Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_K14
(684 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P67962|KC1A_CHICK Casein kinase I, alpha isoform (CKI-al... 332 4e-91
sp|P48729|KC1A_HUMAN Casein kinase I, alpha isoform (CKI-al... 332 4e-91
sp|P67829|KC1A_SHEEP Casein kinase I, alpha isoform (CKI-al... 332 4e-91
sp|P97633|KC1A_RAT Casein kinase I, alpha isoform (CKI-alph... 331 9e-91
sp|P42168|YKL1_CAEEL Putative casein kinase I C03C10.1 in c... 330 3e-90
sp|Q8N752|KC1AL_HUMAN Casein kinase I, alpha-like isoform (... 313 2e-85
sp|P54367|KC1A_DROME Casein kinase I, alpha isoform (CKI-al... 303 3e-82
sp|P40235|HHP1_SCHPO Casein kinase I homolog hhp1 294 1e-79
sp|P42158|KC1D_ARATH Casein kinase I, delta isoform-like (C... 293 4e-79
sp|Q06486|KC1D_RAT Casein kinase I, delta isoform (CKI-delt... 291 1e-78
>sp|P67962|KC1A_CHICK Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67963|KC1A_XENLA Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 337
Score = 332 bits (852), Expect = 4e-91
Identities = 160/223 (71%), Positives = 187/223 (83%)
Frame = +2
Query: 2 KWRLVRKIGSGSFGDIYLGVAVSNGEEVAVKLESVNARHPQLLYESKVYKFLQDGVGIPR 181
K++LVRKIGSGSFGDIYL + ++NGEEVAVKLES ARHPQLLYESK+YK LQ GVGIP
Sbjct: 16 KYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPH 75
Query: 182 IRWYGFDGVKNQYNALVMDLLGPSLEDLFNFCGRRFTMKTVLMLAEQMLTRVEFIHSKDF 361
IRWYG + YN LVMDLLGPSLEDLFNFC RRFTMKTVLMLA+QM++R+E++H+K+F
Sbjct: 76 IRWYGQE---KDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNF 132
Query: 362 IHRDIKPDNFLMGIGRHCNKLFVVDFGLSKKYKDTKTKAHIPYREDKNLTGTARYASINA 541
IHRDIKPDNFLMGIGRHCNKLF++DFGL+KKY+D +T+ HIPYREDKNLTGTARYASINA
Sbjct: 133 IHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINA 192
Query: 542 HAGIEQSRRDDMESMGIRVHVLLAQHSPVAGIEGQ*QETKIRK 670
H GIEQSRRDDMES+G + P G++ ++ K K
Sbjct: 193 HLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEK 235
Score = 50.8 bits (120), Expect = 3e-06
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +3
Query: 588 GYVFMYFLRSTLPWQVLKANNKKQKYERIYEK 683
GYV MYF R++LPWQ LKA KKQKYE+I EK
Sbjct: 208 GYVLMYFNRTSLPWQGLKAATKKQKYEKISEK 239
>sp|P48729|KC1A_HUMAN Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|Q8BK63|KC1A_MOUSE Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 337
Score = 332 bits (852), Expect = 4e-91
Identities = 160/223 (71%), Positives = 187/223 (83%)
Frame = +2
Query: 2 KWRLVRKIGSGSFGDIYLGVAVSNGEEVAVKLESVNARHPQLLYESKVYKFLQDGVGIPR 181
K++LVRKIGSGSFGDIYL + ++NGEEVAVKLES ARHPQLLYESK+YK LQ GVGIP
Sbjct: 16 KYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPH 75
Query: 182 IRWYGFDGVKNQYNALVMDLLGPSLEDLFNFCGRRFTMKTVLMLAEQMLTRVEFIHSKDF 361
IRWYG + YN LVMDLLGPSLEDLFNFC RRFTMKTVLMLA+QM++R+E++H+K+F
Sbjct: 76 IRWYGQE---KDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNF 132
Query: 362 IHRDIKPDNFLMGIGRHCNKLFVVDFGLSKKYKDTKTKAHIPYREDKNLTGTARYASINA 541
IHRDIKPDNFLMGIGRHCNKLF++DFGL+KKY+D +T+ HIPYREDKNLTGTARYASINA
Sbjct: 133 IHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINA 192
Query: 542 HAGIEQSRRDDMESMGIRVHVLLAQHSPVAGIEGQ*QETKIRK 670
H GIEQSRRDDMES+G + P G++ ++ K K
Sbjct: 193 HLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEK 235
Score = 50.8 bits (120), Expect = 3e-06
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +3
Query: 588 GYVFMYFLRSTLPWQVLKANNKKQKYERIYEK 683
GYV MYF R++LPWQ LKA KKQKYE+I EK
Sbjct: 208 GYVLMYFNRTSLPWQGLKAATKKQKYEKISEK 239
>sp|P67829|KC1A_SHEEP Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67828|KC1A_RABIT Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67827|KC1A_BOVIN Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 325
Score = 332 bits (852), Expect = 4e-91
Identities = 160/223 (71%), Positives = 187/223 (83%)
Frame = +2
Query: 2 KWRLVRKIGSGSFGDIYLGVAVSNGEEVAVKLESVNARHPQLLYESKVYKFLQDGVGIPR 181
K++LVRKIGSGSFGDIYL + ++NGEEVAVKLES ARHPQLLYESK+YK LQ GVGIP
Sbjct: 16 KYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPH 75
Query: 182 IRWYGFDGVKNQYNALVMDLLGPSLEDLFNFCGRRFTMKTVLMLAEQMLTRVEFIHSKDF 361
IRWYG + YN LVMDLLGPSLEDLFNFC RRFTMKTVLMLA+QM++R+E++H+K+F
Sbjct: 76 IRWYGQE---KDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNF 132
Query: 362 IHRDIKPDNFLMGIGRHCNKLFVVDFGLSKKYKDTKTKAHIPYREDKNLTGTARYASINA 541
IHRDIKPDNFLMGIGRHCNKLF++DFGL+KKY+D +T+ HIPYREDKNLTGTARYASINA
Sbjct: 133 IHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINA 192
Query: 542 HAGIEQSRRDDMESMGIRVHVLLAQHSPVAGIEGQ*QETKIRK 670
H GIEQSRRDDMES+G + P G++ ++ K K
Sbjct: 193 HLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEK 235
Score = 50.8 bits (120), Expect = 3e-06
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +3
Query: 588 GYVFMYFLRSTLPWQVLKANNKKQKYERIYEK 683
GYV MYF R++LPWQ LKA KKQKYE+I EK
Sbjct: 208 GYVLMYFNRTSLPWQGLKAATKKQKYEKISEK 239
>sp|P97633|KC1A_RAT Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 325
Score = 331 bits (849), Expect = 9e-91
Identities = 160/223 (71%), Positives = 186/223 (83%)
Frame = +2
Query: 2 KWRLVRKIGSGSFGDIYLGVAVSNGEEVAVKLESVNARHPQLLYESKVYKFLQDGVGIPR 181
K++LVRKIGSGSFGDIYL + ++NGEEVAVKLES ARHPQLLYESK+YK LQ GVGIP
Sbjct: 16 KYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPH 75
Query: 182 IRWYGFDGVKNQYNALVMDLLGPSLEDLFNFCGRRFTMKTVLMLAEQMLTRVEFIHSKDF 361
IRWYG YN LVMDLLGPSLEDLFNFC RRFTMKTVLMLA+QM++R+E++H+K+F
Sbjct: 76 IRWYGQG---KDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNF 132
Query: 362 IHRDIKPDNFLMGIGRHCNKLFVVDFGLSKKYKDTKTKAHIPYREDKNLTGTARYASINA 541
IHRDIKPDNFLMGIGRHCNKLF++DFGL+KKY+D +T+ HIPYREDKNLTGTARYASINA
Sbjct: 133 IHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINA 192
Query: 542 HAGIEQSRRDDMESMGIRVHVLLAQHSPVAGIEGQ*QETKIRK 670
H GIEQSRRDDMES+G + P G++ ++ K K
Sbjct: 193 HLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEK 235
Score = 50.8 bits (120), Expect = 3e-06
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +3
Query: 588 GYVFMYFLRSTLPWQVLKANNKKQKYERIYEK 683
GYV MYF R++LPWQ LKA KKQKYE+I EK
Sbjct: 208 GYVLMYFNRTSLPWQGLKAATKKQKYEKISEK 239
>sp|P42168|YKL1_CAEEL Putative casein kinase I C03C10.1 in chromosome III
Length = 341
Score = 330 bits (845), Expect = 3e-90
Identities = 158/223 (70%), Positives = 187/223 (83%)
Frame = +2
Query: 2 KWRLVRKIGSGSFGDIYLGVAVSNGEEVAVKLESVNARHPQLLYESKVYKFLQDGVGIPR 181
K++L+RKIGSGSFGDIY+ + V+NGEEVA+KLES ARHPQLLYESKVY+ LQ GVGIP
Sbjct: 15 KYKLIRKIGSGSFGDIYVSINVTNGEEVAIKLESNRARHPQLLYESKVYRILQGGVGIPH 74
Query: 182 IRWYGFDGVKNQYNALVMDLLGPSLEDLFNFCGRRFTMKTVLMLAEQMLTRVEFIHSKDF 361
IRWYG + +YN LVMDLLGPSLEDLFNFC RRFTMKTVLMLA+QM+ R+E++H K+F
Sbjct: 75 IRWYG---TEREYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMIGRIEYVHVKNF 131
Query: 362 IHRDIKPDNFLMGIGRHCNKLFVVDFGLSKKYKDTKTKAHIPYREDKNLTGTARYASINA 541
IHRDIKPDNFLMGIGRHCNKLF++DFGL+KKY+D++T+ HIPYREDKNLTGTARYASINA
Sbjct: 132 IHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDSRTRTHIPYREDKNLTGTARYASINA 191
Query: 542 HAGIEQSRRDDMESMGIRVHVLLAQHSPVAGIEGQ*QETKIRK 670
H GIEQSRRDDMES+G + P G++ ++ K K
Sbjct: 192 HLGIEQSRRDDMESLGYVLMYFNRGTLPWQGLKAATKKQKYEK 234
Score = 52.0 bits (123), Expect = 1e-06
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +3
Query: 588 GYVFMYFLRSTLPWQVLKANNKKQKYERIYEK 683
GYV MYF R TLPWQ LKA KKQKYE+I EK
Sbjct: 207 GYVLMYFNRGTLPWQGLKAATKKQKYEKISEK 238
>sp|Q8N752|KC1AL_HUMAN Casein kinase I, alpha-like isoform (CKI-alpha-like) (CK1)
Length = 337
Score = 313 bits (803), Expect = 2e-85
Identities = 149/223 (66%), Positives = 179/223 (80%)
Frame = +2
Query: 2 KWRLVRKIGSGSFGDIYLGVAVSNGEEVAVKLESVNARHPQLLYESKVYKFLQDGVGIPR 181
K++LVRKIGSGSFGD+YLG+ +NGEEVAVKLES +HPQLLYESK+Y LQ GVGIP
Sbjct: 16 KYKLVRKIGSGSFGDVYLGITTTNGEEVAVKLESQKVKHPQLLYESKLYTILQGGVGIPH 75
Query: 182 IRWYGFDGVKNQYNALVMDLLGPSLEDLFNFCGRRFTMKTVLMLAEQMLTRVEFIHSKDF 361
+ WYG + N LVMDLLGPSLEDLFNFC RRFTMKTVLMLA+QM++R+E++H+K+F
Sbjct: 76 MHWYGQE---KDNNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNF 132
Query: 362 IHRDIKPDNFLMGIGRHCNKLFVVDFGLSKKYKDTKTKAHIPYREDKNLTGTARYASINA 541
+HRDIKPDNFLMG GRHCNKLF++DFGL+KKY+D +T+ HIPYREDK+L GT RYASINA
Sbjct: 133 LHRDIKPDNFLMGTGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKHLIGTVRYASINA 192
Query: 542 HAGIEQSRRDDMESMGIRVHVLLAQHSPVAGIEGQ*QETKIRK 670
H GIEQSRRDDMES+G P G++ ++ K K
Sbjct: 193 HLGIEQSRRDDMESLGYVFMYFNRTSLPWQGLKAMTKKQKYEK 235
Score = 53.1 bits (126), Expect = 7e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +3
Query: 588 GYVFMYFLRSTLPWQVLKANNKKQKYERIYEK 683
GYVFMYF R++LPWQ LKA KKQKYE+I EK
Sbjct: 208 GYVFMYFNRTSLPWQGLKAMTKKQKYEKISEK 239
>sp|P54367|KC1A_DROME Casein kinase I, alpha isoform (CKI-alpha) (DmCK1)
Length = 337
Score = 303 bits (776), Expect = 3e-82
Identities = 149/223 (66%), Positives = 183/223 (82%)
Frame = +2
Query: 2 KWRLVRKIGSGSFGDIYLGVAVSNGEEVAVKLESVNARHPQLLYESKVYKFLQDGVGIPR 181
K+R++RKIGSGSFGDIYLG+++ +GEEVA+K+ES +ARHPQLLYE+K+Y+ L GVG PR
Sbjct: 19 KYRVIRKIGSGSFGDIYLGMSIQSGEEVAIKMESAHARHPQLLYEAKLYRILSGGVGFPR 78
Query: 182 IRWYGFDGVKNQYNALVMDLLGPSLEDLFNFCGRRFTMKTVLMLAEQMLTRVEFIHSKDF 361
IR +G + +N LVMDLLGPSLEDLFNFC R FT+KTVLML +QM+ R+E+IH K F
Sbjct: 79 IRHHGKE---KNFNTLVMDLLGPSLEDLFNFCTRHFTIKTVLMLVDQMIGRLEYIHLKCF 135
Query: 362 IHRDIKPDNFLMGIGRHCNKLFVVDFGLSKKYKDTKTKAHIPYREDKNLTGTARYASINA 541
IHRDIKPDNFLMGIGRHCNKLF++DFGL+KK++D T+ HI YREDKNLTGTARYASINA
Sbjct: 136 IHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKFRDPHTRHHIVYREDKNLTGTARYASINA 195
Query: 542 HAGIEQSRRDDMESMGIRVHVLLAQHSPVAGIEGQ*QETKIRK 670
H GIEQSRRDDMES+G +V++ + V +G TK +K
Sbjct: 196 HLGIEQSRRDDMESLG---YVMMYFNRGVLPWQGMKANTKQQK 235
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3
Query: 588 GYVFMYFLRSTLPWQVLKANNKKQKYERIYEK 683
GYV MYF R LPWQ +KAN K+QKYE+I EK
Sbjct: 211 GYVMMYFNRGVLPWQGMKANTKQQKYEKISEK 242
>sp|P40235|HHP1_SCHPO Casein kinase I homolog hhp1
Length = 365
Score = 294 bits (753), Expect = 1e-79
Identities = 142/223 (63%), Positives = 178/223 (79%)
Frame = +2
Query: 2 KWRLVRKIGSGSFGDIYLGVAVSNGEEVAVKLESVNARHPQLLYESKVYKFLQDGVGIPR 181
K+R+ RKIGSGSFGDIYLG V +GEEVA+KLES A+HPQL YE +VY+ L GVGIP
Sbjct: 10 KYRIGRKIGSGSFGDIYLGTNVVSGEEVAIKLESTRAKHPQLEYEYRVYRILSGGVGIPF 69
Query: 182 IRWYGFDGVKNQYNALVMDLLGPSLEDLFNFCGRRFTMKTVLMLAEQMLTRVEFIHSKDF 361
+RW+G V+ YNA+VMDLLGPSLEDLFNFC R+F++KTVL+LA+Q+++R+EFIHSK F
Sbjct: 70 VRWFG---VECDYNAMVMDLLGPSLEDLFNFCNRKFSLKTVLLLADQLISRIEFIHSKSF 126
Query: 362 IHRDIKPDNFLMGIGRHCNKLFVVDFGLSKKYKDTKTKAHIPYREDKNLTGTARYASINA 541
+HRDIKPDNFLMGIG+ N++ ++DFGL+KKY+D KT HIPYRE+KNLTGTARYASIN
Sbjct: 127 LHRDIKPDNFLMGIGKRGNQVNIIDFGLAKKYRDHKTHLHIPYRENKNLTGTARYASINT 186
Query: 542 HAGIEQSRRDDMESMGIRVHVLLAQHSPVAGIEGQ*QETKIRK 670
H GIEQSRRDD+ES+G + P G++ ++ K K
Sbjct: 187 HLGIEQSRRDDLESLGYVLVYFCRGSLPWQGLKATTKKQKYEK 229
Score = 50.8 bits (120), Expect = 3e-06
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3
Query: 588 GYVFMYFLRSTLPWQVLKANNKKQKYERIYEK 683
GYV +YF R +LPWQ LKA KKQKYE+I EK
Sbjct: 202 GYVLVYFCRGSLPWQGLKATTKKQKYEKIMEK 233
>sp|P42158|KC1D_ARATH Casein kinase I, delta isoform-like (CKI-delta)
Length = 450
Score = 293 bits (749), Expect = 4e-79
Identities = 135/223 (60%), Positives = 176/223 (78%)
Frame = +2
Query: 2 KWRLVRKIGSGSFGDIYLGVAVSNGEEVAVKLESVNARHPQLLYESKVYKFLQDGVGIPR 181
K+RL RKIGSGSFG+IYLG + EE+A+KLE+V +HPQLLYESK+Y+ LQ G G+P
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIHTNEELAIKLENVKTKHPQLLYESKLYRILQGGTGVPN 67
Query: 182 IRWYGFDGVKNQYNALVMDLLGPSLEDLFNFCGRRFTMKTVLMLAEQMLTRVEFIHSKDF 361
++W+G +G YN LVMDLLGPSLEDLFNFC R+ ++K+VLMLA+QM+ RVEF HSK F
Sbjct: 68 VKWFGVEG---DYNVLVMDLLGPSLEDLFNFCSRKLSLKSVLMLADQMINRVEFFHSKSF 124
Query: 362 IHRDIKPDNFLMGIGRHCNKLFVVDFGLSKKYKDTKTKAHIPYREDKNLTGTARYASINA 541
+HRD+KPDNFLMG+GR N+++++DFGL+KKY+D+ T HIPYRE+KNLTGTARYAS+N
Sbjct: 125 LHRDLKPDNFLMGLGRRANQVYIIDFGLAKKYRDSTTHQHIPYRENKNLTGTARYASMNT 184
Query: 542 HAGIEQSRRDDMESMGIRVHVLLAQHSPVAGIEGQ*QETKIRK 670
H GIEQSRRDD+ES+G + L P G++ ++ K +
Sbjct: 185 HLGIEQSRRDDLESLGYILMYFLKGSLPWQGLKAGTKKQKYER 227
Score = 53.5 bits (127), Expect = 5e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +3
Query: 588 GYVFMYFLRSTLPWQVLKANNKKQKYERIYEK 683
GY+ MYFL+ +LPWQ LKA KKQKYERI EK
Sbjct: 200 GYILMYFLKGSLPWQGLKAGTKKQKYERISEK 231
>sp|Q06486|KC1D_RAT Casein kinase I, delta isoform (CKI-delta)
sp|Q9DC28|KC1D_MOUSE Casein kinase I, delta isoform (CKI-delta) (CKId)
Length = 415
Score = 291 bits (744), Expect = 1e-78
Identities = 134/196 (68%), Positives = 168/196 (85%)
Frame = +2
Query: 2 KWRLVRKIGSGSFGDIYLGVAVSNGEEVAVKLESVNARHPQLLYESKVYKFLQDGVGIPR 181
++RL RKIGSGSFGDIYLG ++ GEEVA+KLE V +HPQL ESK+YK +Q GVGIP
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPT 67
Query: 182 IRWYGFDGVKNQYNALVMDLLGPSLEDLFNFCGRRFTMKTVLMLAEQMLTRVEFIHSKDF 361
IRW G +G YN +VM+LLGPSLEDLFNFC R+F++KTVL+LA+QM++R+E+IHSK+F
Sbjct: 68 IRWCGAEG---DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF 124
Query: 362 IHRDIKPDNFLMGIGRHCNKLFVVDFGLSKKYKDTKTKAHIPYREDKNLTGTARYASINA 541
IHRD+KPDNFLMG+G+ N ++++DFGL+KKY+D +T HIPYRE+KNLTGTARYASIN
Sbjct: 125 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT 184
Query: 542 HAGIEQSRRDDMESMG 589
H GIEQSRRDD+ES+G
Sbjct: 185 HLGIEQSRRDDLESLG 200
Score = 47.8 bits (112), Expect = 3e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 588 GYVFMYFLRSTLPWQVLKANNKKQKYERIYEK 683
GYV MYF +LPWQ LKA K+QKYERI EK
Sbjct: 200 GYVLMYFNLGSLPWQGLKAATKRQKYERISEK 231
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,974,624
Number of Sequences: 369166
Number of extensions: 1567054
Number of successful extensions: 7181
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6498
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5830600200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)