Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_F03
(785 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P04811|HSP83_DROVI Heat shock protein 83 (HSP 82) 357 2e-98
sp|O02192|HSP83_DROAV Heat shock protein 83 (HSP 82) 356 3e-98
sp|P04810|HSP83_DROSI Heat shock protein 83 (HSP 82) 356 5e-98
sp|P02828|HSP83_DROME Heat shock protein 83 (HSP 82) 356 5e-98
sp|P04809|HSP83_DROPS Heat shock protein 83 (HSP 82) 355 6e-98
sp|O16087|HSP83_DROMI Heat shock protein 83 (HSP 82) 354 2e-97
sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86) 347 2e-95
sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86) 347 2e-95
sp|P07901|HS90A_MOUSE Heat shock protein HSP 90-alpha (HSP ... 347 3e-95
sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86) 346 5e-95
>sp|P04811|HSP83_DROVI Heat shock protein 83 (HSP 82)
Length = 374
Score = 357 bits (916), Expect = 2e-98
Identities = 177/211 (83%), Positives = 199/211 (94%)
Frame = +3
Query: 18 DTETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYKSLTDPSVLDTAKE 197
+ ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SDALDKIRY+SLTDPS LD+ KE
Sbjct: 4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKE 63
Query: 198 LMIKVIPDKDAGTLTIIDSGNGMTKADLINNLGTIARSGTKAFMEALQAGADISMIGQFG 377
L IK+IP+K AGTLTIID+G GMTK+DL+NNLGTIA+SGTKAFMEALQAGADISMIGQFG
Sbjct: 64 LYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFG 123
Query: 378 VGFYSSYLVADKVQVISKSNDDEQYLWESSAGGSFTIKNDNSEPLGRGTKIILFMKEDQV 557
VGFYS+YLVADKV V SK+NDDEQY+WESSAGGSFT++ DNSEPLGRGTKI+LF+KEDQ
Sbjct: 124 VGFYSAYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADNSEPLGRGTKIVLFIKEDQT 183
Query: 558 EYLEERKIKDIIKKHSQFIGYPIKLVLEKER 650
+YLEE KIK+I+ KHSQFIGYPIKL++EKER
Sbjct: 184 DYLEESKIKEIVNKHSQFIGYPIKLLVEKER 214
>sp|O02192|HSP83_DROAV Heat shock protein 83 (HSP 82)
Length = 716
Score = 356 bits (914), Expect = 3e-98
Identities = 176/211 (83%), Positives = 199/211 (94%)
Frame = +3
Query: 18 DTETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYKSLTDPSVLDTAKE 197
+ ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SDALDKIRY+SLTDPS LD+ KE
Sbjct: 4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKE 63
Query: 198 LMIKVIPDKDAGTLTIIDSGNGMTKADLINNLGTIARSGTKAFMEALQAGADISMIGQFG 377
L IK+IP+K AGTLTIID+G GMTK+DL+NNLGTIA+SGTKAFMEALQAGADISMIGQFG
Sbjct: 64 LYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFG 123
Query: 378 VGFYSSYLVADKVQVISKSNDDEQYLWESSAGGSFTIKNDNSEPLGRGTKIILFMKEDQV 557
VGFYS+YLVADKV V SK+NDDEQY+WESSAGGSFT++ DNSEPLGRGTKI+L++KEDQ
Sbjct: 124 VGFYSAYLVADKVTVTSKNNDDEQYIWESSAGGSFTVRADNSEPLGRGTKIVLYIKEDQT 183
Query: 558 EYLEERKIKDIIKKHSQFIGYPIKLVLEKER 650
+YLEE KIK+I+ KHSQFIGYPIKL++EKER
Sbjct: 184 DYLEESKIKEIVNKHSQFIGYPIKLLVEKER 214
>sp|P04810|HSP83_DROSI Heat shock protein 83 (HSP 82)
Length = 375
Score = 356 bits (913), Expect = 5e-98
Identities = 176/211 (83%), Positives = 199/211 (94%)
Frame = +3
Query: 18 DTETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYKSLTDPSVLDTAKE 197
+ ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SDALDKIRY+SLTDPS LD+ KE
Sbjct: 4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKE 63
Query: 198 LMIKVIPDKDAGTLTIIDSGNGMTKADLINNLGTIARSGTKAFMEALQAGADISMIGQFG 377
L IK+IP+K AGTLTIID+G GMTK+DL+NNLGTIA+SGTKAFMEALQAGADISMIGQFG
Sbjct: 64 LYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFG 123
Query: 378 VGFYSSYLVADKVQVISKSNDDEQYLWESSAGGSFTIKNDNSEPLGRGTKIILFMKEDQV 557
VGFYS+YLVADKV V SK+NDDEQY+WESSAGGSFT++ DNSEPLGRGTKI+L++KEDQ
Sbjct: 124 VGFYSAYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADNSEPLGRGTKIVLYIKEDQT 183
Query: 558 EYLEERKIKDIIKKHSQFIGYPIKLVLEKER 650
+YLEE KIK+I+ KHSQFIGYPIKL++EKER
Sbjct: 184 DYLEESKIKEIVNKHSQFIGYPIKLLVEKER 214
>sp|P02828|HSP83_DROME Heat shock protein 83 (HSP 82)
Length = 717
Score = 356 bits (913), Expect = 5e-98
Identities = 176/211 (83%), Positives = 199/211 (94%)
Frame = +3
Query: 18 DTETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYKSLTDPSVLDTAKE 197
+ ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SDALDKIRY+SLTDPS LD+ KE
Sbjct: 4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKE 63
Query: 198 LMIKVIPDKDAGTLTIIDSGNGMTKADLINNLGTIARSGTKAFMEALQAGADISMIGQFG 377
L IK+IP+K AGTLTIID+G GMTK+DL+NNLGTIA+SGTKAFMEALQAGADISMIGQFG
Sbjct: 64 LYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFG 123
Query: 378 VGFYSSYLVADKVQVISKSNDDEQYLWESSAGGSFTIKNDNSEPLGRGTKIILFMKEDQV 557
VGFYS+YLVADKV V SK+NDDEQY+WESSAGGSFT++ DNSEPLGRGTKI+L++KEDQ
Sbjct: 124 VGFYSAYLVADKVTVTSKNNDDEQYVWESSAGGSFTVRADNSEPLGRGTKIVLYIKEDQT 183
Query: 558 EYLEERKIKDIIKKHSQFIGYPIKLVLEKER 650
+YLEE KIK+I+ KHSQFIGYPIKL++EKER
Sbjct: 184 DYLEESKIKEIVNKHSQFIGYPIKLLVEKER 214
>sp|P04809|HSP83_DROPS Heat shock protein 83 (HSP 82)
Length = 375
Score = 355 bits (912), Expect = 6e-98
Identities = 175/211 (82%), Positives = 199/211 (94%)
Frame = +3
Query: 18 DTETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYKSLTDPSVLDTAKE 197
+ ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SDALDKIRY+SLTDPS LD+ KE
Sbjct: 4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKE 63
Query: 198 LMIKVIPDKDAGTLTIIDSGNGMTKADLINNLGTIARSGTKAFMEALQAGADISMIGQFG 377
L IK+IP+K AGTLTIID+G GMTK+DL+NNLGTIA+SGTKAFMEALQAGADISMIGQFG
Sbjct: 64 LYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFG 123
Query: 378 VGFYSSYLVADKVQVISKSNDDEQYLWESSAGGSFTIKNDNSEPLGRGTKIILFMKEDQV 557
VGFYS+YL+AD+V V SK+NDDEQY+WESSAGGSFT+K DNSEPLGRGTKI+L++KEDQ
Sbjct: 124 VGFYSAYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADNSEPLGRGTKIVLYIKEDQT 183
Query: 558 EYLEERKIKDIIKKHSQFIGYPIKLVLEKER 650
+YLEE KIK+I+ KHSQFIGYPIKL++EKER
Sbjct: 184 DYLEESKIKEIVNKHSQFIGYPIKLLVEKER 214
>sp|O16087|HSP83_DROMI Heat shock protein 83 (HSP 82)
Length = 269
Score = 354 bits (908), Expect = 2e-97
Identities = 175/211 (82%), Positives = 198/211 (93%)
Frame = +3
Query: 18 DTETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYKSLTDPSVLDTAKE 197
+ ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SDALDKIRY+SLTDPS LD+ KE
Sbjct: 4 EAETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKE 63
Query: 198 LMIKVIPDKDAGTLTIIDSGNGMTKADLINNLGTIARSGTKAFMEALQAGADISMIGQFG 377
L IK+IP+K AGTLTIID+G GMTK+DL+NNLGTIA+SGTKAFMEALQAGADISMIGQFG
Sbjct: 64 LYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFG 123
Query: 378 VGFYSSYLVADKVQVISKSNDDEQYLWESSAGGSFTIKNDNSEPLGRGTKIILFMKEDQV 557
VGFYS+YL+AD+V V SK+NDDEQY+WESSAGGSFT+K DNSEPLGRGTKI L++KEDQ
Sbjct: 124 VGFYSAYLIADRVTVTSKNNDDEQYVWESSAGGSFTVKADNSEPLGRGTKIXLYIKEDQT 183
Query: 558 EYLEERKIKDIIKKHSQFIGYPIKLVLEKER 650
+YLEE KIK+I+ KHSQFIGYPIKL++EKER
Sbjct: 184 DYLEESKIKEIVNKHSQFIGYPIKLLVEKER 214
>sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86)
Length = 733
Score = 347 bits (890), Expect = 2e-95
Identities = 173/215 (80%), Positives = 194/215 (90%)
Frame = +3
Query: 6 MSDADTETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYKSLTDPSVLD 185
M + + ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY+SLTDPS LD
Sbjct: 12 MEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLD 71
Query: 186 TAKELMIKVIPDKDAGTLTIIDSGNGMTKADLINNLGTIARSGTKAFMEALQAGADISMI 365
+ KEL I +IP+K TLTI+D+G GMTKADLINNLGTIA+SGTKAFMEALQAGADISMI
Sbjct: 72 SGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMI 131
Query: 366 GQFGVGFYSSYLVADKVQVISKSNDDEQYLWESSAGGSFTIKNDNSEPLGRGTKIILFMK 545
GQFGVGFYS+YLVA+KV VI+K NDDEQY WESSAGGSFT++ D EP+GRGTK+IL +K
Sbjct: 132 GQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLK 191
Query: 546 EDQVEYLEERKIKDIIKKHSQFIGYPIKLVLEKER 650
EDQ EYLEER+IK+I+KKHSQFIGYPI L +EKER
Sbjct: 192 EDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKER 226
>sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86)
Length = 719
Score = 347 bits (890), Expect = 2e-95
Identities = 173/215 (80%), Positives = 194/215 (90%)
Frame = +3
Query: 6 MSDADTETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYKSLTDPSVLD 185
M + + ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY+SLTDPS LD
Sbjct: 1 MEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLD 60
Query: 186 TAKELMIKVIPDKDAGTLTIIDSGNGMTKADLINNLGTIARSGTKAFMEALQAGADISMI 365
+ KEL I +IP+K TLTI+D+G GMTKADLINNLGTIA+SGTKAFMEALQAGADISMI
Sbjct: 61 SGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMI 120
Query: 366 GQFGVGFYSSYLVADKVQVISKSNDDEQYLWESSAGGSFTIKNDNSEPLGRGTKIILFMK 545
GQFGVGFYS+YLVA+KV VI+K NDDEQY WESSAGGSFT++ D EP+GRGTK+IL +K
Sbjct: 121 GQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLK 180
Query: 546 EDQVEYLEERKIKDIIKKHSQFIGYPIKLVLEKER 650
EDQ EYLEER+IK+I+KKHSQFIGYPI L +EKER
Sbjct: 181 EDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKER 215
>sp|P07901|HS90A_MOUSE Heat shock protein HSP 90-alpha (HSP 86) (Tumor specific
transplantation 86 kDa antigen) (TSTA)
Length = 733
Score = 347 bits (889), Expect = 3e-95
Identities = 173/215 (80%), Positives = 193/215 (89%)
Frame = +3
Query: 6 MSDADTETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYKSLTDPSVLD 185
M + + ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY+SLTDPS LD
Sbjct: 12 MEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLD 71
Query: 186 TAKELMIKVIPDKDAGTLTIIDSGNGMTKADLINNLGTIARSGTKAFMEALQAGADISMI 365
+ KEL I +IP K TLTI+D+G GMTKADLINNLGTIA+SGTKAFMEALQAGADISMI
Sbjct: 72 SGKELHINLIPSKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMI 131
Query: 366 GQFGVGFYSSYLVADKVQVISKSNDDEQYLWESSAGGSFTIKNDNSEPLGRGTKIILFMK 545
GQFGVGFYS+YLVA+KV VI+K NDDEQY WESSAGGSFT++ D EP+GRGTK+IL +K
Sbjct: 132 GQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLK 191
Query: 546 EDQVEYLEERKIKDIIKKHSQFIGYPIKLVLEKER 650
EDQ EYLEER+IK+I+KKHSQFIGYPI L +EKER
Sbjct: 192 EDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKER 226
>sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86)
Length = 732
Score = 346 bits (887), Expect = 5e-95
Identities = 172/215 (80%), Positives = 194/215 (90%)
Frame = +3
Query: 6 MSDADTETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYKSLTDPSVLD 185
M + + ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY++LTDPS LD
Sbjct: 12 MEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLD 71
Query: 186 TAKELMIKVIPDKDAGTLTIIDSGNGMTKADLINNLGTIARSGTKAFMEALQAGADISMI 365
+ KEL I +IP+K TLTI+D+G GMTKADLINNLGTIA+SGTKAFMEALQAGADISMI
Sbjct: 72 SGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMI 131
Query: 366 GQFGVGFYSSYLVADKVQVISKSNDDEQYLWESSAGGSFTIKNDNSEPLGRGTKIILFMK 545
GQFGVGFYS+YLVA+KV VI+K NDDEQY WESSAGGSFT++ D EP+GRGTK+IL +K
Sbjct: 132 GQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLK 191
Query: 546 EDQVEYLEERKIKDIIKKHSQFIGYPIKLVLEKER 650
EDQ EYLEER+IK+I+KKHSQFIGYPI L +EKER
Sbjct: 192 EDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKER 226
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,741,889
Number of Sequences: 369166
Number of extensions: 1378180
Number of successful extensions: 4119
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3943
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7405750800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)