Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_E18
(864 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 560 e-159
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 560 e-159
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 559 e-159
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 559 e-159
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 559 e-159
sp|P92176|ACT2_LUMTE Actin-2 558 e-159
sp|P12716|ACTC_PISOC Actin, cytoplasmic 558 e-159
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 558 e-159
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 558 e-159
sp|P30163|ACT2_ONCVO Actin-2 558 e-159
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 560 bits (1442), Expect = e-159
Identities = 273/288 (94%), Positives = 283/288 (98%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYEL 540
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYEL 243
Query: 541 PDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGG 720
PDGQVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGG
Sbjct: 244 PDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303
Query: 721 STMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLS 864
STM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLS
Sbjct: 304 STMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLS 351
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 560 bits (1442), Expect = e-159
Identities = 273/288 (94%), Positives = 284/288 (98%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYEL 540
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYEL 243
Query: 541 PDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGG 720
PDGQVITIGNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGG
Sbjct: 244 PDGQVITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303
Query: 721 STMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLS 864
STM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLS
Sbjct: 304 STMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLS 351
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 559 bits (1440), Expect = e-159
Identities = 272/288 (94%), Positives = 283/288 (98%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYEL 540
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYEL 243
Query: 541 PDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGG 720
PDGQVITIGNERFRCPEA++QPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG
Sbjct: 244 PDGQVITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303
Query: 721 STMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLS 864
STM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLS
Sbjct: 304 STMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLS 351
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 559 bits (1440), Expect = e-159
Identities = 273/288 (94%), Positives = 282/288 (97%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYEL 540
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA+ SSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYEL 243
Query: 541 PDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGG 720
PDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG
Sbjct: 244 PDGQVITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303
Query: 721 STMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLS 864
STM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLS
Sbjct: 304 STMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLS 351
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 559 bits (1440), Expect = e-159
Identities = 272/288 (94%), Positives = 283/288 (98%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYEL 540
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYEL 243
Query: 541 PDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGG 720
PDGQVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGG
Sbjct: 244 PDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303
Query: 721 STMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLS 864
STM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLS
Sbjct: 304 STMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLS 351
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 558 bits (1439), Expect = e-159
Identities = 274/288 (95%), Positives = 283/288 (98%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYEL 540
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TASASSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTASASSSLEKSYEL 243
Query: 541 PDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGG 720
PDGQVITIGNERFRCPEA+F SFLG+ESVGIHETTYNSIMKCDVDIRKDLYAN VLSGG
Sbjct: 244 PDGQVITIGNERFRCPEAMFHASFLGMESVGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303
Query: 721 STMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLS 864
+TM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLS
Sbjct: 304 TTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLS 351
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 558 bits (1438), Expect = e-159
Identities = 272/288 (94%), Positives = 283/288 (98%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN PAMYVAIQAVLSLYASGRTTGIV DSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYEL 540
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYEL 243
Query: 541 PDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGG 720
PDGQVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG
Sbjct: 244 PDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303
Query: 721 STMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLS 864
STM+PGIADRMQKE++ALAPPTMKIKI+APPERKYSVWIGGSILASLS
Sbjct: 304 STMFPGIADRMQKEVTALAPPTMKIKIIAPPERKYSVWIGGSILASLS 351
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 558 bits (1437), Expect = e-159
Identities = 272/288 (94%), Positives = 282/288 (97%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYEL 540
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYEL 243
Query: 541 PDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGG 720
PDGQVITIGNERFRCPEA FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGG
Sbjct: 244 PDGQVITIGNERFRCPEATFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGG 303
Query: 721 STMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLS 864
STM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLS
Sbjct: 304 STMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLS 351
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 558 bits (1437), Expect = e-159
Identities = 274/288 (95%), Positives = 282/288 (97%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 63 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 361 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYEL 540
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TAS+SSSLEKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATASSSSSLEKSYEL 242
Query: 541 PDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGG 720
PDGQVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVLSGG 302
Query: 721 STMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLS 864
+TMYPGIADRMQKEI+ALAP TMKIKI+APPERKYSVWIGGSILASLS
Sbjct: 303 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 350
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 558 bits (1437), Expect = e-159
Identities = 273/288 (94%), Positives = 282/288 (97%)
Frame = +1
Query: 1 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 180
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 181 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 360
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG
Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 183
Query: 361 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYEL 540
RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYEL
Sbjct: 184 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 243
Query: 541 PDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGG 720
PDGQVIT+GNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCD+DIRKDLYAN VLSGG
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGG 303
Query: 721 STMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLS 864
STMYPGIADRMQKEI+ALAP TMKIKI+APPERKYSVWIGGSILASLS
Sbjct: 304 STMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,077,132
Number of Sequences: 369166
Number of extensions: 2034973
Number of successful extensions: 6810
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6631
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)