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVVGDDIA 542
+A DEGW+AEHMLI+ +T+P G++ AAAFPSACGKTN+AM+ P+LPGWKV+ VGDDIA
Sbjct: 272 LARDEGWLAEHMLILGITSPAGKKALCAAAFPSACGKTNLAMMRPALPGWKVECVGDDIA 331
Query: 543 WMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGL 722
WMRFD G LRAINPE GFFGVAPGT+ TNPNAM T Q N+IFTNVAETSDG YWEG+
Sbjct: 332 WMRFDSEGRLRAINPENGFFGVAPGTSATTNPNAMATIQSNTIFTNVAETSDGGVYWEGI 391
Query: 723 EDEVDKNLEITSWLGVKMKVG 785
+ + + +TSWLG K G
Sbjct: 392 DQPLPPGVTVTSWLGKPWKPG 412
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,410,702
Number of Sequences: 369166
Number of extensions: 2107336
Number of successful extensions: 5121
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4987
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7405750800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)