Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_J07
(801 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P60712|ACTB_BOVIN Actin, cytoplasmic 1 (Beta-actin) >gi|... 524 e-148
sp|P63260|ACTG_MOUSE Actin, cytoplasmic 2 (Gamma-actin) >gi... 524 e-148
sp|P63256|ACTG_ANSAN Actin, cytoplasmic 2 (Gamma-actin) 524 e-148
sp|P53505|ACT5_XENLA Actin, cytoplasmic type 5 524 e-148
sp|P84336|ACTB_CAMDR Actin, cytoplasmic 1 (Beta-actin) 524 e-148
sp|P30163|ACT2_ONCVO Actin-2 523 e-148
sp|P53478|ACT5_CHICK Actin, cytoplasmic type 5 523 e-148
sp|P53471|ACT2_SCHMA Actin-2 523 e-148
sp|P10984|ACT2_CAEEL Actin-2 523 e-148
sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cyt... 523 e-148
>sp|P60712|ACTB_BOVIN Actin, cytoplasmic 1 (Beta-actin)
sp|P60713|ACTB_SHEEP Actin, cytoplasmic 1 (Beta-actin)
sp|Q5R1X3|ACTB_PANTR Actin, cytoplasmic 1 (Beta-actin)
sp|P60710|ACTB_MOUSE Actin, cytoplasmic 1 (Beta-actin)
sp|Q711N9|ACTB_MESAU Actin, cytoplasmic 1 (Beta-actin)
sp|P60708|ACTB_HORSE Actin, cytoplasmic 1 (Beta-actin)
sp|Q76N69|ACTB_CERAE Actin, cytoplasmic 1 (Beta-actin)
sp|Q71FK5|ACTB_CAVPO Actin, cytoplasmic 1 (Beta-actin)
sp|P60707|ACTB_TRIVU Actin, cytoplasmic 1 (Beta-actin)
sp|P60711|ACTB_RAT Actin, cytoplasmic 1 (Beta-actin)
sp|P60709|ACTB_HUMAN Actin, cytoplasmic 1 (Beta-actin)
sp|P60706|ACTB_CHICK Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 524 bits (1349), Expect = e-148
Identities = 262/267 (98%), Positives = 266/267 (99%)
Frame = +1
Query: 1 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 180
ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV
Sbjct: 93 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 152
Query: 181 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 360
+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI
Sbjct: 153 MDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212
Query: 361 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESA 540
KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES
Sbjct: 213 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC 272
Query: 541 GIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAP 720
GIHETTFNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+AP
Sbjct: 273 GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 721 PERKYSVWIGGSILASLSTFQQMWISK 801
PERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISK 359
>sp|P63260|ACTG_MOUSE Actin, cytoplasmic 2 (Gamma-actin)
sp|P63259|ACTG_RAT Actin, cytoplasmic 2 (Gamma-actin)
sp|P63257|ACTG_TRIVU Actin, cytoplasmic 2 (Gamma-actin)
sp|P63261|ACTG_HUMAN Actin, cytoplasmic 2 (Gamma-actin)
sp|P63258|ACTG_BOVIN Actin, cytoplasmic 2 (Gamma-actin)
Length = 375
Score = 524 bits (1349), Expect = e-148
Identities = 262/267 (98%), Positives = 266/267 (99%)
Frame = +1
Query: 1 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 180
ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV
Sbjct: 93 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 152
Query: 181 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 360
+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI
Sbjct: 153 MDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212
Query: 361 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESA 540
KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES
Sbjct: 213 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC 272
Query: 541 GIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAP 720
GIHETTFNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+AP
Sbjct: 273 GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 721 PERKYSVWIGGSILASLSTFQQMWISK 801
PERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISK 359
>sp|P63256|ACTG_ANSAN Actin, cytoplasmic 2 (Gamma-actin)
Length = 375
Score = 524 bits (1349), Expect = e-148
Identities = 262/267 (98%), Positives = 266/267 (99%)
Frame = +1
Query: 1 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 180
ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV
Sbjct: 93 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 152
Query: 181 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 360
+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI
Sbjct: 153 MDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212
Query: 361 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESA 540
KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES
Sbjct: 213 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC 272
Query: 541 GIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAP 720
GIHETTFNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+AP
Sbjct: 273 GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 721 PERKYSVWIGGSILASLSTFQQMWISK 801
PERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISK 359
>sp|P53505|ACT5_XENLA Actin, cytoplasmic type 5
Length = 376
Score = 524 bits (1349), Expect = e-148
Identities = 262/267 (98%), Positives = 266/267 (99%)
Frame = +1
Query: 1 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 180
ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 153
Query: 181 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 360
+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI
Sbjct: 154 MDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 361 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESA 540
KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC 273
Query: 541 GIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAP 720
GIHETTFNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+AP
Sbjct: 274 GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 721 PERKYSVWIGGSILASLSTFQQMWISK 801
PERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISK 360
>sp|P84336|ACTB_CAMDR Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 524 bits (1349), Expect = e-148
Identities = 262/267 (98%), Positives = 266/267 (99%)
Frame = +1
Query: 1 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 180
ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV
Sbjct: 93 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 152
Query: 181 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 360
+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI
Sbjct: 153 MDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212
Query: 361 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESA 540
KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES
Sbjct: 213 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC 272
Query: 541 GIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAP 720
GIHETTFNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+AP
Sbjct: 273 GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 721 PERKYSVWIGGSILASLSTFQQMWISK 801
PERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISK 359
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 523 bits (1348), Expect = e-148
Identities = 261/267 (97%), Positives = 266/267 (99%)
Frame = +1
Query: 1 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 180
ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 153
Query: 181 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 360
LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI
Sbjct: 154 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 361 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESA 540
KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPE+LFQPSFLGMESA
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 541 GIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAP 720
GIHETT+NSIMKCD+DIRKDLYAN VLSGGSTMYPGIADRMQKEITALAPSTMKIKI+AP
Sbjct: 274 GIHETTYNSIMKCDIDIRKDLYANNVLSGGSTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 721 PERKYSVWIGGSILASLSTFQQMWISK 801
PERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISK 360
>sp|P53478|ACT5_CHICK Actin, cytoplasmic type 5
Length = 376
Score = 523 bits (1347), Expect = e-148
Identities = 261/267 (97%), Positives = 266/267 (99%)
Frame = +1
Query: 1 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 180
ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 153
Query: 181 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 360
+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI
Sbjct: 154 MDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 361 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESA 540
KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE++FQPSFLGMES
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAIFQPSFLGMESC 273
Query: 541 GIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAP 720
GIHETTFNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+AP
Sbjct: 274 GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 721 PERKYSVWIGGSILASLSTFQQMWISK 801
PERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISK 360
>sp|P53471|ACT2_SCHMA Actin-2
Length = 376
Score = 523 bits (1347), Expect = e-148
Identities = 262/267 (98%), Positives = 266/267 (99%)
Frame = +1
Query: 1 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 180
ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQAVLSLYASGRTTGIV
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQAVLSLYASGRTTGIV 153
Query: 181 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 360
LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI
Sbjct: 154 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 361 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESA 540
KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMESA
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESA 273
Query: 541 GIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAP 720
G+HETTFNSIMKCDVDIRKDLYANTVLSGG+TM+PGIADRMQKEITALAPSTMKIKIVAP
Sbjct: 274 GVHETTFNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIVAP 333
Query: 721 PERKYSVWIGGSILASLSTFQQMWISK 801
PERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISK 360
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 523 bits (1346), Expect = e-148
Identities = 260/267 (97%), Positives = 267/267 (100%)
Frame = +1
Query: 1 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 180
ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 153
Query: 181 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 360
LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI
Sbjct: 154 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213
Query: 361 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESA 540
KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPE+LFQPSFLGMESA
Sbjct: 214 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESA 273
Query: 541 GIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAP 720
GIHET++NSIMKCD+DIRKDLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+AP
Sbjct: 274 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 721 PERKYSVWIGGSILASLSTFQQMWISK 801
PERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISK 360
>sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cytoplasmic beta actin)
Length = 375
Score = 523 bits (1346), Expect = e-148
Identities = 261/267 (97%), Positives = 266/267 (99%)
Frame = +1
Query: 1 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 180
ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV
Sbjct: 93 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 152
Query: 181 LDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 360
+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI
Sbjct: 153 MDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212
Query: 361 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESA 540
KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES
Sbjct: 213 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC 272
Query: 541 GIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAP 720
GIHETT+NSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+AP
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 721 PERKYSVWIGGSILASLSTFQQMWISK 801
PERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISK 359
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,268,164
Number of Sequences: 369166
Number of extensions: 2130205
Number of successful extensions: 6326
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6169
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7570361805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)