Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_F09
(798 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q26065|ACT_PLAMG Actin, adductor muscle 526 e-149
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 526 e-149
sp|P30163|ACT2_ONCVO Actin-2 525 e-149
sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cyt... 525 e-149
sp|P41340|ACT3_LIMPO Actin-3 525 e-149
sp|P92176|ACT2_LUMTE Actin-2 525 e-149
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 525 e-149
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 525 e-149
sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin) 525 e-149
sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin) >gi|... 525 e-149
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 526 bits (1355), Expect = e-149
Identities = 257/266 (96%), Positives = 263/266 (98%)
Frame = +1
Query: 1 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 180
DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 181 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 360
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 144
Query: 361 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 540
ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 541 AEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQ 720
AEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERFRCPE+LFQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQ 264
Query: 721 PSFLGLESVGIHETTYNSIMKCDVDI 798
PSFLG+ES GIHETTYNSIMKCDVDI
Sbjct: 265 PSFLGMESAGIHETTYNSIMKCDVDI 290
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 526 bits (1354), Expect = e-149
Identities = 257/266 (96%), Positives = 262/266 (98%)
Frame = +1
Query: 1 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 180
DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 24 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 83
Query: 181 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 360
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 84 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 143
Query: 361 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 540
ASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 144 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 203
Query: 541 AEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQ 720
AEREIVRDIKEKLCY+ALDF+ EM TAS+SSSLEKSYELPDGQVITIGNERFRCPEALFQ
Sbjct: 204 AEREIVRDIKEKLCYVALDFEQEMATASSSSSLEKSYELPDGQVITIGNERFRCPEALFQ 263
Query: 721 PSFLGLESVGIHETTYNSIMKCDVDI 798
PSFLG+ES GIHETTYNSIMKCDVDI
Sbjct: 264 PSFLGMESSGIHETTYNSIMKCDVDI 289
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 525 bits (1353), Expect = e-149
Identities = 255/266 (95%), Positives = 262/266 (98%)
Frame = +1
Query: 1 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 180
DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 181 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 360
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 361 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 540
ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 541 AEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQ 720
AEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVIT+GNERFRCPEALFQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQ 264
Query: 721 PSFLGLESVGIHETTYNSIMKCDVDI 798
PSFLG+ES GIHETTYNSIMKCD+DI
Sbjct: 265 PSFLGMESAGIHETTYNSIMKCDIDI 290
>sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cytoplasmic beta actin)
Length = 375
Score = 525 bits (1352), Expect = e-149
Identities = 256/266 (96%), Positives = 262/266 (98%)
Frame = +1
Query: 1 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 180
DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 24 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 83
Query: 181 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 360
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 84 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 143
Query: 361 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 540
ASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 144 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 203
Query: 541 AEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQ 720
AEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQ
Sbjct: 204 AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQ 263
Query: 721 PSFLGLESVGIHETTYNSIMKCDVDI 798
PSFLG+ES GIHETTYNSIMKCDVDI
Sbjct: 264 PSFLGMESCGIHETTYNSIMKCDVDI 289
>sp|P41340|ACT3_LIMPO Actin-3
Length = 376
Score = 525 bits (1352), Expect = e-149
Identities = 256/266 (96%), Positives = 262/266 (98%)
Frame = +1
Query: 1 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 180
DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 181 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 360
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 361 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 540
ASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 541 AEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQ 720
AEREIVRDIKEKLCY+ALDFD EM TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFDQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQ 264
Query: 721 PSFLGLESVGIHETTYNSIMKCDVDI 798
PSFLG+ES GIHETTYNSIMKCD+DI
Sbjct: 265 PSFLGMESSGIHETTYNSIMKCDIDI 290
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 525 bits (1352), Expect = e-149
Identities = 257/266 (96%), Positives = 262/266 (98%)
Frame = +1
Query: 1 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 180
DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 181 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 360
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 144
Query: 361 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 540
ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 541 AEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQ 720
AEREIVRDIKEKLCY+ALDF+ EM TASASSSLEKSYELPDGQVITIGNERFRCPEA+F
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMNTASASSSLEKSYELPDGQVITIGNERFRCPEAMFH 264
Query: 721 PSFLGLESVGIHETTYNSIMKCDVDI 798
SFLG+ESVGIHETTYNSIMKCDVDI
Sbjct: 265 ASFLGMESVGIHETTYNSIMKCDVDI 290
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 525 bits (1352), Expect = e-149
Identities = 255/266 (95%), Positives = 262/266 (98%)
Frame = +1
Query: 1 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 180
DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 181 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 360
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 361 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 540
ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 541 AEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQ 720
AEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQ 264
Query: 721 PSFLGLESVGIHETTYNSIMKCDVDI 798
PSFLG+E+ GIHETTYNSIMKCDVDI
Sbjct: 265 PSFLGMEAAGIHETTYNSIMKCDVDI 290
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 525 bits (1352), Expect = e-149
Identities = 255/266 (95%), Positives = 263/266 (98%)
Frame = +1
Query: 1 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 180
DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 25 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 84
Query: 181 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 360
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Query: 361 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 540
ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 145 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTT 204
Query: 541 AEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQ 720
AEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQ
Sbjct: 205 AEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNERFRCPEALFQ 264
Query: 721 PSFLGLESVGIHETTYNSIMKCDVDI 798
PSFLG+E+ GIHETTYNSIMKCDVDI
Sbjct: 265 PSFLGMEAAGIHETTYNSIMKCDVDI 290
>sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 525 bits (1351), Expect = e-149
Identities = 256/266 (96%), Positives = 262/266 (98%)
Frame = +1
Query: 1 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 180
DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 24 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 83
Query: 181 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 360
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 84 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 143
Query: 361 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 540
ASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 144 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 203
Query: 541 AEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQ 720
AEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQ
Sbjct: 204 AEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQ 263
Query: 721 PSFLGLESVGIHETTYNSIMKCDVDI 798
PSFLG+ES GIHETTYNSIMKCDVDI
Sbjct: 264 PSFLGMESCGIHETTYNSIMKCDVDI 289
>sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin)
sp|P68142|ACT1_FUGRU Actin, cytoplasmic 1 (Beta-actin-1)
Length = 375
Score = 525 bits (1351), Expect = e-149
Identities = 256/266 (96%), Positives = 262/266 (98%)
Frame = +1
Query: 1 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 180
DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME
Sbjct: 24 DDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDME 83
Query: 181 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY 360
KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 84 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 143
Query: 361 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 540
ASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT
Sbjct: 144 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 203
Query: 541 AEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQ 720
AEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQ
Sbjct: 204 AEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQ 263
Query: 721 PSFLGLESVGIHETTYNSIMKCDVDI 798
PSFLG+ES GIHETTYNSIMKCDVDI
Sbjct: 264 PSFLGMESCGIHETTYNSIMKCDVDI 289
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,188,400
Number of Sequences: 369166
Number of extensions: 1866590
Number of successful extensions: 6037
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5894
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7522142940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)