Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_N06
(877 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P38646|GRP75_HUMAN Stress-70 protein, mitochondrial prec... 408 e-113
sp|P38647|GRP75_MOUSE Stress-70 protein, mitochondrial prec... 408 e-113
sp|O35501|GRP75_CRIGR Stress-70 protein, mitochondrial prec... 407 e-113
sp|P48721|GRP75_RAT Stress-70 protein, mitochondrial precur... 406 e-113
sp|P29845|HSP7E_DROME Heat shock 70 kDa protein cognate 5 404 e-112
sp|P11141|HSP7F_CAEEL Heat shock 70 kDa protein F, mitochon... 404 e-112
sp|Q8YE76|DNAK_BRUME Chaperone protein dnaK (Heat shock pro... 362 e-100
sp|Q98DD1|DNAK_RHILO Chaperone protein dnaK (Heat shock pro... 362 e-100
sp|Q8FXX2|DNAK_BRUSU Chaperone protein dnaK (Heat shock pro... 361 1e-99
sp|P94317|DNAK_BRAJA Chaperone protein dnaK (Heat shock pro... 361 1e-99
>sp|P38646|GRP75_HUMAN Stress-70 protein, mitochondrial precursor (75 kDa glucose regulated
protein) (GRP 75) (Peptide-binding protein 74) (PBP74)
(Mortalin) (MOT)
Length = 679
Score = 408 bits (1048), Expect = e-113
Identities = 209/288 (72%), Positives = 242/288 (84%)
Frame = +1
Query: 13 KEVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSKLEQLVEHLIKRTIEP 192
+ VREAAEKAK ELSS++QTDINLPYLTMD++GPKHL++KLTR++ E +V LI+RTI P
Sbjct: 306 QRVREAAEKAKCELSSSVQTDINLPYLTMDSSGPKHLNMKLTRAQFEGIVTDLIRRTIAP 365
Query: 193 CEKAIKDAEVKTSDIREVLLVGGMTRMPRVQETVQKLFGRVPSKSVNPDEAVAMGAAIQX 372
C+KA++DAEV SDI EV+LVGGMTRMP+VQ+TVQ LFGR PSK+VNPDEAVA+GAAIQ
Sbjct: 366 CQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFGRAPSKAVNPDEAVAIGAAIQG 425
Query: 373 XXXXXXXXXXXXXXXXXXXXXIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 552
IETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK
Sbjct: 426 GVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 485
Query: 553 VHQGEREMAADNKILGQFSLIGIPPAPRGVPQIEVTFDIDANGIVNVSARDKGTGKEQQI 732
V QGEREMA DNK+LGQF+LIGIPPAPRGVPQIEVTFDIDANGIV+VSA+DKGTG+EQQI
Sbjct: 486 VCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQI 545
Query: 733 VIQSSGGLSKDEIENMIKRAEENAENDKRKREMV*SCKSSRRIVYDTE 876
VIQSSGGLSKD+IENM+K AE+ AE D+RK+E V + + I++DTE
Sbjct: 546 VIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTE 593
>sp|P38647|GRP75_MOUSE Stress-70 protein, mitochondrial precursor (75 kDa glucose regulated
protein) (GRP 75) (Peptide-binding protein 74) (PBP74)
(P66 MOT) (Mortalin)
Length = 679
Score = 408 bits (1048), Expect = e-113
Identities = 210/288 (72%), Positives = 241/288 (83%)
Frame = +1
Query: 13 KEVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSKLEQLVEHLIKRTIEP 192
+ VREAAEKAK ELSS++QTDINLPYLTMD +GPKHL++KLTR++ E +V LIKRTI P
Sbjct: 306 QRVREAAEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKLTRAQFEGIVTDLIKRTIAP 365
Query: 193 CEKAIKDAEVKTSDIREVLLVGGMTRMPRVQETVQKLFGRVPSKSVNPDEAVAMGAAIQX 372
C+KA++DAEV SDI EV+LVGGMTRMP+VQ+TVQ LFGR PSK+VNPDEAVA+GAAIQ
Sbjct: 366 CQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFGRAPSKAVNPDEAVAIGAAIQG 425
Query: 373 XXXXXXXXXXXXXXXXXXXXXIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 552
IETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK
Sbjct: 426 GVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 485
Query: 553 VHQGEREMAADNKILGQFSLIGIPPAPRGVPQIEVTFDIDANGIVNVSARDKGTGKEQQI 732
V QGEREMA DNK+LGQF+LIGIPPAPRGVPQIEVTFDIDANGIV+VSA+DKGTG+EQQI
Sbjct: 486 VCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQI 545
Query: 733 VIQSSGGLSKDEIENMIKRAEENAENDKRKREMV*SCKSSRRIVYDTE 876
VIQSSGGLSKD+IENM+K AE+ AE D+RK+E V + + I++DTE
Sbjct: 546 VIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTE 593
>sp|O35501|GRP75_CRIGR Stress-70 protein, mitochondrial precursor (75 kDa glucose regulated
protein) (GRP 75)
Length = 679
Score = 407 bits (1046), Expect = e-113
Identities = 209/288 (72%), Positives = 241/288 (83%)
Frame = +1
Query: 13 KEVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSKLEQLVEHLIKRTIEP 192
+ VREAAEKAK ELSS++QTDINLPYLTMD +GPKHL++KLTR++ E +V LIKRTI P
Sbjct: 306 QRVREAAEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKLTRAQFEGIVTDLIKRTIAP 365
Query: 193 CEKAIKDAEVKTSDIREVLLVGGMTRMPRVQETVQKLFGRVPSKSVNPDEAVAMGAAIQX 372
C+KA++DAEV SDI EV+LVGGMTRMP+VQ+TVQ LFGR PSK+VNPDEAVA+GAAIQ
Sbjct: 366 CQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFGRAPSKAVNPDEAVAIGAAIQG 425
Query: 373 XXXXXXXXXXXXXXXXXXXXXIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 552
IETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK
Sbjct: 426 GVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 485
Query: 553 VHQGEREMAADNKILGQFSLIGIPPAPRGVPQIEVTFDIDANGIVNVSARDKGTGKEQQI 732
V QGEREMA DNK+LGQF+LIGIPPAPRGVPQIEVTFD+DANGIV+VSA+DKGTG+EQQI
Sbjct: 486 VCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDLDANGIVHVSAKDKGTGREQQI 545
Query: 733 VIQSSGGLSKDEIENMIKRAEENAENDKRKREMV*SCKSSRRIVYDTE 876
VIQSSGGLSKD+IENM+K AE+ AE D+RK+E V + + I++DTE
Sbjct: 546 VIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTE 593
>sp|P48721|GRP75_RAT Stress-70 protein, mitochondrial precursor (75 kDa glucose regulated
protein) (GRP 75) (Peptide-binding protein 74) (PBP74)
(MTHSP70) (Mortalin)
Length = 679
Score = 406 bits (1044), Expect = e-113
Identities = 210/288 (72%), Positives = 240/288 (83%)
Frame = +1
Query: 13 KEVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSKLEQLVEHLIKRTIEP 192
+ VREAAEKAK ELSS++QTDINLPYLTMD +GPKHL++KLTR++ E +V LIKRTI P
Sbjct: 306 QRVREAAEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKLTRAQFEGIVTDLIKRTIAP 365
Query: 193 CEKAIKDAEVKTSDIREVLLVGGMTRMPRVQETVQKLFGRVPSKSVNPDEAVAMGAAIQX 372
C+KA++D EV SDI EV+LVGGMTRMP+VQ+TVQ LFGR PSK+VNPDEAVA+GAAIQ
Sbjct: 366 CQKAMQDREVSKSDIGEVILVGGMTRMPKVQQTVQDLFGRAPSKAVNPDEAVAIGAAIQG 425
Query: 373 XXXXXXXXXXXXXXXXXXXXXIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 552
IETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK
Sbjct: 426 GVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 485
Query: 553 VHQGEREMAADNKILGQFSLIGIPPAPRGVPQIEVTFDIDANGIVNVSARDKGTGKEQQI 732
V QGEREMA DNK+LGQF+LIGIPPAPRGVPQIEVTFDIDANGIV+VSA+DKGTG+EQQI
Sbjct: 486 VCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQI 545
Query: 733 VIQSSGGLSKDEIENMIKRAEENAENDKRKREMV*SCKSSRRIVYDTE 876
VIQSSGGLSKD+IENM+K AE+ AE D+RK+E V + + IV+DTE
Sbjct: 546 VIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIVHDTE 593
>sp|P29845|HSP7E_DROME Heat shock 70 kDa protein cognate 5
Length = 686
Score = 404 bits (1038), Expect = e-112
Identities = 209/288 (72%), Positives = 238/288 (82%)
Frame = +1
Query: 13 KEVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSKLEQLVEHLIKRTIEP 192
+ ++EAAEKAK ELSS+ QTDINLPYLTMD GP+H++LKLTRSKLE LV LIKRTI+P
Sbjct: 306 QRLKEAAEKAKCELSSSQQTDINLPYLTMDAAGPQHMNLKLTRSKLESLVGDLIKRTIQP 365
Query: 193 CEKAIKDAEVKTSDIREVLLVGGMTRMPRVQETVQKLFGRVPSKSVNPDEAVAMGAAIQX 372
C+KA+ DAEV S+I EVLLVGGMTRMP+VQ TVQ+LFGR PS+SVNPDEAVA+GAA+Q
Sbjct: 366 CQKALSDAEVSKSEIGEVLLVGGMTRMPKVQSTVQELFGRQPSRSVNPDEAVAVGAAVQG 425
Query: 373 XXXXXXXXXXXXXXXXXXXXXIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 552
IETLGGVFT+LI+RNTTIPTKKSQVFSTA+DGQTQVEIK
Sbjct: 426 GVLAGDVTDVLLLDVTPLSLGIETLGGVFTRLISRNTTIPTKKSQVFSTASDGQTQVEIK 485
Query: 553 VHQGEREMAADNKILGQFSLIGIPPAPRGVPQIEVTFDIDANGIVNVSARDKGTGKEQQI 732
VHQGEREMA DNK+LG F+L+GIPPAPRGVPQIEV FDIDANGIV+VSA+DKGTGKEQQI
Sbjct: 486 VHQGEREMANDNKLLGSFTLVGIPPAPRGVPQIEVVFDIDANGIVHVSAKDKGTGKEQQI 545
Query: 733 VIQSSGGLSKDEIENMIKRAEENAENDKRKREMV*SCKSSRRIVYDTE 876
VIQSSGGLSKDEIENMIK+AEE A DK+KRE++ IV+DTE
Sbjct: 546 VIQSSGGLSKDEIENMIKKAEEYATADKQKRELIEIVNQGESIVHDTE 593
>sp|P11141|HSP7F_CAEEL Heat shock 70 kDa protein F, mitochondrial precursor
Length = 657
Score = 404 bits (1038), Expect = e-112
Identities = 206/288 (71%), Positives = 237/288 (82%)
Frame = +1
Query: 13 KEVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSKLEQLVEHLIKRTIEP 192
+ +REAAEKAK ELSS QTDINLPY+TMD +GPKHL+LKLTR+K EQ+V LIKRTIEP
Sbjct: 285 QRLREAAEKAKCELSSTTQTDINLPYITMDQSGPKHLNLKLTRAKFEQIVGDLIKRTIEP 344
Query: 193 CEKAIKDAEVKTSDIREVLLVGGMTRMPRVQETVQKLFGRVPSKSVNPDEAVAMGAAIQX 372
C KA+ DAEVK+S I +VLLVGGM+RMP+VQ TVQ++FG+VPSK+VNPDEAVAMGAAIQ
Sbjct: 345 CRKALHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIFGKVPSKAVNPDEAVAMGAAIQG 404
Query: 373 XXXXXXXXXXXXXXXXXXXXXIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 552
IETLGG+ TKLI RNTTIPTKKSQVFSTAADGQTQV+IK
Sbjct: 405 AVLAGDVTDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIK 464
Query: 553 VHQGEREMAADNKILGQFSLIGIPPAPRGVPQIEVTFDIDANGIVNVSARDKGTGKEQQI 732
V QGEREMA NK+LGQFSL+GIPPAPRGVPQ+EVTFDIDANGIVNVSARD+GTGKEQQI
Sbjct: 465 VFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQI 524
Query: 733 VIQSSGGLSKDEIENMIKRAEENAENDKRKREMV*SCKSSRRIVYDTE 876
VIQSSGGLSKD+IENMIK AE+NA D +++E+V + I++DTE
Sbjct: 525 VIQSSGGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAEGIIHDTE 572
>sp|Q8YE76|DNAK_BRUME Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa
protein) (HSP70)
Length = 637
Score = 362 bits (930), Expect = e-100
Identities = 184/288 (63%), Positives = 223/288 (77%)
Frame = +1
Query: 13 KEVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSKLEQLVEHLIKRTIEP 192
+ ++EAAEKAKIELSS+ QT+INLP++T D TGPKHL++KL+R+K E LV+ L++RT+EP
Sbjct: 255 QRLKEAAEKAKIELSSSQQTEINLPFITADQTGPKHLAIKLSRAKFESLVDDLVQRTVEP 314
Query: 193 CEKAIKDAEVKTSDIREVLLVGGMTRMPRVQETVQKLFGRVPSKSVNPDEAVAMGAAIQX 372
C+ A+KDA +K +I EV+LVGGMTRMP++QE V+ FG+ P K VNPDE VAMGAAIQ
Sbjct: 315 CKAALKDAGLKAGEIDEVVLVGGMTRMPKIQEVVKAFFGKEPHKGVNPDEVVAMGAAIQG 374
Query: 373 XXXXXXXXXXXXXXXXXXXXXIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 552
IETLGGVFT+LI RNTTIPTKKSQ FSTA D Q+ V I+
Sbjct: 375 GVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTAEDNQSAVTIR 434
Query: 553 VHQGEREMAADNKILGQFSLIGIPPAPRGVPQIEVTFDIDANGIVNVSARDKGTGKEQQI 732
V QGEREMAADNK+LGQF L+GIPPAPRGVPQIEVTFDIDANGIVNVSA+DKGTGKE QI
Sbjct: 435 VFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQI 494
Query: 733 VIQSSGGLSKDEIENMIKRAEENAENDKRKREMV*SCKSSRRIVYDTE 876
IQ+SGGLS +IE M+K AE NAE DK++RE V + + +V+ TE
Sbjct: 495 RIQASGGLSDADIEKMVKDAEANAEADKKRRESVEAKNQAESLVHSTE 542
>sp|Q98DD1|DNAK_RHILO Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa
protein) (HSP70)
Length = 638
Score = 362 bits (929), Expect = e-100
Identities = 185/288 (64%), Positives = 223/288 (77%)
Frame = +1
Query: 13 KEVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSKLEQLVEHLIKRTIEP 192
+ ++EAAEKAKIELSS QT+INLP++T D TGPKHL+LKLTR+K E LVE L++RTI+P
Sbjct: 255 QRLKEAAEKAKIELSSTTQTEINLPFITADATGPKHLTLKLTRAKFESLVEDLVQRTIDP 314
Query: 193 CEKAIKDAEVKTSDIREVLLVGGMTRMPRVQETVQKLFGRVPSKSVNPDEAVAMGAAIQX 372
C+ A+KDA +K +I EV+LVGGMTRMP++QE V++ FG+ P K VNPDE VA+GAAIQ
Sbjct: 315 CKAALKDAGLKAGEIDEVVLVGGMTRMPKIQEIVKQFFGKEPHKGVNPDEVVALGAAIQA 374
Query: 373 XXXXXXXXXXXXXXXXXXXXXIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 552
IETLGGVFT+LI RNTTIPTKKSQVFSTA D Q+ V I+
Sbjct: 375 GVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQVFSTAEDSQSAVTIR 434
Query: 553 VHQGEREMAADNKILGQFSLIGIPPAPRGVPQIEVTFDIDANGIVNVSARDKGTGKEQQI 732
V QGEREMAADNK LGQF L+GIPPAPRGVPQIEVTFDIDANGIVNVSA+DKGTGKE QI
Sbjct: 435 VFQGEREMAADNKALGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQI 494
Query: 733 VIQSSGGLSKDEIENMIKRAEENAENDKRKREMV*SCKSSRRIVYDTE 876
IQ+SGGLS +IE M+K AE NAE DK++R +V + + +V+ +E
Sbjct: 495 RIQASGGLSDADIEKMVKDAEANAETDKKRRAVVEARNQAEALVHSSE 542
>sp|Q8FXX2|DNAK_BRUSU Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa
protein) (HSP70)
Length = 637
Score = 361 bits (927), Expect = 1e-99
Identities = 183/288 (63%), Positives = 223/288 (77%)
Frame = +1
Query: 13 KEVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSKLEQLVEHLIKRTIEP 192
+ ++EAAEKAKIELSS+ QT+INLP++T D TGPKHL++KL+R+K E LV+ L++RT+EP
Sbjct: 255 QRLKEAAEKAKIELSSSQQTEINLPFITADQTGPKHLAIKLSRAKFESLVDDLVQRTVEP 314
Query: 193 CEKAIKDAEVKTSDIREVLLVGGMTRMPRVQETVQKLFGRVPSKSVNPDEAVAMGAAIQX 372
C+ A+KDA +K +I EV+LVGGMTRMP++QE V+ FG+ P K VNPDE VAMGAAIQ
Sbjct: 315 CKAALKDAGLKAGEIDEVVLVGGMTRMPKIQEVVKAFFGKEPHKGVNPDEVVAMGAAIQG 374
Query: 373 XXXXXXXXXXXXXXXXXXXXXIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 552
IETLGGVFT+LI RNTTIPTKKSQ FSTA D Q+ V I+
Sbjct: 375 GVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTAEDNQSAVTIR 434
Query: 553 VHQGEREMAADNKILGQFSLIGIPPAPRGVPQIEVTFDIDANGIVNVSARDKGTGKEQQI 732
V QGEREMAADNK+LGQF L+GIPPAPRGVPQIEVTFDIDANGIVNVSA+DKGTGKE QI
Sbjct: 435 VFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQI 494
Query: 733 VIQSSGGLSKDEIENMIKRAEENAENDKRKREMV*SCKSSRRIVYDTE 876
IQ+SGGL+ +IE M+K AE NAE DK++RE V + + +V+ TE
Sbjct: 495 RIQASGGLTDADIEKMVKDAEANAEADKKRRESVEAKNQAESLVHSTE 542
>sp|P94317|DNAK_BRAJA Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa
protein) (HSP70)
Length = 633
Score = 361 bits (927), Expect = 1e-99
Identities = 185/288 (64%), Positives = 225/288 (78%)
Frame = +1
Query: 13 KEVREAAEKAKIELSSAIQTDINLPYLTMDNTGPKHLSLKLTRSKLEQLVEHLIKRTIEP 192
+ ++EAAEKAKIELSS QT+INLP++T D TGPKHL++KLTR+K E LV+ LI++T+EP
Sbjct: 255 QRLKEAAEKAKIELSSTTQTEINLPFITADQTGPKHLTMKLTRAKFEALVDDLIQKTVEP 314
Query: 193 CEKAIKDAEVKTSDIREVLLVGGMTRMPRVQETVQKLFGRVPSKSVNPDEAVAMGAAIQX 372
C KA+KDA V +I EV+LVGGM+RMP+VQE V++LFG+ P K VNPDE VA+GAAIQ
Sbjct: 315 CRKALKDAGVTAGEIGEVVLVGGMSRMPKVQEVVKQLFGKEPHKGVNPDEVVAIGAAIQA 374
Query: 373 XXXXXXXXXXXXXXXXXXXXXIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIK 552
IETLGGVFT++I+RNTTIPTKKSQVFSTA D Q V I+
Sbjct: 375 GVLQGDVKDVLLLDVTPLSLGIETLGGVFTRIIDRNTTIPTKKSQVFSTAEDNQNAVTIR 434
Query: 553 VHQGEREMAADNKILGQFSLIGIPPAPRGVPQIEVTFDIDANGIVNVSARDKGTGKEQQI 732
V QGEREMAADNK+LGQF L+GIPPAPRG+PQIEVTFDIDANGIVNVSA+DK TGKEQQI
Sbjct: 435 VFQGEREMAADNKMLGQFDLMGIPPAPRGMPQIEVTFDIDANGIVNVSAKDKATGKEQQI 494
Query: 733 VIQSSGGLSKDEIENMIKRAEENAENDKRKREMV*SCKSSRRIVYDTE 876
IQ+SGGLS+ +IE M+K AE NAE DK++RE V + + +V+ TE
Sbjct: 495 RIQASGGLSEADIEKMVKDAEANAEADKKRREAVTAKNEADGLVHSTE 542
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.315 0.132 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,488,899
Number of Sequences: 369166
Number of extensions: 1414624
Number of successful extensions: 5682
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4979
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8694177530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)