Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_N07
(821 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 404 e-112
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 404 e-112
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 402 e-112
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 397 e-110
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 395 e-110
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 388 e-108
sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP... 387 e-107
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 383 e-106
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 382 e-106
sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP... 372 e-103
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 404 bits (1038), Expect = e-112
Identities = 192/273 (70%), Positives = 219/273 (80%)
Frame = +2
Query: 2 SPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAH 181
SPYVV SM+IMTRMG VLE++ D FVK LHSVG PLP ++ ++N WPCNPE TLIAH
Sbjct: 163 SPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSVGCPLPLQKPLVNNWPCNPELTLIAH 221
Query: 182 IPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYIT 361
+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T P GEK Y+
Sbjct: 222 LPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAEHMLILGITNPEGEKKYLA 281
Query: 362 AAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSH 541
AAFPSACGKTNLAM+ P++PG+KVECVGDDIAWMKFD++G LRAINPE GFFGVAPGTS
Sbjct: 282 AAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHLRAINPENGFFGVAPGTSV 341
Query: 542 STNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKNCGRVAA 721
TNPNA+K IQ+NTIFTNVAETSDGG YWEG+ DE + I W+ K W+ G A
Sbjct: 342 KTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DEPLASGVTITSWKNKEWSSEDGEPCA 400
Query: 722 HPNSRFCCPASQCPIIDKNWESPNGVPISAVIF 820
HPNSRFC PASQCPIID WESP GVPI +IF
Sbjct: 401 HPNSRFCTPASQCPIIDAAWESPEGVPIEGIIF 433
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 404 bits (1037), Expect = e-112
Identities = 192/273 (70%), Positives = 219/273 (80%)
Frame = +2
Query: 2 SPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAH 181
SPYVV SM+IMTRMG VLE++ D FVK LHSVG PLP ++ ++N WPCNPE TLIAH
Sbjct: 163 SPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSVGCPLPLQKPLVNNWPCNPELTLIAH 221
Query: 182 IPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYIT 361
+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T P GEK Y+
Sbjct: 222 LPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAEHMLILGITNPEGEKKYLA 281
Query: 362 AAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSH 541
AAFPSACGKTNLAM+ P++PG+KVECVGDDIAWMKFD++G LRAINPE GFFGVAPGTS
Sbjct: 282 AAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHLRAINPENGFFGVAPGTSV 341
Query: 542 STNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKNCGRVAA 721
TNPNA+K IQ+NTIFTNVAETSDGG YWEG+ DE + I W+ K W+ G A
Sbjct: 342 KTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DEPLASGVTITSWKNKEWSPEDGEPCA 400
Query: 722 HPNSRFCCPASQCPIIDKNWESPNGVPISAVIF 820
HPNSRFC PASQCPIID WESP GVPI +IF
Sbjct: 401 HPNSRFCTPASQCPIIDAAWESPEGVPIEGIIF 433
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 402 bits (1034), Expect = e-112
Identities = 191/273 (69%), Positives = 220/273 (80%)
Frame = +2
Query: 2 SPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAH 181
SPYVV SM+IMTRMG VLE++ D FVK LHSVG PLP ++ ++N W CNPE TLIAH
Sbjct: 163 SPYVVTSMRIMTRMGTSVLEALGDGE-FVKCLHSVGCPLPLKKPLVNNWACNPELTLIAH 221
Query: 182 IPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYIT 361
+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T P G+K Y
Sbjct: 222 LPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAEHMLILGITNPKGQKKYFA 281
Query: 362 AAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSH 541
AAFPSACGKTNLAM+ PT+PG+KVECVGDDIAWMKFD +G+LRAINPE GFFGVAPGTS
Sbjct: 282 AAFPSACGKTNLAMMNPTLPGWKVECVGDDIAWMKFDQQGNLRAINPENGFFGVAPGTSV 341
Query: 542 STNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKNCGRVAA 721
TNPNA+K IQ+NTIFTNVAETSDGG YWEG+ D+ +++I W+GK W G A
Sbjct: 342 RTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DQPLAARVKLISWKGKEWDPKDGEPCA 400
Query: 722 HPNSRFCCPASQCPIIDKNWESPNGVPISAVIF 820
HPNSRFC PASQCPIID +WESP GVPI +IF
Sbjct: 401 HPNSRFCTPASQCPIIDPDWESPEGVPIEGIIF 433
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 397 bits (1019), Expect = e-110
Identities = 189/273 (69%), Positives = 217/273 (79%)
Frame = +2
Query: 2 SPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAH 181
SPYVV SM+IMTRMG VLE++ D F+K LHSVG PLP ++ ++N W CNPE TLIAH
Sbjct: 163 SPYVVASMRIMTRMGTSVLEALGDGE-FIKCLHSVGCPLPLKKPLVNNWACNPELTLIAH 221
Query: 182 IPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYIT 361
+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T P G+K Y+
Sbjct: 222 LPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEEGWLAEHMLILGITNPEGKKKYLA 281
Query: 362 AAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSH 541
AAFPSACGKTNLAM+ PT+PG+KVECVGDDIAWMKFD++G+LRAINPE GFFGVAPGTS
Sbjct: 282 AAFPSACGKTNLAMMNPTLPGWKVECVGDDIAWMKFDAQGNLRAINPENGFFGVAPGTSV 341
Query: 542 STNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKNCGRVAA 721
TNPNA+K IQ+NTIFTNVAETSDGG YWEG+ DE + I W+ K W A
Sbjct: 342 KTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DEPLAPGVTITSWKNKEWRPQDEEPCA 400
Query: 722 HPNSRFCCPASQCPIIDKNWESPNGVPISAVIF 820
HPNSRFC PASQCPIID WESP GVPI +IF
Sbjct: 401 HPNSRFCTPASQCPIIDPAWESPEGVPIEGIIF 433
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 395 bits (1016), Expect = e-110
Identities = 188/273 (68%), Positives = 217/273 (79%)
Frame = +2
Query: 2 SPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAH 181
SPYVV SM+IMTRMG VLE++ D F+K LHSVG PLP ++ ++N W CNPE TLIAH
Sbjct: 163 SPYVVASMRIMTRMGISVLEALGDGE-FIKCLHSVGCPLPLKKPLVNNWACNPELTLIAH 221
Query: 182 IPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYIT 361
+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T P G+K Y+
Sbjct: 222 LPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEEGWLAEHMLILGITNPEGKKKYLA 281
Query: 362 AAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSH 541
AAFPSACGKTNLAM+ P++PG+KVECVGDDIAWMKFD++G+LRAINPE GFFGVAPGTS
Sbjct: 282 AAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGNLRAINPENGFFGVAPGTSV 341
Query: 542 STNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKNCGRVAA 721
TNPNA+K IQ+NTIFTNVAETSDGG YWEG+ DE + I W+ K W A
Sbjct: 342 KTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DEPLAPGVTITSWKNKEWRPQDAEPCA 400
Query: 722 HPNSRFCCPASQCPIIDKNWESPNGVPISAVIF 820
HPNSRFC PASQCPIID WESP GVPI +IF
Sbjct: 401 HPNSRFCTPASQCPIIDPAWESPEGVPIEGIIF 433
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 388 bits (997), Expect = e-108
Identities = 183/273 (67%), Positives = 215/273 (78%)
Frame = +2
Query: 2 SPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAH 181
SPYVV SM++MTRMG L+++ + FVK LHSVG PLP + +IN WPCNPE TLIAH
Sbjct: 163 SPYVVASMRMMTRMGTAALKALGNGE-FVKCLHSVGCPLPLKEPLINNWPCNPELTLIAH 221
Query: 182 IPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYIT 361
+P + EI SFGSGYGGNSLLGKKCFALR+ S +A++E W AEHMLILG+T P GEK Y
Sbjct: 222 LPDRREIISFGSGYGGNSLLGKKCFALRIASRIAKEEGWLAEHMLILGITNPEGEKKYFA 281
Query: 362 AAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSH 541
AAFPSACGKTNLAM+ P+ PG+K+ECVGDDIAWMKFD G+LRAINPE GFFGVAPGTS
Sbjct: 282 AAFPSACGKTNLAMMNPSRPGWKIECVGDDIAWMKFDELGNLRAINPENGFFGVAPGTSI 341
Query: 542 STNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKNCGRVAA 721
TNPNA+K I +NTIFTNVAETSDGG YWEG+++ + + + W+ K WT + G A
Sbjct: 342 KTNPNAIKTIFKNTIFTNVAETSDGGVYWEGIDEPLP-PGVTLTSWKNKDWTPDNGEPCA 400
Query: 722 HPNSRFCCPASQCPIIDKNWESPNGVPISAVIF 820
HPNSRFC PASQCPI+D WESP GVPI +IF
Sbjct: 401 HPNSRFCTPASQCPIMDPAWESPEGVPIEGIIF 433
>sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 647
Score = 387 bits (993), Expect = e-107
Identities = 185/273 (67%), Positives = 216/273 (79%)
Frame = +2
Query: 2 SPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAH 181
S YVV SM+IMTRMG VL + FV+ALHSVG P + + WPC+PE+T+I H
Sbjct: 189 SAYVVASMRIMTRMGAAVLRQLAKKEEFVRALHSVGAPANGQVEQPS-WPCDPERTIILH 247
Query: 182 IPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYIT 361
PA+N I S+GSGYGGNSLLGKKCFALR+GS +A+ E W AEHMLILG+T P GEK YIT
Sbjct: 248 KPAENLIVSYGSGYGGNSLLGKKCFALRIGSTIAKQEGWLAEHMLILGITDPKGEKKYIT 307
Query: 362 AAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSH 541
AAFPSACGKTNLAM+ P++ YKVECVGDDIAWMKFDS+G LRAINPE GFFGVAPGTS
Sbjct: 308 AAFPSACGKTNLAMLNPSLANYKVECVGDDIAWMKFDSQGVLRAINPENGFFGVAPGTSM 367
Query: 542 STNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKNCGRVAA 721
TNP AM + +NTIFTNVA TSDGG +WEG+E + N++I DW GKPWTK+ G+ AA
Sbjct: 368 ETNPIAMNTVFKNTIFTNVASTSDGGVFWEGMESSL-APNVQITDWLGKPWTKDSGKPAA 426
Query: 722 HPNSRFCCPASQCPIIDKNWESPNGVPISAVIF 820
HPNSRFC PA+QCPIID+ WE P GVPISA++F
Sbjct: 427 HPNSRFCTPAAQCPIIDEAWEDPAGVPISAMLF 459
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 383 bits (984), Expect = e-106
Identities = 183/273 (67%), Positives = 210/273 (76%)
Frame = +2
Query: 2 SPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAH 181
S YVV SM+IMTR+G VL+++ D F+K LHSVG PL + WPCNPEKTLI H
Sbjct: 181 SAYVVASMRIMTRLGTPVLQALGDGD-FIKCLHSVGQPLTGHGDPVGQWPCNPEKTLIGH 239
Query: 182 IPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYIT 361
+P + EI SFGSGYGGNSLLGKKCFALR+ S LARDE W AEHMLILG+T P G+K Y+
Sbjct: 240 VPDQREIVSFGSGYGGNSLLGKKCFALRIASRLARDEGWLAEHMLILGITNPAGKKRYVA 299
Query: 362 AAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSH 541
AAFPSACGKTNLAM+ P +PG+KVECVGDDIAWM+FDS+G LRAINPE GFFGVAPGTS
Sbjct: 300 AAFPSACGKTNLAMMRPALPGWKVECVGDDIAWMRFDSEGQLRAINPENGFFGVAPGTSA 359
Query: 542 STNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKNCGRVAA 721
+TNPNAM IQ NT+FTNVAETSDGG YWEG++ + + I W GKPW A
Sbjct: 360 ATNPNAMATIQSNTLFTNVAETSDGGVYWEGIDQPLP-PGVTITSWLGKPWKPGDKEPCA 418
Query: 722 HPNSRFCCPASQCPIIDKNWESPNGVPISAVIF 820
HPNSRFC PA QCPI+D WE+P GVPI A+IF
Sbjct: 419 HPNSRFCVPARQCPIMDPAWEAPEGVPIDAIIF 451
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 382 bits (981), Expect = e-106
Identities = 183/273 (67%), Positives = 210/273 (76%)
Frame = +2
Query: 2 SPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAH 181
S YVV SM+IMTR+G VL+++ D FVK LHSVG PL + ++ WPCNPEKTLI H
Sbjct: 181 SAYVVASMRIMTRLGTPVLQALGDGD-FVKCLHSVGQPLTGQGEPVSQWPCNPEKTLIGH 239
Query: 182 IPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYIT 361
+P + EI SFGSGYGGNSLLGKKCFALR+ S LARDE W AEHMLILG+T P G+K
Sbjct: 240 VPDQREIISFGSGYGGNSLLGKKCFALRIASRLARDEGWLAEHMLILGITSPAGKKALCA 299
Query: 362 AAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSH 541
AAFPSACGKTNLAM+ P +PG+KVECVGDDIAWM+FDS+G LRAINPE GFFGVAPGTS
Sbjct: 300 AAFPSACGKTNLAMMRPALPGWKVECVGDDIAWMRFDSEGRLRAINPENGFFGVAPGTSA 359
Query: 542 STNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKNCGRVAA 721
+TNPNAM IQ NTIFTNVAETSDGG YWEG++ + + + W GKPW A
Sbjct: 360 TTNPNAMATIQSNTIFTNVAETSDGGVYWEGIDQPLP-PGVTVTSWLGKPWKPGDKEPCA 418
Query: 722 HPNSRFCCPASQCPIIDKNWESPNGVPISAVIF 820
HPNSRFC PA QCPI+D WE+P GVPI A+IF
Sbjct: 419 HPNSRFCAPARQCPIMDPAWEAPEGVPIDAIIF 451
>sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 643
Score = 372 bits (956), Expect = e-103
Identities = 177/274 (64%), Positives = 207/274 (75%), Gaps = 1/274 (0%)
Frame = +2
Query: 2 SPYVVCSMKIMTRMGHKVLESMTDST-PFVKALHSVGVPLPTERHIINGWPCNPEKTLIA 178
S YVV M+IMTRMG VL+++ + FV+ +HSVG P P +IN WPCNPEKT+IA
Sbjct: 179 SDYVVLCMRIMTRMGEPVLKALAKNNGEFVRCVHSVGQPKPVATKVINHWPCNPEKTIIA 238
Query: 179 HIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYI 358
H PA+ EI SFGSGYGGNSLLGKKCFALR+ + DE W AEHMLI+G+T P GE+ ++
Sbjct: 239 HRPAEREIWSFGSGYGGNSLLGKKCFALRIAMNIGYDEGWMAEHMLIMGVTSPKGEERFV 298
Query: 359 TAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTS 538
AAFPSACGKTNLAM+EPTIPG+KV +GDDIAWMKF + G L AINPE GFFGVAPGTS
Sbjct: 299 AAAFPSACGKTNLAMLEPTIPGWKVRVIGDDIAWMKFGADGRLYAINPEYGFFGVAPGTS 358
Query: 539 HSTNPNAMKCIQRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKNCGRVA 718
H TNP AM Q NTIFTNVAET+DG Y+WEGLE EV +++I+W G+PW A
Sbjct: 359 HKTNPMAMASFQENTIFTNVAETADGEYFWEGLEHEVKNPKVDMINWLGEPWHIGDESKA 418
Query: 719 AHPNSRFCCPASQCPIIDKNWESPNGVPISAVIF 820
AHPNSRF PA QCPII +WE P GVPI A+IF
Sbjct: 419 AHPNSRFTAPAGQCPIIHPDWEKPEGVPIDAIIF 452
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,339,252
Number of Sequences: 369166
Number of extensions: 2388665
Number of successful extensions: 6253
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6107
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7907893860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)