Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_M13
(838 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8CF93|GLT13_MOUSE Polypeptide N-acetylgalactosaminyltra... 181 2e-45
sp|Q6UE39|GLT13_RAT Polypeptide N-acetylgalactosaminyltrans... 181 2e-45
sp|Q07537|GALT1_BOVIN Polypeptide N-acetylgalactosaminyltra... 181 2e-45
sp|Q29121|GALT1_PIG Polypeptide N-acetylgalactosaminyltrans... 180 4e-45
sp|Q10472|GALT1_HUMAN Polypeptide N-acetylgalactosaminyltra... 180 5e-45
sp|Q8IUC8|GLT13_HUMAN Polypeptide N-acetylgalactosaminyltra... 179 6e-45
sp|O08912|GALT1_MOUSE Polypeptide N-acetylgalactosaminyltra... 179 6e-45
sp|Q10473|GALT1_RAT Polypeptide N-acetylgalactosaminyltrans... 176 5e-44
sp|Q9U2C4|GALT9_CAEEL Probable N-acetylgalactosaminyltransf... 166 7e-41
sp|O61397|GALT7_CAEEL Probable N-acetylgalactosaminyltransf... 165 2e-40
>sp|Q8CF93|GLT13_MOUSE Polypeptide N-acetylgalactosaminyltransferase 13 (Protein-UDP
acetylgalactosaminyltransferase 13)
(UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase 13) (Polypeptide
GalNAc transferase 13) (GalNAc-T13) (pp-GaNTase 13)
Length = 556
Score = 181 bits (460), Expect = 2e-45
Identities = 94/182 (51%), Positives = 125/182 (68%)
Frame = +3
Query: 288 QKGPGENGASVSLTEEETKNLDEVMKKEAFNRPTSDRISLQRSLPDFRNSECKNAVYPEN 467
Q+GPGE G +V + +++ + + E+ K FN SD I+L RSLPD R CK VYP+
Sbjct: 54 QEGPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTKVYPDE 113
Query: 468 LLTMSVIIIFHNEAWSALIRTAHSVVNRSPPRFLKEVILFDDASYKVGLGTELEAYVQTQ 647
L SV+I+FHNEAWS L+RT +SV+NRSP L EVIL DDAS + L LE YV+T
Sbjct: 114 LPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYVKTL 173
Query: 648 WPDKIVRIVRSKIRLGLIRARLEGAKAAVGDVLMFLDSHCEVTTGWLEPILYRIQQKRET 827
+ V+I+R + R GLIRARL GA A+ G V+ FLD+HCE T GWLEP+L RI++ R+T
Sbjct: 174 --EVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKT 231
Query: 828 MI 833
++
Sbjct: 232 VV 233
>sp|Q6UE39|GLT13_RAT Polypeptide N-acetylgalactosaminyltransferase 13 (Protein-UDP
acetylgalactosaminyltransferase 13)
(UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase 13) (Polypeptide
GalNAc transferase 13) (GalNAc-T13) (pp-GaNTase 13)
Length = 556
Score = 181 bits (460), Expect = 2e-45
Identities = 94/182 (51%), Positives = 125/182 (68%)
Frame = +3
Query: 288 QKGPGENGASVSLTEEETKNLDEVMKKEAFNRPTSDRISLQRSLPDFRNSECKNAVYPEN 467
Q+GPGE G +V + +++ + + E+ K FN SD I+L RSLPD R CK VYP+
Sbjct: 54 QEGPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTKVYPDE 113
Query: 468 LLTMSVIIIFHNEAWSALIRTAHSVVNRSPPRFLKEVILFDDASYKVGLGTELEAYVQTQ 647
L SV+I+FHNEAWS L+RT +SV+NRSP L EVIL DDAS + L LE YV+T
Sbjct: 114 LPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYVKTL 173
Query: 648 WPDKIVRIVRSKIRLGLIRARLEGAKAAVGDVLMFLDSHCEVTTGWLEPILYRIQQKRET 827
+ V+I+R + R GLIRARL GA A+ G V+ FLD+HCE T GWLEP+L RI++ R+T
Sbjct: 174 --EVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKT 231
Query: 828 MI 833
++
Sbjct: 232 VV 233
>sp|Q07537|GALT1_BOVIN Polypeptide N-acetylgalactosaminyltransferase 1 (Protein-UDP
acetylgalactosaminyltransferase 1)
(UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc
transferase 1) (GalNAc-T1) (pp-GaNTase 1) [Contains:
Polypeptide N-acetylgalactosaminyltransferase 1, soluble
form]
Length = 559
Score = 181 bits (459), Expect = 2e-45
Identities = 92/182 (50%), Positives = 125/182 (68%), Gaps = 1/182 (0%)
Frame = +3
Query: 291 KGPGENGASVSLTEEETKNLDEVMKKEAFNRPTSDRISLQRSLPDFRNSECKNAVYPENL 470
+GPGE G V + +E+ + + E+ K FN S+ I+L RSLPD R CK VYP+NL
Sbjct: 56 EGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNL 115
Query: 471 LTMSVIIIFHNEAWSALIRTAHSVVNRSPPRFLKEVILFDDASYKVGLGTELEAYVQTQW 650
T SV+I+FHNEAWS L+RT HSV+NRSP L+E++L DDAS + L LE+YV+
Sbjct: 116 PTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKRPLESYVKKL- 174
Query: 651 PDKI-VRIVRSKIRLGLIRARLEGAKAAVGDVLMFLDSHCEVTTGWLEPILYRIQQKRET 827
K+ V ++R + R GLIRARL+GA + G V+ FLD+HCE T GWLEP+L RI+ R+T
Sbjct: 175 --KVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRKT 232
Query: 828 MI 833
++
Sbjct: 233 VV 234
>sp|Q29121|GALT1_PIG Polypeptide N-acetylgalactosaminyltransferase 1 (Protein-UDP
acetylgalactosaminyltransferase 1)
(UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc
transferase 1) (GalNAc-T1) (pp-GaNTase 1) [Contains:
Polypeptide N-acetylgalactosaminyltransferase 1, soluble
form]
Length = 559
Score = 180 bits (457), Expect = 4e-45
Identities = 92/182 (50%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Frame = +3
Query: 291 KGPGENGASVSLTEEETKNLDEVMKKEAFNRPTSDRISLQRSLPDFRNSECKNAVYPENL 470
+GPGE G V + +E+ + E+ K FN S+ I+L RSLPD R CK VYP+NL
Sbjct: 56 EGPGEMGKPVVIPKEDQDKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNL 115
Query: 471 LTMSVIIIFHNEAWSALIRTAHSVVNRSPPRFLKEVILFDDASYKVGLGTELEAYVQTQW 650
T SV+I+FHNEAWS L+RT HSV+NRSP L+E++L DDAS + L LE+YV+
Sbjct: 116 PTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKRPLESYVKKL- 174
Query: 651 PDKI-VRIVRSKIRLGLIRARLEGAKAAVGDVLMFLDSHCEVTTGWLEPILYRIQQKRET 827
K+ V ++R + R GLIRARL+GA + G V+ FLD+HCE T GWLEP+L RI+ R+T
Sbjct: 175 --KVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRKT 232
Query: 828 MI 833
++
Sbjct: 233 VV 234
>sp|Q10472|GALT1_HUMAN Polypeptide N-acetylgalactosaminyltransferase 1 (Protein-UDP
acetylgalactosaminyltransferase 1)
(UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc
transferase 1) (GalNAc-T1) (pp-GaNTase 1) [Contains:
Polypeptide N-acetylgalactosaminyltransferase 1, soluble
form]
Length = 559
Score = 180 bits (456), Expect = 5e-45
Identities = 91/182 (50%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Frame = +3
Query: 291 KGPGENGASVSLTEEETKNLDEVMKKEAFNRPTSDRISLQRSLPDFRNSECKNAVYPENL 470
+GPGE G V + +E+ + + E+ K FN S+ I+L RSLPD R CK VYP+NL
Sbjct: 56 EGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNL 115
Query: 471 LTMSVIIIFHNEAWSALIRTAHSVVNRSPPRFLKEVILFDDASYKVGLGTELEAYVQTQW 650
T SV+I+FHNEAWS L+RT HSV+NRSP ++E++L DDAS + L LE+YV+
Sbjct: 116 PTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKL- 174
Query: 651 PDKI-VRIVRSKIRLGLIRARLEGAKAAVGDVLMFLDSHCEVTTGWLEPILYRIQQKRET 827
K+ V ++R + R GLIRARL+GA + G V+ FLD+HCE T GWLEP+L RI+ R T
Sbjct: 175 --KVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRRT 232
Query: 828 MI 833
++
Sbjct: 233 VV 234
>sp|Q8IUC8|GLT13_HUMAN Polypeptide N-acetylgalactosaminyltransferase 13 (Protein-UDP
acetylgalactosaminyltransferase 13)
(UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase 13) (Polypeptide
GalNAc transferase 13) (GalNAc-T13) (pp-GaNTase 13)
Length = 556
Score = 179 bits (455), Expect = 6e-45
Identities = 93/182 (51%), Positives = 124/182 (68%)
Frame = +3
Query: 288 QKGPGENGASVSLTEEETKNLDEVMKKEAFNRPTSDRISLQRSLPDFRNSECKNAVYPEN 467
Q+GPGE G +V + +++ + + E+ K FN SD I+L RSLPD R CK VYP+
Sbjct: 54 QEGPGEMGKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTKVYPDE 113
Query: 468 LLTMSVIIIFHNEAWSALIRTAHSVVNRSPPRFLKEVILFDDASYKVGLGTELEAYVQTQ 647
L SV+I+FHNEAWS L+RT +SV+NRSP L EVIL DDAS + L LE YV+
Sbjct: 114 LPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYVKNL 173
Query: 648 WPDKIVRIVRSKIRLGLIRARLEGAKAAVGDVLMFLDSHCEVTTGWLEPILYRIQQKRET 827
+ V+I+R + R GLIRARL GA A+ G V+ FLD+HCE T GWLEP+L RI++ R+T
Sbjct: 174 --EVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKT 231
Query: 828 MI 833
++
Sbjct: 232 VV 233
>sp|O08912|GALT1_MOUSE Polypeptide N-acetylgalactosaminyltransferase 1 (Protein-UDP
acetylgalactosaminyltransferase 1)
(UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc
transferase 1) (GalNAc-T1) (pp-GaNTase 1) [Contains:
Polypeptide N-acetylgalactosaminyltransferase 1, soluble
form]
Length = 559
Score = 179 bits (455), Expect = 6e-45
Identities = 91/182 (50%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Frame = +3
Query: 291 KGPGENGASVSLTEEETKNLDEVMKKEAFNRPTSDRISLQRSLPDFRNSECKNAVYPENL 470
+GPGE G V + +E+ + + E+ K FN S+ I+L RSLPD R CK VYP+NL
Sbjct: 56 EGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNL 115
Query: 471 LTMSVIIIFHNEAWSALIRTAHSVVNRSPPRFLKEVILFDDASYKVGLGTELEAYVQTQW 650
T SV+I+FHNEAWS L+RT HSV+NRSP ++E++L DDAS + L LE+YV+
Sbjct: 116 PTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKL- 174
Query: 651 PDKI-VRIVRSKIRLGLIRARLEGAKAAVGDVLMFLDSHCEVTTGWLEPILYRIQQKRET 827
K+ V ++R + R GLIRARL+GA + G V+ FLD+HCE T GWLEP+L RI+ R T
Sbjct: 175 --KVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRT 232
Query: 828 MI 833
++
Sbjct: 233 VV 234
>sp|Q10473|GALT1_RAT Polypeptide N-acetylgalactosaminyltransferase 1 (Protein-UDP
acetylgalactosaminyltransferase 1)
(UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc
transferase 1) (GalNAc-T1) (pp-GaNTase 1) [Contains:
Polypeptide N-acetylgalactosaminyltransferase 1, soluble
form]
Length = 559
Score = 176 bits (447), Expect = 5e-44
Identities = 89/182 (48%), Positives = 123/182 (67%), Gaps = 1/182 (0%)
Frame = +3
Query: 291 KGPGENGASVSLTEEETKNLDEVMKKEAFNRPTSDRISLQRSLPDFRNSECKNAVYPENL 470
+GPGE G V + +E+ + + E+ K FN S+ I+ RSLPD R CK VYP++L
Sbjct: 56 EGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEMIAFNRSLPDVRLEGCKTKVYPDSL 115
Query: 471 LTMSVIIIFHNEAWSALIRTAHSVVNRSPPRFLKEVILFDDASYKVGLGTELEAYVQTQW 650
T SV+I+FHNEAWS L+RT HSV+NRSP ++E++L DDAS + L LE+YV+
Sbjct: 116 PTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKL- 174
Query: 651 PDKI-VRIVRSKIRLGLIRARLEGAKAAVGDVLMFLDSHCEVTTGWLEPILYRIQQKRET 827
K+ V ++R + R GLIRARL+GA + G V+ FLD+HCE T GWLEP+L RI+ R T
Sbjct: 175 --KVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRRT 232
Query: 828 MI 833
++
Sbjct: 233 VV 234
>sp|Q9U2C4|GALT9_CAEEL Probable N-acetylgalactosaminyltransferase 9 (Protein-UDP
acetylgalactosaminyltransferase 9)
(UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase 9) (pp-GaNTase 9)
Length = 579
Score = 166 bits (420), Expect = 7e-41
Identities = 94/201 (46%), Positives = 128/201 (63%), Gaps = 1/201 (0%)
Frame = +3
Query: 234 TYNYRLHRFKTYTVDQYYQKGPGENGASVSLTEEETKNLDEVMKKEAFNRPTSDRISLQR 413
T+N LH+ YT + +GPGE G V LT ++ + MKK N SD+ISL R
Sbjct: 57 TWNGELHQIPNYTAPR---EGPGEKGKPVVLTGKDAELGQADMKKWFMNVHASDKISLDR 113
Query: 414 SLPDFRNSECKNAVYPENLLTM-SVIIIFHNEAWSALIRTAHSVVNRSPPRFLKEVILFD 590
+PD R CK+ Y L SVIIIF +EAW+ L+RT HSV+NRSPP L+EVIL D
Sbjct: 114 DVPDPRIQACKDIKYDYAALPKTSVIIIFTDEAWTPLLRTVHSVINRSPPELLQEVILLD 173
Query: 591 DASYKVGLGTELEAYVQTQWPDKIVRIVRSKIRLGLIRARLEGAKAAVGDVLMFLDSHCE 770
D S + L L+ +++ ++ K VR++R +R GLIRA+L GA+ AVGD+++FLDSHCE
Sbjct: 174 DNSKRQELQEPLDEHIK-RFGGK-VRLIRKHVRHGLIRAKLAGAREAVGDIIVFLDSHCE 231
Query: 771 VTTGWLEPILYRIQQKRETMI 833
GWLEPI+ RI +R ++
Sbjct: 232 ANHGWLEPIVQRISDERTAIV 252
>sp|O61397|GALT7_CAEEL Probable N-acetylgalactosaminyltransferase 7 (Protein-UDP
acetylgalactosaminyltransferase 7)
(UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase 7) (pp-GaNTase 7)
Length = 601
Score = 165 bits (417), Expect = 2e-40
Identities = 85/181 (46%), Positives = 123/181 (67%), Gaps = 1/181 (0%)
Frame = +3
Query: 297 PGENGASVSLTEEETKNLDEVMKKE-AFNRPTSDRISLQRSLPDFRNSECKNAVYPENLL 473
PGE+G V +T+EE +KE FN SD IS+ R++PD R ECK+ YPE L
Sbjct: 97 PGEHGKPVPVTDEEGMAAGRAAEKEFGFNTYVSDMISMNRTIPDIRPEECKHWDYPEKLP 156
Query: 474 TMSVIIIFHNEAWSALIRTAHSVVNRSPPRFLKEVILFDDASYKVGLGTELEAYVQTQWP 653
T+SV+++FHNE W+ L+RT HSV+ RSPP +++V++ DD S K L +L+ YV T++
Sbjct: 157 TVSVVVVFHNEGWTPLLRTVHSVLLRSPPELIEQVVMVDDDSDKPHLKEKLDKYV-TRFN 215
Query: 654 DKIVRIVRSKIRLGLIRARLEGAKAAVGDVLMFLDSHCEVTTGWLEPILYRIQQKRETMI 833
K++ +VR++ R GLI AR GAK + G+V++FLD+HCEV T WL P+L I++ R+ M
Sbjct: 216 GKVI-VVRTEQREGLINARSIGAKHSTGEVVLFLDAHCEVNTNWLPPLLAPIKRNRKVMT 274
Query: 834 V 836
V
Sbjct: 275 V 275
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,255,711
Number of Sequences: 369166
Number of extensions: 1397282
Number of successful extensions: 3634
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3550
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8148988185
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)