Planarian EST Database


Dr_sW_012_E19

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_012_E19
         (882 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30038|AL4A1_HUMAN  Delta-1-pyrroline-5-carboxylate dehyd...   344   2e-94
sp|Q8CHT0|AL4A1_MOUSE  Delta-1-pyrroline-5-carboxylate dehyd...   342   6e-94
sp|O74766|PUT2_SCHPO  Probable delta-1-pyrroline-5-carboxyla...   281   2e-75
sp|Q9P8I0|PUT2_EMENI  Delta-1-pyrroline-5-carboxylate dehydr...   268   1e-71
sp|P78568|PUT2_AGABI  Delta-1-pyrroline-5-carboxylate dehydr...   267   3e-71
sp|P07275|PUT2_YEAST  Delta-1-pyrroline-5-carboxylate dehydr...   251   2e-66
sp|P39634|ROCA_BACSU  1-pyrroline-5-carboxylate dehydrogenas...   128   2e-29
sp|Q4L966|ROCA_STAHJ  1-pyrroline-5-carboxylate dehydrogenas...   125   2e-28
sp|Q8ERF4|ROCA_OCEIH  1-pyrroline-5-carboxylate dehydrogenas...   124   5e-28
sp|Q8CN04|ROCA_STAES  1-pyrroline-5-carboxylate dehydrogenas...   124   5e-28
>sp|P30038|AL4A1_HUMAN Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
           precursor (P5C dehydrogenase) (Aldehyde dehydrogenase
           4A1)
          Length = 563

 Score =  344 bits (883), Expect = 2e-94
 Identities = 160/276 (57%), Positives = 213/276 (77%)
 Frame = +1

Query: 4   PFDHKKNLAQFYFADEKIINKAIKSCLEAREKWDKTPLKDRAQIFLKAADLMSKTYRPHL 183
           PF+H   +A+F +AD+ ++NKAI++ L AR++WD  P+ DRAQIFLKAAD++S   R  +
Sbjct: 84  PFNHGHKVAKFCYADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEI 143

Query: 184 VATTMLGQAKTIFQAEIDAAVELIDFLRFNTEAAAKVTKYKPISTPGVINEVIWRGMEGF 363
           +A TM+GQ KT+ QAEIDAA ELIDF RFN + A ++   +PIS P   N  ++RG+EGF
Sbjct: 144 LAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGF 203

Query: 364 WAAITPFNFTAIGGNLAATPALMGNSVLWKPTDSSILSNYTIYKILRECNLPPGVINFVP 543
            AAI+PFNFTAIGGNLA  PALMGN VLWKP+D+++L++Y +Y+ILRE  LPP +I FVP
Sbjct: 204 VAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVP 263

Query: 544 CAGSVFGKVITLNPNLAGINFTGSVNTFRVLLEEVGKNIYEYSSYPRLIGECGGKNFHFV 723
             G +FG  +T + +L GINFTGSV TF+ L ++V +N+  + ++PRL GECGGKNFHFV
Sbjct: 264 ADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFV 323

Query: 724 HETADLDNVSVSTVRSAFEYGGQKCSACSRLYAPEA 831
           H +AD+++V   T+RSAFEYGGQKCSACSRLY P +
Sbjct: 324 HRSADVESVVSGTLRSAFEYGGQKCSACSRLYVPHS 359
>sp|Q8CHT0|AL4A1_MOUSE Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
           precursor (P5C dehydrogenase) (Aldehyde dehydrogenase
           4A1)
          Length = 562

 Score =  342 bits (878), Expect = 6e-94
 Identities = 159/276 (57%), Positives = 211/276 (76%)
 Frame = +1

Query: 4   PFDHKKNLAQFYFADEKIINKAIKSCLEAREKWDKTPLKDRAQIFLKAADLMSKTYRPHL 183
           PF+H   +A+F +AD+ ++N+AI + L AR++WD  P+ DRAQ+FLKAAD++S   R  +
Sbjct: 83  PFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEV 142

Query: 184 VATTMLGQAKTIFQAEIDAAVELIDFLRFNTEAAAKVTKYKPISTPGVINEVIWRGMEGF 363
           +A TM+GQ KT+ QAEIDAA ELIDF RFN + A ++   +PIS P   N  ++RG+EGF
Sbjct: 143 LAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGF 202

Query: 364 WAAITPFNFTAIGGNLAATPALMGNSVLWKPTDSSILSNYTIYKILRECNLPPGVINFVP 543
            AAI+PFNFTAIGGNLA  PALMGN VLWKP+D+++L++Y +Y+ILRE  LPP +I FVP
Sbjct: 203 VAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVP 262

Query: 544 CAGSVFGKVITLNPNLAGINFTGSVNTFRVLLEEVGKNIYEYSSYPRLIGECGGKNFHFV 723
             G  FG  +T + +L GINFTGSV TF+ L  +V +N+  + ++PRL GECGGKNFHFV
Sbjct: 263 ADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFV 322

Query: 724 HETADLDNVSVSTVRSAFEYGGQKCSACSRLYAPEA 831
           H +AD+D+V   T+RSAFEYGGQKCSACSRLY P++
Sbjct: 323 HSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKS 358
>sp|O74766|PUT2_SCHPO Probable delta-1-pyrroline-5-carboxylate dehydrogenase (P5C
           dehydrogenase)
          Length = 548

 Score =  281 bits (718), Expect = 2e-75
 Identities = 141/275 (51%), Positives = 192/275 (69%), Gaps = 3/275 (1%)
 Frame = +1

Query: 4   PFDHKKNLAQFYFADEKIINKAIKSCLEAREKWDKTPLKDRAQIFLKAADLMSKTYRPHL 183
           PF+HKK +A+++ A  K +  AI++ L  ++ W+  P  DR+ IFLKAA L+S  YR  L
Sbjct: 65  PFEHKKVVARYHRAGAKHVEDAIEAALRGKKVWESLPFADRSAIFLKAAHLISTKYRYKL 124

Query: 184 VATTMLGQAKTIFQAEIDAAVELIDFLRFNTEAAAKV-TKYKPISTPGVINEVIWRGMEG 360
           +A TM+GQ K I+QAEIDA +E+IDFLRFNT+ A+++     P +TPGV N + +R +EG
Sbjct: 125 MAATMIGQGKNIWQAEIDAGMEIIDFLRFNTKYASELYASQPPENTPGVWNRMEYRPLEG 184

Query: 361 FWAAITPFNFTAIGGNLAATPALMGNSVLWKPTDSSILSNYTIYKILRECNLPPGVINFV 540
           F  AITPFNFTAI GNLAA P LMGN VL KP+D ++LS+Y +Y+I RE  LP G + F+
Sbjct: 185 FVYAITPFNFTAIAGNLAAAPLLMGNVVLMKPSDHAVLSSYIVYQIFREAGLPAGALQFI 244

Query: 541 PCAGSVFGKVITLNPNLAGINFTGSVNTFRVLLEEVGKNIY--EYSSYPRLIGECGGKNF 714
           P       KV   +P  AG++FTGS   FR L   +G+N+   +Y +YP+++GE GGKNF
Sbjct: 245 PGDAVEVSKVCFNHPEFAGLHFTGSTAVFRSLWGTIGENVANGKYRTYPKIVGETGGKNF 304

Query: 715 HFVHETADLDNVSVSTVRSAFEYGGQKCSACSRLY 819
           H VH +A++ +  V+ VR+AFEY GQKCSA SRLY
Sbjct: 305 HLVHSSAEIKSAVVNAVRAAFEYQGQKCSALSRLY 339
>sp|Q9P8I0|PUT2_EMENI Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
           precursor (P5C dehydrogenase)
          Length = 572

 Score =  268 bits (686), Expect = 1e-71
 Identities = 138/268 (51%), Positives = 180/268 (67%), Gaps = 3/268 (1%)
 Frame = +1

Query: 25  LAQFYFADEKIINKAIKSCLEAREKWDKTPLKDRAQIFLKAADLMSKTYRPHLVATTMLG 204
           +A +  A  K +  AI+S LEAR+ W  TP  DRA +FLKAADL+S  YR  ++A TM G
Sbjct: 94  VATYSNATAKDVQAAIESALEARKSWASTPFADRASVFLKAADLISTKYRYDVMAVTMHG 153

Query: 205 QAKTIFQAEIDAAVELIDFLRFNTEAAAKVTKYKPIS-TPGVINEVIWRGMEGFWAAITP 381
           Q K  +QAEID+A EL DF RF  + A  +   +P+   PGV N V +R +EGF  AI+P
Sbjct: 154 QGKNAWQAEIDSAAELCDFFRFGVKYAEDLYAQQPVHHAPGVWNRVEYRPLEGFVYAISP 213

Query: 382 FNFTAIGGNLAATPALMGNSVLWKPTDSSILSNYTIYKILRECNLPPGVINFVPCAGSVF 561
           FNFTAIGGNLA  PALMGN V+WKP+ S+I SN+ +++IL E  LP  VI FVP      
Sbjct: 214 FNFTAIGGNLAGAPALMGNVVVWKPSPSAIASNWLVHQILLEAGLPKNVIQFVPGEAEEV 273

Query: 562 GKVITLNPNLAGINFTGSVNTFRVLLEEVGKNIY--EYSSYPRLIGECGGKNFHFVHETA 735
            K +  +P+ A ++FTGS N FR L  ++   +   +Y SYPR++GE GGKNFH +H++A
Sbjct: 274 TKTVLDHPDFAALHFTGSTNVFRNLYGQISTRVAAGKYRSYPRIVGETGGKNFHLIHKSA 333

Query: 736 DLDNVSVSTVRSAFEYGGQKCSACSRLY 819
           D+ N +V TVR AFEY GQKCSA SR+Y
Sbjct: 334 DIRNAAVQTVRGAFEYQGQKCSATSRVY 361
>sp|P78568|PUT2_AGABI Delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase)
          Length = 546

 Score =  267 bits (682), Expect = 3e-71
 Identities = 130/273 (47%), Positives = 180/273 (65%), Gaps = 1/273 (0%)
 Frame = +1

Query: 4   PFDHKKNLAQFYFADEKIINKAIKSCLEAREKWDKTPLKDRAQIFLKAADLMSKTYRPHL 183
           P DH ++L  F+    +++ KA    L+A++ W+  P  DRA IFLKAADL S  YR  L
Sbjct: 67  PHDHARHLCTFHEGSPELVEKATCGALQAKDGWETMPWNDRAAIFLKAADLASGKYRYKL 126

Query: 184 VATTMLGQAKTIFQAEIDAAVELIDFLRFNTEAAAKV-TKYKPISTPGVINEVIWRGMEG 360
           +A TMLGQ K  +QAEIDAA EL DF RF      ++  +  P + PG  N   +R +EG
Sbjct: 127 MAATMLGQGKNTWQAEIDAAAELADFFRFGVSYVEELYAQQPPKNAPGCWNRTEYRPLEG 186

Query: 361 FWAAITPFNFTAIGGNLAATPALMGNSVLWKPTDSSILSNYTIYKILRECNLPPGVINFV 540
           F  A++PFNFTAIGGNL  +PAL+GN V+WKP  ++  SNY ++KIL E  +PPGVI F+
Sbjct: 187 FVLAVSPFNFTAIGGNLPGSPALVGNVVVWKPAPAATYSNYLVFKILSEAGVPPGVIQFI 246

Query: 541 PCAGSVFGKVITLNPNLAGINFTGSVNTFRVLLEEVGKNIYEYSSYPRLIGECGGKNFHF 720
           P  G+   +    +PN   ++FTGS N F+ L +++  N+ +Y  YPR++GE GGKN+H 
Sbjct: 247 P-GGAEIVQAAIQSPNFRSLHFTGSTNVFKSLWKDISSNLDKYKVYPRIVGETGGKNWHV 305

Query: 721 VHETADLDNVSVSTVRSAFEYGGQKCSACSRLY 819
           +H++A++ N  + +VR AFEY GQKCSA SRLY
Sbjct: 306 IHKSAEVRNAVLQSVRGAFEYQGQKCSALSRLY 338
>sp|P07275|PUT2_YEAST Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
           precursor (P5C dehydrogenase)
          Length = 575

 Score =  251 bits (640), Expect = 2e-66
 Identities = 126/279 (45%), Positives = 178/279 (63%), Gaps = 3/279 (1%)
 Frame = +1

Query: 4   PFDHKKNLAQFYFADEKIINKAIKSCLEAREKWDKTPLKDRAQIFLKAADLMSKTYRPHL 183
           P +H++ LA    A EK +  A+K+  +A++ W   P  DR+ IFLKAADL+S  YR  +
Sbjct: 84  PANHQQVLANVTQATEKDVMNAVKAAKDAKKDWYNLPFYDRSAIFLKAADLISTKYRYDM 143

Query: 184 VATTMLGQAKTIFQAEIDAAVELIDFLRFNTEAAAKVTKYKPI-STPGVINEVIWRGMEG 360
           +A TMLGQ K ++QAEID   EL DF R+  + A+ +   +P+ S  G  N+  +R +EG
Sbjct: 144 LAATMLGQGKNVYQAEIDCITELSDFFRYYVKYASDLYAQQPVESADGTWNKAEYRPLEG 203

Query: 361 FWAAITPFNFTAIGGNLAATPALMGNSVLWKPTDSSILSNYTIYKILRECNLPPGVINFV 540
           F  A++PFNFTAI  NL   PALMGN+V+WKP+ ++ LSNY +  +L E  LP GVINF+
Sbjct: 204 FVYAVSPFNFTAIAANLIGAPALMGNTVVWKPSQTAALSNYLLMTVLEEAGLPKGVINFI 263

Query: 541 PCAGSVFGKVITLNPNLAGINFTGSVNTFRVLLEEVGKNIYE--YSSYPRLIGECGGKNF 714
           P         +  + +   ++FTGS N F+ L  ++   + E  Y  YPR+IGE GGKNF
Sbjct: 264 PGDPVQVTDQVLADKDFGALHFTGSTNVFKSLYGKIQSGVVEGKYRDYPRIIGETGGKNF 323

Query: 715 HFVHETADLDNVSVSTVRSAFEYGGQKCSACSRLYAPEA 831
           H VH +A++ +  +ST+R  FE+ GQKCSA SRLY PE+
Sbjct: 324 HLVHPSANISHAVLSTIRGTFEFQGQKCSAASRLYLPES 362
>sp|P39634|ROCA_BACSU 1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase)
          Length = 515

 Score =  128 bits (322), Expect = 2e-29
 Identities = 91/268 (33%), Positives = 141/268 (52%), Gaps = 11/268 (4%)
 Frame = +1

Query: 43  ADEKIINKAIKSCLEAREKWDKTPLKDRAQIFLKAADLMSKTYRPHLVATTMLGQA-KTI 219
           AD+++  KA+++ L+A + W K   + RA I  KAA ++ +  R H  ++ ++ +A K  
Sbjct: 70  ADQELAEKAMQAALQAFDSWKKQRPEHRANILFKAAAILRR--RKHEFSSYLVKEAGKPW 127

Query: 220 FQAEIDAAVELIDFLRFNTEAAAKVTKYKPI-STPGVINEVIWRGMEGFWAAITPFNFT- 393
            +A+ D A E IDFL F      K+ +  P+ S  G +N+  +  + G    I+PFNF  
Sbjct: 128 KEADADTA-EAIDFLEFYARQMLKLKEGAPVKSRAGEVNQYHYEAL-GVGIVISPFNFPL 185

Query: 394 AIGGNLAATPALMGNSVLWKPTDSSILSNYTIYKILRECNLPPGVINFVPCAGSVFGKVI 573
           AI    A    + GN++L KP D++ +      +++ E  LP GV+N++P  G+  G  +
Sbjct: 186 AIMAGTAVAAIVTGNTILLKPADAAPVVAAKFVEVMEEAGLPNGVLNYIPGDGAEIGDFL 245

Query: 574 TLNPNLAGINFTGSVNTFRVLLEEVGKNIYEYSS--------YPRLIGECGGKNFHFVHE 729
             +P    ++FTGS          VG  IYE ++          R+I E GGK+   V +
Sbjct: 246 VEHPKTRFVSFTGS--------RAVGCRIYERAAKVQPGQKWLKRVIAEMGGKDTVLVDK 297

Query: 730 TADLDNVSVSTVRSAFEYGGQKCSACSR 813
            ADLD  + S V SAF Y GQKCSA SR
Sbjct: 298 DADLDLAASSIVYSAFGYSGQKCSAGSR 325
>sp|Q4L966|ROCA_STAHJ 1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase)
          Length = 514

 Score =  125 bits (313), Expect = 2e-28
 Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 10/280 (3%)
 Frame = +1

Query: 4   PFDHKKNLAQFYFADEKIINKAIKSCLEAREKWDKTPLKDRAQIFLKAADLMSKTYRPHL 183
           P +  + +A+   A ++ ++KA +S  +A + W +   KDRA++ L+ A ++ +  R   
Sbjct: 57  PANTSELIAKVSKATKEDVDKAFESSNKAYKAWRQWSHKDRAELLLRVAAIIRR--RKEE 114

Query: 184 VATTMLGQAKTIFQAEIDAAVELIDFLRFNTEAAAKVTKYKPI-STPGVINEVIWRGMEG 360
           ++  M+ +A   +   +  A E IDF+ +   +  ++   KP+    G  N+  ++ + G
Sbjct: 115 ISAVMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMELADGKPVLDREGEHNKYFYKSI-G 173

Query: 361 FWAAITPFNFT-AIGGNLAATPALMGNSVLWKPTDSSILSNYTIYKILRECNLPPGVINF 537
               I P+NF  AI       P + GN+VL KP + ++L+ Y + +IL E  LP GV+NF
Sbjct: 174 TGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTVLTAYKLIEILEEAGLPKGVVNF 233

Query: 538 VPCAGSVFGKVITLNPNLAGINFTGSVNTFRVLLEEVGKNIYEYSS--------YPRLIG 693
           VP      G  +  + +   + FTGS  T        G  IYE S+          R+I 
Sbjct: 234 VPGDPKEIGDYLVDSVHTHFVTFTGSRAT--------GTRIYERSAVVQEGQTFLKRVIA 285

Query: 694 ECGGKNFHFVHETADLDNVSVSTVRSAFEYGGQKCSACSR 813
           E GGK+   V E  D D  + S + SAF + GQKCSACSR
Sbjct: 286 EMGGKDAIVVDENIDTDLAAESIITSAFGFSGQKCSACSR 325
>sp|Q8ERF4|ROCA_OCEIH 1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase)
          Length = 515

 Score =  124 bits (310), Expect = 5e-28
 Identities = 91/266 (34%), Positives = 139/266 (52%), Gaps = 3/266 (1%)
 Frame = +1

Query: 43  ADEKIINKAIKSCLEAREKWDKTPLKDRAQIFLKAADLMSKTYRPHLVATTMLGQA-KTI 219
           A ++ I +A  S  EA ++W     +DRA++  +AA ++ +  R H  +  +   A K  
Sbjct: 70  ATKQHIEEAFTSAKEAFKEWKSWSAEDRARVLYRAAAIVRR--RKHEFSAWLSYDAGKPW 127

Query: 220 FQAEIDAAVELIDFLRFNTEAAAKVTKYKPIST-PGVINEVIWRGMEGFWAAITPFNFT- 393
            QA+ D A E IDFL +      ++ K KP++  P   N+  ++ + G    I P+NF  
Sbjct: 128 DQADGDTA-EGIDFLEYYARHMVELEKGKPLADRPNEDNKYFYQPL-GPGVVIPPWNFAF 185

Query: 394 AIGGNLAATPALMGNSVLWKPTDSSILSNYTIYKILRECNLPPGVINFVPCAGSVFGKVI 573
           AI       P + GN VL KP++++ +  Y + ++L E  LP GV+NFVP   +  G  +
Sbjct: 186 AIVCGTTVAPIVAGNPVLLKPSENTPVIAYKLVEVLEEAGLPKGVLNFVPGDPAEIGDYL 245

Query: 574 TLNPNLAGINFTGSVNTFRVLLEEVGKNIYEYSSYPRLIGECGGKNFHFVHETADLDNVS 753
             + +   INFTGS  T   + E   K     +   R++ E GGK+   V E+ADLD  +
Sbjct: 246 VDHKDTHFINFTGSRATGVRIFERATKIQDGQTHLKRIVAEMGGKDTIIVDESADLDLAA 305

Query: 754 VSTVRSAFEYGGQKCSACSRLYAPEA 831
            S V SAF + GQKCSACSR    E+
Sbjct: 306 ESIVHSAFGFSGQKCSACSRAVIHES 331
>sp|Q8CN04|ROCA_STAES 1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase)
          Length = 514

 Score =  124 bits (310), Expect = 5e-28
 Identities = 88/280 (31%), Positives = 136/280 (48%), Gaps = 10/280 (3%)
 Frame = +1

Query: 4   PFDHKKNLAQFYFADEKIINKAIKSCLEAREKWDKTPLKDRAQIFLKAADLMSKTYRPHL 183
           P +  + +A+   A +  I KA +S   A + W K   KDRA++ L+ A ++ +  R   
Sbjct: 57  PANTSQLIAKVSKATQDDIEKAFESANHAYQSWKKWSHKDRAELLLRVAAIIRR--RKEE 114

Query: 184 VATTMLGQAKTIFQAEIDAAVELIDFLRFNTEAAAKVTKYKPI-STPGVINEVIWRGMEG 360
           ++  M+ +A   +   +  A E IDF+ +   +  ++   KP+    G  N   ++ + G
Sbjct: 115 ISAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMELADGKPVLDREGEHNRYFYKPI-G 173

Query: 361 FWAAITPFNFT-AIGGNLAATPALMGNSVLWKPTDSSILSNYTIYKILRECNLPPGVINF 537
               I P+NF  AI       P + GN+VL KP + ++L+ Y + +IL E  LP GV+NF
Sbjct: 174 TGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTVLTAYKLMEILEEAGLPQGVVNF 233

Query: 538 VPCAGSVFGKVITLNPNLAGINFTGSVNTFRVLLEEVGKNIYEYSS--------YPRLIG 693
           VP      G  +  + +   + FTGS  T        G  IYE S+          R+I 
Sbjct: 234 VPGDPKEIGDYLVDHKDTHFVTFTGSRAT--------GTRIYERSAVVQEGQQFLKRVIA 285

Query: 694 ECGGKNFHFVHETADLDNVSVSTVRSAFEYGGQKCSACSR 813
           E GGK+   V    D D  + + V SAF + GQKCSACSR
Sbjct: 286 EMGGKDAIVVDNNVDTDLAAEAIVTSAFGFSGQKCSACSR 325
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,435,614
Number of Sequences: 369166
Number of extensions: 1975603
Number of successful extensions: 5932
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5766
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8790245790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)