Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_C02
(851 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 295 1e-79
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 294 2e-79
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 293 5e-79
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 288 2e-77
sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein) 287 3e-77
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 287 3e-77
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 285 1e-76
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 284 2e-76
sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (C... 284 2e-76
sp|P61277|CATK_MACMU Cathepsin K precursor >gi|47117667|sp|... 283 3e-76
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 295 bits (754), Expect = 1e-79
Identities = 154/282 (54%), Positives = 194/282 (68%), Gaps = 5/282 (1%)
Frame = +1
Query: 19 QINEELNDEWNLYKTRYQKSYLSIVELTRRIIWEENLRYIQHHNLEYDLGKHSYYLGVNE 198
+ ++ N +W+ +K+ +++ Y + E RR +WE+N+R IQ HN EY GKH + + +N
Sbjct: 20 KFDQTFNAQWHQWKSTHRRLYGTNEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNA 79
Query: 199 YADLTHEEFKIKFLGLKPINRNYSRTIFMPPENMDNYPKSVDWRKKGYVTPVKNQGQCGS 378
+ D+T+EEF+ G + R +F P M PK+VDWR+KG VTPVKNQGQCGS
Sbjct: 80 FGDMTNEEFRQIVNGYRHQKHKKGR-LFQEPL-MLQIPKTVDWREKGCVTPVKNQGQCGS 137
Query: 379 CWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQYIQKY-GLE 555
CW+FS +G LEGQ F K +L+SLSEQ LVDCS D N GCNGGLMD AFQYI++ GL+
Sbjct: 138 CWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLD 197
Query: 556 SEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISVAIDASRPSF 735
SE YPY A DG CKY + VA+ TGFVDI + EK L KAVATVGPISVA+DAS PS
Sbjct: 198 SEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSL 256
Query: 736 QLYKGGIYNEVNCSSNNLDHGVLAVGYGAEG----KNHFWIV 849
Q Y GIY E NCSS +LDHGVL VGYG EG K+ +W+V
Sbjct: 257 QFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLV 298
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 294 bits (753), Expect = 2e-79
Identities = 156/282 (55%), Positives = 193/282 (68%), Gaps = 5/282 (1%)
Frame = +1
Query: 19 QINEELNDEWNLYKTRYQKSYLSIVELTRRIIWEENLRYIQHHNLEYDLGKHSYYLGVNE 198
+ ++ + EW+ +K+ +++ Y + E RR IWE+N+R IQ HN EY G+H + + +N
Sbjct: 20 KFDQTFSAEWHQWKSTHRRLYGTNEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNA 79
Query: 199 YADLTHEEFKIKFLGLKPINRNYSRTIFMPPENMDNYPKSVDWRKKGYVTPVKNQGQCGS 378
+ D+T+EEF+ G + R +F P M PKSVDWR+KG VTPVKNQGQCGS
Sbjct: 80 FGDMTNEEFRQVVNGYRHQKHKKGR-LFQEPL-MLKIPKSVDWREKGCVTPVKNQGQCGS 137
Query: 379 CWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQYIQKY-GLE 555
CW+FS +G LEGQ F K +L+SLSEQ LVDCS N GCNGGLMD AFQYI++ GL+
Sbjct: 138 CWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLD 197
Query: 556 SEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISVAIDASRPSF 735
SE YPY A DG CKY + VA+ TGFVDI + EK L KAVATVGPISVA+DAS PS
Sbjct: 198 SEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSL 256
Query: 736 QLYKGGIYNEVNCSSNNLDHGVLAVGYGAEG----KNHFWIV 849
Q Y GIY E NCSS NLDHGVL VGYG EG KN +W+V
Sbjct: 257 QFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLV 298
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 293 bits (749), Expect = 5e-79
Identities = 150/282 (53%), Positives = 191/282 (67%), Gaps = 5/282 (1%)
Frame = +1
Query: 19 QINEELNDEWNLYKTRYQKSYLSIVELTRRIIWEENLRYIQHHNLEYDLGKHSYYLGVNE 198
+ ++ L+ +W +K +++ Y + E RR +WE+N++ I+ HN EY GKH + + +N
Sbjct: 20 KFDQNLDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNA 79
Query: 199 YADLTHEEFKIKFLGLKPINRNYSRTIFMPPENMDNYPKSVDWRKKGYVTPVKNQGQCGS 378
+ D+T+EEF+ + +G + +F P +D PKSVDWRKKGYVTPVKNQ QCGS
Sbjct: 80 FGDMTNEEFR-QMMGCFRNQKFRKGKVFREPLFLD-LPKSVDWRKKGYVTPVKNQKQCGS 137
Query: 379 CWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQYIQKY-GLE 555
CW+FS TGALEGQ FRK +LVSLSEQ LVDCS+ N GCNGG M AFQY+++ GL+
Sbjct: 138 CWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLD 197
Query: 556 SEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISVAIDASRPSF 735
SE YPY A+D CKY VA+ TGF + G EK L KAVATVGPISVA+DA SF
Sbjct: 198 SEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSF 257
Query: 736 QLYKGGIYNEVNCSSNNLDHGVLAVGYGAEGKN----HFWIV 849
Q YK GIY E +CSS NLDHGVL VGYG EG N +W+V
Sbjct: 258 QFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLV 299
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 288 bits (736), Expect = 2e-77
Identities = 153/288 (53%), Positives = 192/288 (66%), Gaps = 5/288 (1%)
Frame = +1
Query: 1 SSAFKFQINEELNDEWNLYKTRYQKSYLSIVELTRRIIWEENLRYIQHHNLEYDLGKHSY 180
S+A KF ++ LN +W +K +++ Y E RR +WE+N++ I+ HN EY GKH +
Sbjct: 16 SAAPKF--DQSLNAQWYQWKATHRRLYGMNEEGWRRAVWEKNMKMIELHNREYSQGKHGF 73
Query: 181 YLGVNEYADLTHEEFKIKFLGLKPINRNYSRTIFMPPENMDNYPKSVDWRKKGYVTPVKN 360
+ +N + D+T+EEF+ G + N+ + + PKSVDWR+KGYVTPVKN
Sbjct: 74 TMAMNAFGDMTNEEFRQVMNGFQ--NQKHKKGKMFQEPLFAEIPKSVDWREKGYVTPVKN 131
Query: 361 QGQCGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQYIQ 540
QGQCGSCW+FS TGALEGQ FRK +LVSLSEQ LVDCS+ N GCNGGLMDNAF+Y++
Sbjct: 132 QGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVK 191
Query: 541 -KYGLESEADYPYTAMD-GPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISVAI 714
GL+SE YPY D C Y A+ TGFVD+ + EK L KAVAT+GPISVAI
Sbjct: 192 DNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQ-REKALMKAVATLGPISVAI 250
Query: 715 DASRPSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEG---KNHFWIV 849
DA SFQ YK GIY + +CSS +LDHGVL VGYG EG N FWIV
Sbjct: 251 DAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIV 298
>sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein)
Length = 329
Score = 287 bits (734), Expect = 3e-77
Identities = 147/284 (51%), Positives = 190/284 (66%), Gaps = 3/284 (1%)
Frame = +1
Query: 7 AFKFQINEELNDEWNLYKTRYQKSYLSIV-ELTRRIIWEENLRYIQHHNLEYDLGKHSYY 183
+F E L+ +W L+K Y K Y S V E++RR+IWE+NL++I HNLE LG H+Y
Sbjct: 13 SFALHPEEILDTQWELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYE 72
Query: 184 LGVNEYADLTHEEFKIKFLGLK-PINRNYSRTIFMPPENMDNYPKSVDWRKKGYVTPVKN 360
L +N D+T EE K GLK P +R++S P+ P S+D+RKKGYVTPVKN
Sbjct: 73 LAMNHLGDMTSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKN 132
Query: 361 QGQCGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQYIQ 540
QGQCGSCW+FS+ GALEGQ +K +L++LS Q LVDC + N GC GG M NAFQY+Q
Sbjct: 133 QGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NYGCGGGYMTNAFQYVQ 190
Query: 541 KY-GLESEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISVAID 717
+ G++SE YPY D C Y+ T A C G+ +I +GNEK L +AVA VGP+SVAID
Sbjct: 191 RNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAID 250
Query: 718 ASRPSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEGKNHFWIV 849
AS SFQ Y G+Y + NCSS+N++H VLAVGYG + N WI+
Sbjct: 251 ASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWII 294
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 287 bits (734), Expect = 3e-77
Identities = 152/283 (53%), Positives = 188/283 (66%), Gaps = 6/283 (2%)
Frame = +1
Query: 19 QINEELNDEWNLYKTRYQKSYLSIVELTRRIIWEENLRYIQHHNLEYDLGKHSYYLGVNE 198
+++ L+ W+ +K +++ Y E RR +WE+N + I HN EY GKH++ + +N
Sbjct: 20 KLDPNLDAHWHQWKATHRRLYGMNEEEWRRAVWEKNKKIIDLHNQEYSEGKHAFRMAMNA 79
Query: 199 YADLTHEEFKIKFLGLKPINRNYSRTIFMPPENMDNYPKSVDWRKKGYVTPVKNQGQCGS 378
+ D+T+EEF+ G + N+ + + + + PKSVDW KKGYVTPVKNQGQCGS
Sbjct: 80 FGDMTNEEFRQVMNGFQ--NQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGS 137
Query: 379 CWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQYIQ-KYGLE 555
CW+FS TGALEGQ FRK +LVSLSEQ LVDCS+ N GCNGGLMDNAFQYI+ GL+
Sbjct: 138 CWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLD 197
Query: 556 SEADYPYTAMD-GPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISVAIDASRPS 732
SE YPY A D C Y A+ TGFVDI + EK L KAVATVGPISVAIDA S
Sbjct: 198 SEESYPYLATDTNSCNYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHTS 256
Query: 733 FQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEG----KNHFWIV 849
FQ YK GIY + +CS +LDHGVL VGYG EG N FWIV
Sbjct: 257 FQFYKSGIYYDPDCSCKDLDHGVLVVGYGFEGTDSNNNKFWIV 299
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 285 bits (729), Expect = 1e-76
Identities = 148/282 (52%), Positives = 188/282 (66%), Gaps = 10/282 (3%)
Frame = +1
Query: 34 LNDEWNLYKTRYQKSYLSIVELTRRI-IWEENLRYIQHHNLEYDLGKHSYYLGVNEYADL 210
+ +EW+ YK +++K+Y + VE R+ I+ EN I HN + GK SY LG+N+YAD+
Sbjct: 24 IKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADM 83
Query: 211 THEEFKIKFLGLKPINRNYSR-------TIFMPPENMDNYPKSVDWRKKGYVTPVKNQGQ 369
H EFK G R R ++PP ++ PKSVDWR+ G VT VK+QG
Sbjct: 84 LHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHV-TVPKSVDWREHGAVTGVKDQGH 142
Query: 370 CGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQYIQ-KY 546
CGSCW+FS+TGALEGQHFRK LVSLSEQ LVDCS Y NNGCNGGLMDNAF+YI+
Sbjct: 143 CGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNG 202
Query: 547 GLESEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISVAIDASR 726
G+++E YPY +D C ++ + A TGFVDI +G+E+ + KAVAT+GP+SVAIDAS
Sbjct: 203 GIDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASH 262
Query: 727 PSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGA-EGKNHFWIV 849
SFQLY G+YNE C NLDHGVL VGYG E +W+V
Sbjct: 263 ESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLV 304
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 284 bits (726), Expect = 2e-76
Identities = 150/280 (53%), Positives = 183/280 (65%), Gaps = 5/280 (1%)
Frame = +1
Query: 25 NEELNDEWNLYKTRYQKSYLSIVELTRRIIWEENLRYIQHHNLEYDLGKHSYYLGVNEYA 204
+ L +W +K + + Y E RR +WE+N++ I+ HN EY GKHS+ + +N +
Sbjct: 22 DHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFG 81
Query: 205 DLTHEEFKIKFLGLKPINRNYSRTIFMPPENMDNYPKSVDWRKKGYVTPVKNQGQCGSCW 384
D+T EEF+ G + NR + P+SVDWR+KGYVTPVKNQGQCGSCW
Sbjct: 82 DMTSEEFRQVMNGFQ--NRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCW 139
Query: 385 SFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQYIQ-KYGLESE 561
+FS TGALEGQ FRK +L+SLSEQ LVDCS N GCNGGLMD AFQY+Q GL+SE
Sbjct: 140 AFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSE 199
Query: 562 ADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISVAIDASRPSFQL 741
YPY A + CKY+ VA+ TGFVDI K EK L KAVATVGPISVAIDA SF
Sbjct: 200 ESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLF 258
Query: 742 YKGGIYNEVNCSSNNLDHGVLAVGYGAEG----KNHFWIV 849
YK GIY E +CSS ++DHGVL VGYG E N +W+V
Sbjct: 259 YKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLV 298
>sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (Cathepsin X) (Cathepsin O2)
Length = 329
Score = 284 bits (726), Expect = 2e-76
Identities = 146/284 (51%), Positives = 190/284 (66%), Gaps = 3/284 (1%)
Frame = +1
Query: 7 AFKFQINEELNDEWNLYKTRYQKSYLSIV-ELTRRIIWEENLRYIQHHNLEYDLGKHSYY 183
+F E L+ W L+K ++K Y + V E++RR+IWE+NL+YI HNLE LG H+Y
Sbjct: 13 SFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72
Query: 184 LGVNEYADLTHEEFKIKFLGLK-PINRNYSRTIFMPPENMDNYPKSVDWRKKGYVTPVKN 360
L +N D+T EE K GLK P++ + S PE P SVD+RKKGYVTPVKN
Sbjct: 73 LAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKN 132
Query: 361 QGQCGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQYIQ 540
QGQCGSCW+FS+ GALEGQ +K +L++LS Q LVDC + N+GC GG M NAFQY+Q
Sbjct: 133 QGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQ 190
Query: 541 KY-GLESEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISVAID 717
K G++SE YPY + C Y+ T A C G+ +I +GNEK L +AVA VGP+SVAID
Sbjct: 191 KNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAID 250
Query: 718 ASRPSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEGKNHFWIV 849
AS SFQ Y G+Y + +C+S+NL+H VLAVGYG + N WI+
Sbjct: 251 ASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWII 294
>sp|P61277|CATK_MACMU Cathepsin K precursor
sp|P61276|CATK_MACFA Cathepsin K precursor
Length = 329
Score = 283 bits (725), Expect = 3e-76
Identities = 146/284 (51%), Positives = 190/284 (66%), Gaps = 3/284 (1%)
Frame = +1
Query: 7 AFKFQINEELNDEWNLYKTRYQKSYLSIV-ELTRRIIWEENLRYIQHHNLEYDLGKHSYY 183
+F E L+ W L+K ++K Y S V E++RR+IWE+NL+YI HNLE LG H+Y
Sbjct: 13 SFALYPEEILDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72
Query: 184 LGVNEYADLTHEEFKIKFLGLK-PINRNYSRTIFMPPENMDNYPKSVDWRKKGYVTPVKN 360
L +N D+T+EE K GLK P + + S P+ P SVD+RKKGYVTPVKN
Sbjct: 73 LAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKN 132
Query: 361 QGQCGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQYIQ 540
QGQCGSCW+FS+ GALEGQ +K +L++LS Q LVDC + N+GC GG M NAFQY+Q
Sbjct: 133 QGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQ 190
Query: 541 KY-GLESEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISVAID 717
K G++SE YPY + C Y+ T A C G+ +I +GNEK L +AVA VGP+SVAID
Sbjct: 191 KNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAID 250
Query: 718 ASRPSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEGKNHFWIV 849
AS SFQ Y G+Y + +C+S+NL+H VLAVGYG + N WI+
Sbjct: 251 ASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWII 294
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.317 0.135 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,848,103
Number of Sequences: 369166
Number of extensions: 2018659
Number of successful extensions: 6243
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5680
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)