Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_F23
(877 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O02350|CBPA_ANOGA Zinc carboxypeptidase A precursor 182 1e-45
sp|P48052|CBPA2_HUMAN Carboxypeptidase A2 precursor 179 1e-44
sp|P19222|CBPA2_RAT Carboxypeptidase A2 precursor 174 2e-43
sp|Q8R4H4|CBPA5_MOUSE Carboxypeptidase A5 precursor 161 3e-39
sp|P09954|CBPA1_PIG Carboxypeptidase A1 precursor 159 1e-38
sp|P00730|CBPA1_BOVIN Carboxypeptidase A1 precursor 157 3e-38
sp|Q9UI42|CBPA4_HUMAN Carboxypeptidase A4 precursor (Carbox... 155 1e-37
sp|Q8WXQ8|CBPA5_HUMAN Carboxypeptidase A5 precursor 154 3e-37
sp|Q8N4T0|CBPA6_HUMAN Carboxypeptidase A6 precursor (Carbox... 150 6e-36
sp|Q7TPZ8|CBPA1_MOUSE Carboxypeptidase A1 precursor 149 8e-36
>sp|O02350|CBPA_ANOGA Zinc carboxypeptidase A precursor
Length = 433
Score = 182 bits (462), Expect = 1e-45
Identities = 105/295 (35%), Positives = 167/295 (56%), Gaps = 3/295 (1%)
Frame = +2
Query: 2 YDGYKVIEVNLKTEYEIKFILQLTEKYEADIWKGPSKVISTH--VMLSPKYFNDFTEALK 175
YD Y++ V +E +++ + + + ++ I+ ++ + ++++P DFTE L+
Sbjct: 34 YDNYRLYRVTPHSEAQLRSVAAMEQASDSLIFLETARKLGDRFDIVVAPHKLADFTETLE 93
Query: 176 KDGIEFKIILENVEDAINKESFMNTNVRLFKLFKKEGPNVNDHFATYEEIMQWISFLTNK 355
D I ++I +NV+ A ++E TN R +GP + + T EEI W+ L ++
Sbjct: 94 SDYIPHELIEQNVQRAFDEERVRLTNKRA------KGPFDWNDYHTLEEIHAWLDQLASE 147
Query: 356 Y-SFVTSNSYGKSYEGRDLKYVKISTGPNRKTILIDGGIHSREWLAVSTVTYMLEKMISD 532
+ V G+S++ R +K VK+S GP R + ++GGIH+REW++ +TVTY+L ++++
Sbjct: 148 HPKEVELLDAGRSHQNRTMKGVKLSYGPGRPGVFLEGGIHAREWISPATVTYILNQLLTS 207
Query: 533 YEVGKPGTLSLLSYYDVYFIPVFNPDGYVFSHTPGNRLWRKNRKPFNYYGKTCYGVDLNR 712
+ +L +D Y P NPDGY ++ NRLWRK RK YG CYG D NR
Sbjct: 208 EDAK---VRALAEKFDWYVFPNANPDGYAYTFQV-NRLWRKTRKA---YGPFCYGADPNR 260
Query: 713 NFDSQFAGAGTSSNPCDDIYRGPYAFSEPETQQFADFVNKLGLNLKLYFSFHAYA 877
N+D +A GTS+N C D Y G AFSE ET+ A FV KL L Y +FH+Y+
Sbjct: 261 NWDFHWAEQGTSNNACSDTYHGSEAFSEVETRSLAAFVEKLRGKLGAYIAFHSYS 315
>sp|P48052|CBPA2_HUMAN Carboxypeptidase A2 precursor
Length = 417
Score = 179 bits (453), Expect = 1e-44
Identities = 111/296 (37%), Positives = 163/296 (55%), Gaps = 6/296 (2%)
Frame = +2
Query: 8 GYKVIEVNLKTEYEIKFILQLT--EKYEADIWKGPSKVIST-HVMLSPKYFNDFTEALKK 178
G +V+E+ E +IK +LQL E + D WK P+ T HV + L+
Sbjct: 22 GDQVLEIVPSNEEQIKNLLQLEAQEHLQLDFWKSPTTPGETAHVRVPFVNVQAVKVFLES 81
Query: 179 DGIEFKIILENVEDAINKESFMNTNVRLFKLFKKEGPNVN-DHFATYEEIMQWISFLTNK 355
GI + I++E+V+ ++KE+ LF ++ N N + T EEI Q + L +
Sbjct: 82 QGIAYSIMIEDVQVLLDKEN----EEMLFNRRRERSGNFNFGAYHTLEEISQEMDNLVAE 137
Query: 356 Y-SFVTSNSYGKSYEGRDLKYVKISTGPNRKTILIDGGIHSREWLAVSTVTYMLEKMISD 532
+ V+ + G S+E R + +K STG ++ I +D GIH+REW+ +T + K++SD
Sbjct: 138 HPGLVSKVNIGSSFENRPMNVLKFSTGGDKPAIWLDAGIHAREWVTQATALWTANKIVSD 197
Query: 533 YEVGK-PGTLSLLSYYDVYFIPVFNPDGYVFSHTPGNRLWRKNRKPFNYYGKTCYGVDLN 709
Y GK P S+L D++ +PV NPDGYVFS T NR+WRK R + G C GVD N
Sbjct: 198 Y--GKDPSITSILDALDIFLLPVTNPDGYVFSQTK-NRMWRKTRSKVS--GSLCVGVDPN 252
Query: 710 RNFDSQFAGAGTSSNPCDDIYRGPYAFSEPETQQFADFVNKLGLNLKLYFSFHAYA 877
RN+D+ F G G SSNPC D Y GP A SE E + DF+ G +K + + H+Y+
Sbjct: 253 RNWDAGFGGPGASSNPCSDSYHGPSANSEVEVKSIVDFIKSHG-KVKAFITLHSYS 307
>sp|P19222|CBPA2_RAT Carboxypeptidase A2 precursor
Length = 417
Score = 174 bits (442), Expect = 2e-43
Identities = 107/295 (36%), Positives = 161/295 (54%), Gaps = 5/295 (1%)
Frame = +2
Query: 8 GYKVIEVNLKTEYEIKFILQLT--EKYEADIWKGPSKVIST-HVMLSPKYFNDFTEALKK 178
G +V+E+ E +I+ +LQL E E D WK P+ T HV + L+
Sbjct: 22 GDQVLEIIPSHEEQIRTLLQLEAEEHLELDFWKSPTIPGETVHVRVPFASIQAVKVFLES 81
Query: 179 DGIEFKIILENVEDAINKESFMNTNVRLFKLFKKEGPNVN-DHFATYEEIMQWI-SFLTN 352
GI++ I++E+V+ +++E LF ++ G N N + + T EEI Q + + +
Sbjct: 82 QGIDYSIMIEDVQVLLDQER----EEMLFNQQRERGGNFNFEAYHTLEEIYQEMDNLVAE 137
Query: 353 KYSFVTSNSYGKSYEGRDLKYVKISTGPNRKTILIDGGIHSREWLAVSTVTYMLEKMISD 532
V+ + G S+E R + +K STG ++ I +D GIH+REW+ +T + K+ SD
Sbjct: 138 NPGLVSKVNLGSSFENRPMNVLKFSTGGDKPAIWLDAGIHAREWVTQATALWTANKIASD 197
Query: 533 YEVGKPGTLSLLSYYDVYFIPVFNPDGYVFSHTPGNRLWRKNRKPFNYYGKTCYGVDLNR 712
Y P SLL+ D++ +PV NPDGYVFS T NR+WRK R + G C GVD NR
Sbjct: 198 YGTD-PAITSLLNTLDIFLLPVTNPDGYVFSQTT-NRMWRKTRSKRS--GSGCVGVDPNR 253
Query: 713 NFDSQFAGAGTSSNPCDDIYRGPYAFSEPETQQFADFVNKLGLNLKLYFSFHAYA 877
N+D+ F G G SS+PC D Y GP SE E + DF+ G +K + + H+Y+
Sbjct: 254 NWDANFGGPGASSSPCSDSYHGPKPNSEVEVKSIVDFIKSHG-KVKAFITLHSYS 307
>sp|Q8R4H4|CBPA5_MOUSE Carboxypeptidase A5 precursor
Length = 436
Score = 161 bits (407), Expect = 3e-39
Identities = 102/300 (34%), Positives = 163/300 (54%), Gaps = 8/300 (2%)
Frame = +2
Query: 2 YDGYKVIEVNLKTEYEIKFI--LQLTEKYEADIWKGPSKVISTHVMLSPKYFNDFTEA-- 169
+ G +V+ V K E ++ + L+ + + D W+GP++ M P F++
Sbjct: 37 FTGDQVLRVLAKNEKQLSLLRDLETQKPQKVDFWRGPARPSLPVDMRVP--FSELPSVKA 94
Query: 170 -LKKDGIEFKIILENVEDAINKESFMNTNVRLFKLFKKEGPNVNDHFATYEEIMQWI-SF 343
LK G+ + I++++++ +++E R +L + + T +EI WI +F
Sbjct: 95 YLKSHGLAYSIMIKDIQVLLDEERDAMAKSR--RLERSTNSFSYSSYHTLDEIYSWIDNF 152
Query: 344 LTNKYSFVTSNSYGKSYEGRDLKYVKISTG-PNRKTILIDGGIHSREWLAVSTVTYMLEK 520
+ + V+ GKS+E R + +K STG PNR I ID GIHSREW+ +T ++ +K
Sbjct: 153 VAEHSNLVSKIHIGKSFENRSILVLKFSTGGPNRPAIWIDTGIHSREWITHATGIWISQK 212
Query: 521 MISDYEVGKPGTLS-LLSYYDVYFIPVFNPDGYVFSHTPGNRLWRKNRKPFNYYGKTCYG 697
+++ Y GK L +L+ D++ V NPDG+ F+H+ NRLWRKN+ + G C G
Sbjct: 213 IVNAY--GKDHVLKRILNTMDIFIEIVTNPDGFAFTHSM-NRLWRKNKS--SQPGIFCIG 267
Query: 698 VDLNRNFDSQFAGAGTSSNPCDDIYRGPYAFSEPETQQFADFVNKLGLNLKLYFSFHAYA 877
VDLNRN+ + F G G++ NPC + YRGP SEPE DF+ G N K S H+Y+
Sbjct: 268 VDLNRNWKAGFGGNGSNKNPCSETYRGPAPESEPEVAAIVDFITGHG-NFKAMISIHSYS 326
>sp|P09954|CBPA1_PIG Carboxypeptidase A1 precursor
Length = 419
Score = 159 bits (401), Expect = 1e-38
Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 8/298 (2%)
Frame = +2
Query: 8 GYKVIEVNLKTEYEIKFILQLT--EKYEADIWKGPSKV-ISTHVMLSPKYFNDFTEALKK 178
G++V+ +++ E +++ + +L E + D W+GP++ V + L+
Sbjct: 22 GHQVLRISVDDEAQVQKVKELEDLEHLQLDFWRGPARPGFPIDVRVPFPSIQAVKVFLEA 81
Query: 179 DGIEFKIILENVEDAINKESFMNTNVRLFKLFKKEGPNVNDHFATY---EEIMQWISFLT 349
GI + I++E+V+ +++E ++F + ++ATY EEI ++ L
Sbjct: 82 HGIRYTIMIEDVQLLLDEEQ-----EQMFASQGRARTTSTFNYATYHTLEEIYDFMDILV 136
Query: 350 NKY-SFVTSNSYGKSYEGRDLKYVKISTGPN-RKTILIDGGIHSREWLAVSTVTYMLEKM 523
++ V+ G SYEGR + +K STG N R I ID GIHSREW+ ++ + +K+
Sbjct: 137 AEHPQLVSKLQIGSSYEGRPIYVLKFSTGGNNRPAIWIDTGIHSREWVTQASGVWFAKKI 196
Query: 524 ISDYEVGKPGTLSLLSYYDVYFIPVFNPDGYVFSHTPGNRLWRKNRKPFNYYGKTCYGVD 703
DY P ++L D++ V NPDG+ F+H+ NR+WRK R + G C GVD
Sbjct: 197 TEDYGQD-PAFTAILDNLDIFLEIVTNPDGFAFTHSE-NRMWRKTRSRTS--GSFCVGVD 252
Query: 704 LNRNFDSQFAGAGTSSNPCDDIYRGPYAFSEPETQQFADFVNKLGLNLKLYFSFHAYA 877
NRN+D+ F GAG SSNPC + Y G + SE E + DFVN G N+K + S H+Y+
Sbjct: 253 PNRNWDAGFGGAGASSNPCSETYHGKFPNSEVEVKSIVDFVNDHG-NIKAFISIHSYS 309
>sp|P00730|CBPA1_BOVIN Carboxypeptidase A1 precursor
Length = 419
Score = 157 bits (398), Expect = 3e-38
Identities = 101/298 (33%), Positives = 157/298 (52%), Gaps = 8/298 (2%)
Frame = +2
Query: 8 GYKVIEVNLKTEYEIKFILQLT--EKYEADIWKGPSKVISTHVMLSP-KYFNDFTEALKK 178
G++V+ + E E++ + +L E + D W+GP + S + P L+
Sbjct: 22 GHQVLRITAADEAEVQTVKELEDLEHLQLDFWRGPGQPGSPIDVRVPFPSLQAVKVFLEA 81
Query: 179 DGIEFKIILENVEDAINKESFMNTNVRLFKLFKKEGPNVNDHFATY---EEIMQWISFLT 349
GI ++I++E+V+ +++E ++F + ++ATY +EI ++ L
Sbjct: 82 HGIRYRIMIEDVQSLLDEEQ-----EQMFASQSRARSTNTFNYATYHTLDEIYDFMDLLV 136
Query: 350 NKY-SFVTSNSYGKSYEGRDLKYVKISTG-PNRKTILIDGGIHSREWLAVSTVTYMLEKM 523
++ V+ G+SYEGR + +K STG NR I ID GIHSREW+ +T + +K
Sbjct: 137 AEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKF 196
Query: 524 ISDYEVGKPGTLSLLSYYDVYFIPVFNPDGYVFSHTPGNRLWRKNRKPFNYYGKTCYGVD 703
DY P ++L D++ V NPDG+ F+H+ NRLWRK R + C GVD
Sbjct: 197 TEDYGQD-PSFTAILDSMDIFLEIVTNPDGFAFTHSQ-NRLWRKTRSVTS--SSLCVGVD 252
Query: 704 LNRNFDSQFAGAGTSSNPCDDIYRGPYAFSEPETQQFADFVNKLGLNLKLYFSFHAYA 877
NRN+D+ F AG SS+PC + Y G YA SE E + DFV G N K + S H+Y+
Sbjct: 253 ANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKDHG-NFKAFLSIHSYS 309
>sp|Q9UI42|CBPA4_HUMAN Carboxypeptidase A4 precursor (Carboxypeptidase A3)
Length = 421
Score = 155 bits (392), Expect = 1e-37
Identities = 96/300 (32%), Positives = 155/300 (51%), Gaps = 10/300 (3%)
Frame = +2
Query: 8 GYKVIEVNLKTEYEIKFILQL--TEKYEADIWKGPSKVISTHVMLSPKY-FNDFTEALKK 178
G +V+ +N++ EI + QL + + + WK PS +L P F L+
Sbjct: 23 GDQVLRINVRNGDEISKLSQLVNSNNLKLNFWKSPSSFNRPVDVLVPSVSLQAFKSFLRS 82
Query: 179 DGIEFKIILENVEDAI-NKESFMNTNVRLFKLFKKEGPNVNDHFATYEEIMQWISFLTNK 355
G+E+ + +E+++ + N++ M N +E + N ++ Y + + N
Sbjct: 83 QGLEYAVTIEDLQALLDNEDDEMQHNEG------QERSSNNFNYGAYHSLEAIYHEMDNI 136
Query: 356 YS----FVTSNSYGKSYEGRDLKYVKISTGPN--RKTILIDGGIHSREWLAVSTVTYMLE 517
+ G S+E R + +K STG R + ++ GIHSREW++ +T +
Sbjct: 137 AADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIHSREWISQATAIWTAR 196
Query: 518 KMISDYEVGKPGTLSLLSYYDVYFIPVFNPDGYVFSHTPGNRLWRKNRKPFNYYGKTCYG 697
K++SDY+ P S+L D++ +PV NPDGYV++ T NRLWRK R G +C G
Sbjct: 197 KIVSDYQ-RDPAITSILEKMDIFLLPVANPDGYVYTQTQ-NRLWRKTRS--RNPGSSCIG 252
Query: 698 VDLNRNFDSQFAGAGTSSNPCDDIYRGPYAFSEPETQQFADFVNKLGLNLKLYFSFHAYA 877
D NRN+++ FAG G S NPC ++Y GP+A SE E + DF+ K G N K + H+Y+
Sbjct: 253 ADPNRNWNASFAGKGASDNPCSEVYHGPHANSEVEVKSVVDFIQKHG-NFKGFIDLHSYS 311
>sp|Q8WXQ8|CBPA5_HUMAN Carboxypeptidase A5 precursor
Length = 436
Score = 154 bits (389), Expect = 3e-37
Identities = 101/300 (33%), Positives = 159/300 (53%), Gaps = 8/300 (2%)
Frame = +2
Query: 2 YDGYKVIEVNLKTEYEIKFI--LQLTEKYEADIWKGPSKVISTHVMLSP-KYFNDFTEAL 172
+ G +V+ V K E ++ + L+ + + D W+GP++ M P D L
Sbjct: 37 FTGDQVLRVLAKDEKQLSLLGDLEGLKPQKVDFWRGPARPSLPVDMRVPFSELKDIKAYL 96
Query: 173 KKDGIEFKIILENVEDAINKESFMNTNVRLFKLFKKEGPNVNDHFATYEEIMQWISFLTN 352
+ G+ + I++++++ +++E R +L + + T EEI WI
Sbjct: 97 ESHGLAYSIMIKDIQVLLDEERQAMAKSR--RLERSTNSFSYSSYHTLEEIYSWIDNFVM 154
Query: 353 KYSFVTSN-SYGKSYEGRDLKYVKISTGPNRK-TILIDGGIHSREWLAVSTVTYMLEKMI 526
++S + S G S+E + + +K STG +R I ID GIHSREW+ +T + K++
Sbjct: 155 EHSDIVSKIQIGNSFENQSILVLKFSTGGSRHPAIWIDTGIHSREWITHATGIWTANKIV 214
Query: 527 SDYEVGKPGTLS-LLSYYDVYFIPVFNPDGYVFSHTPGNRLWRKNR--KPFNYYGKTCYG 697
SDY GK L+ +L+ D++ V NPDG+ F+H+ NRLWRKN+ +P G C G
Sbjct: 215 SDY--GKDRVLTDILNAMDIFIELVTNPDGFAFTHSM-NRLWRKNKSIRP----GIFCIG 267
Query: 698 VDLNRNFDSQFAGAGTSSNPCDDIYRGPYAFSEPETQQFADFVNKLGLNLKLYFSFHAYA 877
VDLNRN+ S F G G++SNPC + Y GP SEPE +F+ G N K S H+Y+
Sbjct: 268 VDLNRNWKSGFGGNGSNSNPCSETYHGPSPQSEPEVAAIVNFITAHG-NFKALISIHSYS 326
>sp|Q8N4T0|CBPA6_HUMAN Carboxypeptidase A6 precursor (Carboxypeptidase B)
Length = 437
Score = 150 bits (378), Expect = 6e-36
Identities = 97/300 (32%), Positives = 159/300 (53%), Gaps = 8/300 (2%)
Frame = +2
Query: 2 YDGYKVIEVNLKTEYEIKFILQLTEKYEADIWKGPSKV------ISTHVMLSPKYFNDFT 163
Y G KVI KTE E + +++ + + D+W+ PS + T V +
Sbjct: 37 YAGDKVIRFIPKTEEEAYALKKISYQLKVDLWQ-PSSISYVSEGTVTDVHIPQNGSRALL 95
Query: 164 EALKKDGIEFKIILENVEDAINKESFMNTNVRLFKLFKKEGPNVNDHFATYEEIMQWISF 343
L++ I++K+++E+++ + K S ++T L G N + + + EEI W+
Sbjct: 96 AFLQEANIQYKVLIEDLQKTLEKGSSLHTQRNRRSL---SGYNY-EVYHSLEEIQNWMHH 151
Query: 344 LTNKYS-FVTSNSYGKSYEGRDLKYVKISTGPN-RKTILIDGGIHSREWLAVSTVTYMLE 517
L +S + S G+SYEGR L +K+ ++ + ID GIH+REW+ + + ++
Sbjct: 152 LNKTHSGLIHMFSIGRSYEGRCLFILKLGRRSRLKRAVWIDCGIHAREWIGPAFCQWFVK 211
Query: 518 KMISDYEVGKPGTLSLLSYYDVYFIPVFNPDGYVFSHTPGNRLWRKNRKPFNYYGKTCYG 697
+ + Y+ P +L++ Y +PVFN DGY FS T +R WRK R + + C G
Sbjct: 212 EALLTYK-SDPAMRKMLNHLYFYIMPVFNVDGYHFSWT-NDRFWRKTRSRNSRF--RCRG 267
Query: 698 VDLNRNFDSQFAGAGTSSNPCDDIYRGPYAFSEPETQQFADFVNKLGLNLKLYFSFHAYA 877
VD NRN+ ++ G S +PCDD Y GP+ SEPE + A+F+ K +++ Y SFHAYA
Sbjct: 268 VDANRNWKVKWCDEGASMHPCDDTYCGPFPESEPEVKAVANFLRKHRKHIRAYLSFHAYA 327
>sp|Q7TPZ8|CBPA1_MOUSE Carboxypeptidase A1 precursor
Length = 419
Score = 149 bits (377), Expect = 8e-36
Identities = 93/299 (31%), Positives = 161/299 (53%), Gaps = 9/299 (3%)
Frame = +2
Query: 8 GYKVIEVNLKTEYEIKFILQLTE--KYEADIWKGPSKV-ISTHVMLSPKYFNDFTEALKK 178
G++V+ ++ E +++ + +L E + D W+ P++ + V + L+
Sbjct: 22 GHQVLRISATDEAQVQKVRELEELEHLKLDFWRDPARAGLPIDVRVPFPTIQSVKAFLEY 81
Query: 179 DGIEFKIILENVEDAINKESFMNTNVRLFKLFKKEGPNVND-HFATY---EEIMQWISFL 346
I ++I++E+V+ +++E + F+ + + ++ATY +EI +++ L
Sbjct: 82 HDISYEIMIEDVQSLLDEEK------QQMSAFQARALSTDAFNYATYHTLDEIYEFMDLL 135
Query: 347 TNKY-SFVTSNSYGKSYEGRDLKYVKISTG-PNRKTILIDGGIHSREWLAVSTVTYMLEK 520
++ V+ G ++EGR + +K STG NR I ID GIHSREW+ ++ + +K
Sbjct: 136 VTEHPQLVSKIQIGSTFEGRPINVLKFSTGGTNRPAIWIDTGIHSREWVTQASGVWFAKK 195
Query: 521 MISDYEVGKPGTLSLLSYYDVYFIPVFNPDGYVFSHTPGNRLWRKNRKPFNYYGKTCYGV 700
+ DY +P ++L D++ V NPDG+V++H NR+WRK R + G C GV
Sbjct: 196 ITKDYGQ-EPTLTAILDNMDIFLEIVTNPDGFVYTHKT-NRMWRKTRS--HTEGSLCVGV 251
Query: 701 DLNRNFDSQFAGAGTSSNPCDDIYRGPYAFSEPETQQFADFVNKLGLNLKLYFSFHAYA 877
D NRN+D+ F G SSNPC + YRG + SE E + DFV G N+K + S H+Y+
Sbjct: 252 DPNRNWDAAFGMPGASSNPCSETYRGKFPNSEVEVKSIVDFVTSHG-NIKAFISIHSYS 309
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,068,358
Number of Sequences: 369166
Number of extensions: 2202687
Number of successful extensions: 6003
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5873
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8694177530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)