Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_B23
(807 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial... 369 e-102
sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial... 365 e-100
sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial p... 365 e-100
sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial... 365 e-100
sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial... 362 e-100
sp|O93344|AL1A2_CHICK Retinal dehydrogenase 2 (RalDH2) (RAL... 358 7e-99
sp|O94788|AL1A2_HUMAN Retinal dehydrogenase 2 (RalDH2) (RAL... 357 2e-98
sp|Q63639|AL1A2_RAT Retinal dehydrogenase 2 (RalDH2) (RALDH... 356 4e-98
sp|Q62148|AL1A2_MOUSE Retinal dehydrogenase 2 (RalDH2) (RAL... 356 5e-98
sp|P30837|AL1B1_HUMAN Aldehyde dehydrogenase X, mitochondri... 353 3e-97
>sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(ALDHI) (ALDH-E2)
Length = 517
Score = 369 bits (947), Expect = e-102
Identities = 172/258 (66%), Positives = 208/258 (80%), Gaps = 1/258 (0%)
Frame = +3
Query: 3 GKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVMKTAEQTPLT 182
GK IP+ G++ +TRHE VG+CGQIIPWNFPLLMQAWKLGPAL GN VVMK AEQTPLT
Sbjct: 158 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 217
Query: 183 ANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKN 362
A YVA+LI EAGFPPGVVNIVPG GP AGAA+ SH +VDK+AFTGSTE+GR+I +
Sbjct: 218 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 277
Query: 363 NIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVE 542
N+KR+TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+E IYD+FVE
Sbjct: 278 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVE 337
Query: 543 AMVAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYF 719
VA AK+++VGNPFD +QGPQVD+ Q KI+ IN+GK EGA+L GG D+GYF
Sbjct: 338 RSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYF 397
Query: 720 VEPTIFSKVNDNMRIARK 773
++PT+F V D M IA++
Sbjct: 398 IQPTVFGDVQDGMTIAKE 415
>sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(AHD-M1) (ALDHI) (ALDH-E2)
Length = 519
Score = 365 bits (936), Expect = e-100
Identities = 170/258 (65%), Positives = 205/258 (79%), Gaps = 1/258 (0%)
Frame = +3
Query: 3 GKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVMKTAEQTPLT 182
GK IP+ G++ +TRHE VG+CGQIIPWNFPLLMQAWKLGPAL GN VVMK AEQTPLT
Sbjct: 160 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 219
Query: 183 ANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKN 362
A YVA+LI EAGFPPGVVNIVPG GP AGAA+ SH VDK+AFTGSTEVG +I +
Sbjct: 220 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSS 279
Query: 363 NIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVE 542
N+KR+TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+E +YD+FVE
Sbjct: 280 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVE 339
Query: 543 AMVAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYF 719
VA AK+++VGNPFD +QGPQVD+ Q KI+ I SG+ EGA+L GG D+GYF
Sbjct: 340 RSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYF 399
Query: 720 VEPTIFSKVNDNMRIARK 773
++PT+F V D M IA++
Sbjct: 400 IQPTVFGDVKDGMTIAKE 417
>sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(ALDH1) (ALDH-E2)
Length = 519
Score = 365 bits (936), Expect = e-100
Identities = 170/258 (65%), Positives = 206/258 (79%), Gaps = 1/258 (0%)
Frame = +3
Query: 3 GKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVMKTAEQTPLT 182
GK IP+ G++ +TRHE VG+CGQIIPWNFPLLMQAWKLGPAL GN VVMK AEQTPLT
Sbjct: 160 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 219
Query: 183 ANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKN 362
A YVA+LI EAGFPPGVVNIVPG GP AGAA+ SH +VDK+AFTGSTEVG +I +
Sbjct: 220 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSS 279
Query: 363 NIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVE 542
N+KR+TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+E +YD+FVE
Sbjct: 280 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVE 339
Query: 543 AMVAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYF 719
VA AK+++VGNPFD +QGPQVD+ Q KI+ I SG+ EGA+L GG D+GYF
Sbjct: 340 RSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYF 399
Query: 720 VEPTIFSKVNDNMRIARK 773
++PT+F V D M IA++
Sbjct: 400 IQPTVFGDVKDGMTIAKE 417
>sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial (ALDH class 2) (ALDH1)
(ALDH-E2)
Length = 500
Score = 365 bits (936), Expect = e-100
Identities = 170/258 (65%), Positives = 206/258 (79%), Gaps = 1/258 (0%)
Frame = +3
Query: 3 GKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVMKTAEQTPLT 182
GK IP+ G++ +TRHE VG+CGQIIPWNFPLLMQAWKLGPAL GN VVMK AEQTPLT
Sbjct: 141 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 200
Query: 183 ANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKN 362
A YVA+LI EAGFPPGVVNIVPG GP AGAA+ SH +VDK+AFTGSTEVG +I +
Sbjct: 201 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSS 260
Query: 363 NIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVE 542
N+KR+TLELGGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+E +YD+FVE
Sbjct: 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVE 320
Query: 543 AMVAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYF 719
VA AK+++VGNPFD +QGPQVD+ Q KI+ I SG+ EGA+L GG D+GYF
Sbjct: 321 RSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYF 380
Query: 720 VEPTIFSKVNDNMRIARK 773
++PT+F V D M IA++
Sbjct: 381 IQPTVFGDVKDGMTIAKE 398
>sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(ALDHI) (ALDH-E2)
Length = 520
Score = 362 bits (929), Expect = e-100
Identities = 167/258 (64%), Positives = 205/258 (79%), Gaps = 1/258 (0%)
Frame = +3
Query: 3 GKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVMKTAEQTPLT 182
GK IP+ G+Y +TRHE VG+CGQIIPWNFPLLMQAWKLGPAL GN VVMK AEQTPLT
Sbjct: 161 GKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 220
Query: 183 ANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKN 362
A YVA+LI EAGFPPGVVN++PG GP AGAA+ SH +VDK+AFTGSTEVG +I K+
Sbjct: 221 ALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKS 280
Query: 363 NIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVE 542
N+KR+TLE+GGKSPNI+++DAD D AV+ +HFALFFN GQCCCAGSR +V+E IY +FVE
Sbjct: 281 NLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVE 340
Query: 543 AMVAEAKTKIVGNPFDD-VDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYF 719
VA AK+++VGNPFD +QGPQVD+ Q K++ I SGK EG +L GG D+GYF
Sbjct: 341 RSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAADRGYF 400
Query: 720 VEPTIFSKVNDNMRIARK 773
++PT+F + D M IA++
Sbjct: 401 IQPTVFGDLQDGMTIAKE 418
>sp|O93344|AL1A2_CHICK Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 358 bits (920), Expect = 7e-99
Identities = 167/258 (64%), Positives = 208/258 (80%), Gaps = 1/258 (0%)
Frame = +3
Query: 3 GKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVMKTAEQTPLT 182
G IP+ G+Y FTRHE +G+CGQIIPWNFPLLM AWK+ PALC GNTVV+K AEQTPL+
Sbjct: 140 GMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLS 199
Query: 183 ANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKN 362
A Y+ +LI EAGFPPGVVNI+PG GP+ GAA+ SH +DKIAFTGSTEVG++I ++
Sbjct: 200 ALYMGALIKEAGFPPGVVNILPGFGPIVGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRS 259
Query: 363 NIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVE 542
N+KR+TLELGGKSPNI+ ADAD D+AV+ +H +FFN GQCC AGSRIYVEE IY++FV
Sbjct: 260 NLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVEESIYEEFVR 319
Query: 543 AMVAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYF 719
V AK ++VG+PFD +QGPQ+DK Q NKI++LI SG +EGA+L GGK LG KG+F
Sbjct: 320 RSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKLECGGKGLGRKGFF 379
Query: 720 VEPTIFSKVNDNMRIARK 773
+EPT+FS V D+MRIA++
Sbjct: 380 IEPTVFSNVTDDMRIAKE 397
>sp|O94788|AL1A2_HUMAN Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 357 bits (916), Expect = 2e-98
Identities = 167/258 (64%), Positives = 208/258 (80%), Gaps = 1/258 (0%)
Frame = +3
Query: 3 GKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVMKTAEQTPLT 182
G IP+ G+Y FTRHE +G+CGQIIPWNFPLLM AWK+ PALC GNTVV+K AEQTPL+
Sbjct: 140 GMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLS 199
Query: 183 ANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKN 362
A Y+ +LI EAGFPPGV+NI+PG GP AGAA+ SH +DKIAFTGSTEVG++I ++
Sbjct: 200 ALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRS 259
Query: 363 NIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVE 542
N+KR+TLELGGKSPNI+ ADAD D+AV+ +H +FFN GQCC AGSRI+VEE IY++FV
Sbjct: 260 NLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVR 319
Query: 543 AMVAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYF 719
V AK +IVG+PFD +QGPQ+DK Q NKI++LI SG +EGA+L GGK LG KG+F
Sbjct: 320 RSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFF 379
Query: 720 VEPTIFSKVNDNMRIARK 773
+EPT+FS V D+MRIA++
Sbjct: 380 IEPTVFSNVTDDMRIAKE 397
>sp|Q63639|AL1A2_RAT Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 356 bits (914), Expect = 4e-98
Identities = 167/258 (64%), Positives = 208/258 (80%), Gaps = 1/258 (0%)
Frame = +3
Query: 3 GKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVMKTAEQTPLT 182
G IP+ G+Y FTRHE +G+CGQIIPWNFPLLM WK+ PALC GNTVV+K AEQTPL+
Sbjct: 140 GMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLS 199
Query: 183 ANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKN 362
A Y+ +LI EAGFPPGVVNI+PG GP AGAA+ SH +DKIAFTGSTEVG++I ++
Sbjct: 200 ALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRS 259
Query: 363 NIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVE 542
N+KR+TLELGGKSPNI+ ADAD D+AV+ +H +FFN GQCC AGSRI+VEE IY++FV+
Sbjct: 260 NLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVK 319
Query: 543 AMVAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYF 719
V AK +IVG+PFD +QGPQ+DK Q NKI++LI SG +EGA+L GGK LG KG+F
Sbjct: 320 RSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFF 379
Query: 720 VEPTIFSKVNDNMRIARK 773
+EPT+FS V D+MRIA++
Sbjct: 380 IEPTVFSNVTDDMRIAKE 397
>sp|Q62148|AL1A2_MOUSE Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 356 bits (913), Expect = 5e-98
Identities = 166/258 (64%), Positives = 208/258 (80%), Gaps = 1/258 (0%)
Frame = +3
Query: 3 GKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVMKTAEQTPLT 182
G IP+ G+Y FTRHE +G+CGQIIPWNFPLLM WK+ PALC GNTVV+K AEQTPL+
Sbjct: 140 GMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLS 199
Query: 183 ANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKN 362
A Y+ +LI EAGFPPGVVNI+PG GP AGAA+ SH +DKIAFTGSTEVG++I ++
Sbjct: 200 ALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRS 259
Query: 363 NIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVE 542
N+KR+TLELGGKSPNI+ ADAD D+AV+ +H +FFN GQCC AGSRI+VEE IY++FV+
Sbjct: 260 NLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVK 319
Query: 543 AMVAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYF 719
V AK +IVG+PFD +QGPQ+DK Q NK+++LI SG +EGA+L GGK LG KG+F
Sbjct: 320 RSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKVLELIQSGVAEGAKLECGGKGLGRKGFF 379
Query: 720 VEPTIFSKVNDNMRIARK 773
+EPT+FS V D+MRIA++
Sbjct: 380 IEPTVFSNVTDDMRIAKE 397
>sp|P30837|AL1B1_HUMAN Aldehyde dehydrogenase X, mitochondrial precursor (ALDH class 2)
Length = 517
Score = 353 bits (906), Expect = 3e-97
Identities = 165/258 (63%), Positives = 205/258 (79%), Gaps = 1/258 (0%)
Frame = +3
Query: 3 GKVIPMRGNYLGFTRHEAVGICGQIIPWNFPLLMQAWKLGPALCMGNTVVMKTAEQTPLT 182
GK IPM G + FTRHE VG+CGQIIPWNFPL+MQ WKL PAL GNTVVMK AEQTPL+
Sbjct: 158 GKTIPMHGQHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLS 217
Query: 183 ANYVASLIAEAGFPPGVVNIVPGMGPVAGAALVSHPNVDKIAFTGSTEVGRIISSECNKN 362
A Y+ASLI EAGFPPGVVNI+ G GP AGAA+ H +VDK+AFTGSTEVG +I +
Sbjct: 218 ALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGDS 277
Query: 363 NIKRLTLELGGKSPNIVLADADFDHAVKSSHFALFFNMGQCCCAGSRIYVEEKIYDKFVE 542
N+KR+TLELGGKSP+IVLADAD +HAV+ H ALFFNMGQCCCAGSR +VEE IY++F+E
Sbjct: 278 NLKRVTLELGGKSPSIVLADADMEHAVEQCHEALFFNMGQCCCAGSRTFVEESIYNEFLE 337
Query: 543 AMVAEAKTKIVGNPFD-DVDQGPQVDKDQLNKIIDLINSGKSEGAQLCTGGKQLGDKGYF 719
V +AK + VGNPF+ D QGPQVDK+Q +++ I G+ EGA+L GG++ G++G+F
Sbjct: 338 RTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLCGGERFGERGFF 397
Query: 720 VEPTIFSKVNDNMRIARK 773
++PT+F V D+MRIA++
Sbjct: 398 IKPTVFGGVQDDMRIAKE 415
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,764,510
Number of Sequences: 369166
Number of extensions: 1778977
Number of successful extensions: 5121
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4761
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7666799535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)