Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_B19
(227 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q06155|VAP1_STRPU Vesicle-associated protein (VAP-1) 57 2e-08
sp||Q09666_2 [Segment 2 of 2] Neuroblast differentiation-as... 50 2e-06
sp||Q09666_1 [Segment 1 of 2] Neuroblast differentiation-as... 46 2e-05
sp|Q60754|MTCO_MOUSE Macrophage receptor MARCO (Macrophage ... 40 0.001
sp|Q9WUB9|MARCO_MESAU Macrophage receptor MARCO (Macrophage... 37 0.011
sp|Q9UEW3|MRCO_HUMAN Macrophage receptor MARCO (Macrophage ... 37 0.014
sp|Q99PG2|OGFR_MOUSE Opioid growth factor receptor (OGFr) (... 33 0.15
sp|Q05722|CA19_MOUSE Collagen alpha 1(IX) chain precursor 33 0.20
sp|P83371|OTO1_ONCKE Otolin-1 precursor 33 0.20
sp|P20850|CA19_RAT Collagen alpha 1(IX) chain 33 0.20
>sp|Q06155|VAP1_STRPU Vesicle-associated protein (VAP-1)
Length = 433
Score = 56.6 bits (135), Expect = 2e-08
Identities = 31/71 (43%), Positives = 41/71 (57%)
Frame = +1
Query: 7 GGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADID 186
GG V P G +DLD+ G L +DID KGP D+ +KGP+ D+ GP D+D
Sbjct: 325 GGDVDLPSGGVDLDVGGGIGGGLG---GGLDIDAKGP--DVDIKGPRVGGDISGP--DLD 377
Query: 187 LKGPKLDVDFD 219
+ GP LD+D D
Sbjct: 378 VSGPDLDIDGD 388
Score = 50.1 bits (118), Expect = 2e-06
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = +1
Query: 10 GKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADIDL 189
G P G + LD+ G L +DID GP D+ +KGPK D+ GP D+D+
Sbjct: 98 GDADLPSGGVGLDVGGGIGGGLG---GGLDIDANGP--DVDIKGPKVGGDISGP--DLDV 150
Query: 190 KGPKLDVDFD 219
GP LD+D D
Sbjct: 151 SGPDLDIDVD 160
Score = 50.1 bits (118), Expect = 2e-06
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = +1
Query: 10 GKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADIDL 189
G P G + LD+ G L +DID GP D+ +KGPK D+ GP D+D+
Sbjct: 205 GDADLPSGGVGLDVGGGIGGGLG---GGLDIDANGP--DVDIKGPKVGGDISGP--DLDV 257
Query: 190 KGPKLDVDFD 219
GP LD+D D
Sbjct: 258 SGPDLDIDVD 267
Score = 47.0 bits (110), Expect = 1e-05
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 29/103 (28%)
Frame = +1
Query: 4 FGGKVKKPK------GEIDLDLNAGADANLDIKKPHVDI--DLKGPKGDIGL-------- 135
FG +K PK G+ D+D+ DA++DI++P +D+ D P G +GL
Sbjct: 62 FGFGLKMPKFGFGGHGKGDIDV----DADVDIERPDLDVSGDADLPSGGVGLDVGGGIGG 117
Query: 136 ----------KGPKADIDLKGPKADIDLKGPKLDV---DFDVD 225
GP D+D+KGPK D+ GP LDV D D+D
Sbjct: 118 GLGGGLDIDANGP--DVDIKGPKVGGDISGPDLDVSGPDLDID 158
Score = 47.0 bits (110), Expect = 1e-05
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 29/103 (28%)
Frame = +1
Query: 4 FGGKVKKPK------GEIDLDLNAGADANLDIKKPHVDI--DLKGPKGDIGL-------- 135
FG +K PK G+ D+D+ DA++DI++P +D+ D P G +GL
Sbjct: 169 FGFGMKMPKFGFGGHGKGDIDV----DADVDIERPDLDVSGDADLPSGGVGLDVGGGIGG 224
Query: 136 ----------KGPKADIDLKGPKADIDLKGPKLDV---DFDVD 225
GP D+D+KGPK D+ GP LDV D D+D
Sbjct: 225 GLGGGLDIDANGP--DVDIKGPKVGGDISGPDLDVSGPDLDID 265
Score = 43.5 bits (101), Expect = 1e-04
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 23/84 (27%)
Frame = +1
Query: 43 LDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADID------------ 186
LD+ G LDI D+D+KGPK + GP D+D+ GP DID
Sbjct: 7 LDVGGGLRGGLDIDAKGPDVDIKGPKVGGDISGP--DLDVSGPDLDIDGGGKKGKGGFGF 64
Query: 187 -LKGPK----------LDVDFDVD 225
LK PK +DVD DVD
Sbjct: 65 GLKMPKFGFGGHGKGDIDVDADVD 88
Score = 42.0 bits (97), Expect = 4e-04
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 24/98 (24%)
Frame = +1
Query: 4 FGGKVKKPKGEIDLDLNAGA-----DANLDIKKPHVDIDLKGPKGDIGLK---------G 141
FGG KG+ID+D + G D + KP + D+ P G + L G
Sbjct: 292 FGGH---GKGDIDVDADGGVVIPEGDIKVKTGKPDIGGDVDLPSGGVDLDVGGGIGGGLG 348
Query: 142 PKADIDLKGPKADI-------DLKGPKLDV---DFDVD 225
DID KGP DI D+ GP LDV D D+D
Sbjct: 349 GGLDIDAKGPDVDIKGPRVGGDISGPDLDVSGPDLDID 386
Score = 39.3 bits (90), Expect = 0.003
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1
Query: 46 DLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADIDLKGPKLDV---DF 216
D+ G D ++ +DID KGP D+D+KGPK D+ GP LDV D
Sbjct: 2 DIGGGLDVGGGLRGG-LDIDAKGP-----------DVDIKGPKVGGDISGPDLDVSGPDL 49
Query: 217 DVD 225
D+D
Sbjct: 50 DID 52
>sp||Q09666_2 [Segment 2 of 2] Neuroblast differentiation-associated protein
AHNAK (Desmoyokin)
Length = 1277
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 19/85 (22%)
Frame = +1
Query: 16 VKKPKGEIDL-DLNA-GADANLDIKK---------------PHVDIDLKGPK--GDIGLK 138
V PK ++D+ D+N G D L + K P VD+DLKGPK GD +
Sbjct: 198 VSGPKVDVDIPDVNIEGPDPKLKVPKVKMPEINIKAPKISIPDVDLDLKGPKVKGDFDVS 257
Query: 139 GPKADIDLKGPKADIDLKGPKLDVD 213
PK + LKGP ++DLKGP+LD +
Sbjct: 258 VPKVEGTLKGP--EVDLKGPRLDFE 280
Score = 48.9 bits (115), Expect = 4e-06
Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 20/90 (22%)
Frame = +1
Query: 13 KVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIG------------LKGPKA-- 150
KVK PK + G D +D+ P DID+ GPK D+ LK PK
Sbjct: 169 KVKMPKFSMPGFKGEGPD--VDVSLPKADIDVSGPKVDVDIPDVNIEGPDPKLKVPKVKM 226
Query: 151 -DIDLKGPK-----ADIDLKGPKLDVDFDV 222
+I++K PK D+DLKGPK+ DFDV
Sbjct: 227 PEINIKAPKISIPDVDLDLKGPKVKGDFDV 256
Score = 48.1 bits (113), Expect = 6e-06
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 38/104 (36%)
Frame = +1
Query: 16 VKKPKGEI-DLDLNAGAD---ANLDIKKPHVDIDLKGPKGDI------------------ 129
+K PK + D+DLN ++D+ P V+ DLKGP+ DI
Sbjct: 103 IKAPKISMPDIDLNLKGPKVKGDVDVTLPKVEGDLKGPEADIKGPKVDINTPDVDVHGPD 162
Query: 130 ----------------GLKGPKADIDLKGPKADIDLKGPKLDVD 213
G KG D+D+ PKADID+ GPK+DVD
Sbjct: 163 WHLKMPKVKMPKFSMPGFKGEGPDVDVSLPKADIDVSGPKVDVD 206
Score = 45.4 bits (106), Expect = 4e-05
Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 18/81 (22%)
Frame = +1
Query: 25 PKGEIDLDLNAGADANLDIKKPHVDI-----DLKGPKGDI-------------GLKGPKA 150
PK E DL G +A DIK P VDI D+ GP + G KG
Sbjct: 3 PKVEGDLK---GPEA--DIKGPKVDINTPDVDVHGPDWHLKMPKVKMPKFSMPGFKGEGP 57
Query: 151 DIDLKGPKADIDLKGPKLDVD 213
D+D+ PKADID+ GPK+DVD
Sbjct: 58 DVDVNLPKADIDVSGPKVDVD 78
Score = 45.4 bits (106), Expect = 4e-05
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 20/90 (22%)
Frame = +1
Query: 13 KVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIG------------LKGPK--- 147
KVK PK + G D +D+ P DID+ GPK D+ LKGPK
Sbjct: 41 KVKMPKFSMPGFKGEGPD--VDVNLPKADIDVSGPKVDVDVPDVNIEGPDAKLKGPKFKM 98
Query: 148 ADIDLKGPKA-----DIDLKGPKLDVDFDV 222
++ +K PK D++LKGPK+ D DV
Sbjct: 99 PEMSIKAPKISMPDIDLNLKGPKVKGDVDV 128
Score = 43.5 bits (101), Expect = 1e-04
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +1
Query: 7 GGKVKKPKGEIDLDLNAGADANLDIKKPHV--DIDLKGPKGDIGLKGPKADIDLKGPKAD 180
G K K P+ I + D +L++K P V D+D+ PK + LKGP+ADI KGPK D
Sbjct: 93 GPKFKMPEMSIKAPKISMPDIDLNLKGPKVKGDVDVTLPKVEGDLKGPEADI--KGPKVD 150
Query: 181 IDLKGPKLDV 210
I+ P +DV
Sbjct: 151 INT--PDVDV 158
Score = 42.7 bits (99), Expect = 3e-04
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Frame = +1
Query: 13 KVKKPKGEIDLDLNAGADANLDIKKPHV--DIDLKGPKGDIGLKGPKADIDLKGPKADID 186
KVK P+ I + D +LD+K P V D D+ PK + LKGP ++DLKGP+ D +
Sbjct: 223 KVKMPEINIKAPKISIPDVDLDLKGPKVKGDFDVSVPKVEGTLKGP--EVDLKGPRLDFE 280
Query: 187 -----LKGPKL 204
L GP L
Sbjct: 281 GPDAKLSGPSL 291
Score = 41.2 bits (95), Expect = 7e-04
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Frame = +1
Query: 10 GKVKKPK---GEIDLDLNA--GADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPK 174
G +K PK G DL L A G+ +K P I G + KGP+ +LKGP
Sbjct: 765 GDIKCPKVSVGAPDLSLEASEGSIKLPKMKLPQFGISTPGSDLHVNAKGPQVSGELKGPG 824
Query: 175 ADIDLKGPKL---DVDFDVD 225
D++LKG ++ +VDF+++
Sbjct: 825 VDVNLKGSRISAPNVDFNLE 844
Score = 40.0 bits (92), Expect = 0.002
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Frame = +1
Query: 1 SFGGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKA- 177
S GGK KK K ++ +G + KK D+++ G + D LK P D+++ GP A
Sbjct: 400 SVGGKGKKSKFKMPKIHMSGP--KIKAKKQGFDLNVPGGEIDASLKAPDVDVNIAGPDAA 457
Query: 178 -DIDLKGPKL-----------DVDFDV 222
+D+K PK DV+FD+
Sbjct: 458 LKVDVKSPKTKKTMFGKMYFPDVEFDI 484
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +1
Query: 79 IKKPHVDIDLKGPKGDIGLKGPK---ADIDLKGPKADIDLKGPKLDVDFD 219
+ P VD+ LK PK IG GPK ++DLKGPK ++ P LDV D
Sbjct: 303 VTAPDVDLHLKAPK--IGFSGPKLEGGEVDLKGPK----VEAPSLDVHMD 346
Score = 39.3 bits (90), Expect = 0.003
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 19/86 (22%)
Frame = +1
Query: 10 GKVKKPKGEIDL---DLNA-GADANL----------DIKKPHVDIDLKGPK--GDI---G 132
G +K PK + +L D+N G DA + + P V+++LKGPK GD+ G
Sbjct: 544 GDLKGPKVQANLGAPDINIEGLDAKVKTPSFGISAPQVSIPDVNVNLKGPKIKGDVPSVG 603
Query: 133 LKGPKADIDLKGPKADIDLKGPKLDV 210
L+GP D+DL+GP+A I K PK +
Sbjct: 604 LEGP--DVDLQGPEAKI--KFPKFSM 625
Score = 39.3 bits (90), Expect = 0.003
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +1
Query: 58 GADANLDIKKPHVDIDLKGPK-----GDIGLKGPKADID--------LKGPKADIDLKGP 198
G A + + P ++ DL+GP D+ LKGP D+ + GP D++LKGP
Sbjct: 637 GGGAEVHAQLPSLEGDLRGPDVKLEGPDVSLKGPGVDLPSVNLSMPKVSGPDLDLNLKGP 696
Query: 199 KLDVDFD 219
L D D
Sbjct: 697 SLKGDLD 703
Score = 38.9 bits (89), Expect = 0.004
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 19/81 (23%)
Frame = +1
Query: 16 VKKPKGEI---DLDLNAGADANLD---IKKPHVDID-LKGPKGDIGLKGPKADIDLKGPK 174
+K PK +I D+D++ G D +L +K P + KG D+ + PKADID+ GPK
Sbjct: 16 IKGPKVDINTPDVDVH-GPDWHLKMPKVKMPKFSMPGFKGEGPDVDVNLPKADIDVSGPK 74
Query: 175 ADID------------LKGPK 201
D+D LKGPK
Sbjct: 75 VDVDVPDVNIEGPDAKLKGPK 95
Score = 38.1 bits (87), Expect = 0.006
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Frame = +1
Query: 16 VKKPKGEI---DLDLNAGADANLD---IKKPHVDID-LKGPKGDIGLKGPKADIDLKGPK 174
+K PK +I D+D++ G D +L +K P + KG D+ + PKADID+ GPK
Sbjct: 144 IKGPKVDINTPDVDVH-GPDWHLKMPKVKMPKFSMPGFKGEGPDVDVSLPKADIDVSGPK 202
Query: 175 ADIDL 189
D+D+
Sbjct: 203 VDVDI 207
Score = 37.0 bits (84), Expect = 0.014
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Frame = +1
Query: 7 GGKVKKPKGEIDLDLNAGADANLDIKKPHVDID-LKGPKGDIGLKGPKADI-----DLKG 168
G KV+ P ++ +D +++I+ P V I K PK G K PKADI D+
Sbjct: 333 GPKVEAPSLDVHMD-----SPDINIEGPDVKIPKFKKPKFGFGPKSPKADIKSPSLDVTV 387
Query: 169 PKADIDLKGPKLDV 210
P+A+++L+ P++ V
Sbjct: 388 PEAELNLETPEISV 401
Score = 36.6 bits (83), Expect = 0.018
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Frame = +1
Query: 4 FGGKVKKPKGEIDLDLNAGADANLDIKKPHV---DIDLKGPK---GDIGLKGPKADIDLK 165
F + P +++ +L A D L + HV DI K PK D+ + PK + DLK
Sbjct: 489 FKAEAPLPSPKLEGELQA-PDLELSLPAIHVEGLDIKAKAPKVKMPDVDISVPKIEGDLK 547
Query: 166 GPKADIDLKGPKLDVD 213
GPK +L P ++++
Sbjct: 548 GPKVQANLGAPDINIE 563
Score = 35.8 bits (81), Expect = 0.031
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 31 GEIDLDLNAGADANLDIKKPHVDIDLKGPKGDI-GLKGPKADIDLKGPKADIDLKGPKLD 207
GE+DL +LD+ DI+++GP I K PK K PKADI K P LD
Sbjct: 327 GEVDLKGPKVEAPSLDVHMDSPDINIEGPDVKIPKFKKPKFGFGPKSPKADI--KSPSLD 384
Query: 208 V 210
V
Sbjct: 385 V 385
Score = 33.5 bits (75), Expect = 0.15
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 23/80 (28%)
Frame = +1
Query: 43 LDLNAGADA----NLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKG-------------- 168
LD+ A A ++DI P ++ DLKGPK L P DI+++G
Sbjct: 521 LDIKAKAPKVKMPDVDISVPKIEGDLKGPKVQANLGAP--DINIEGLDAKVKTPSFGISA 578
Query: 169 -----PKADIDLKGPKLDVD 213
P +++LKGPK+ D
Sbjct: 579 PQVSIPDVNVNLKGPKIKGD 598
Score = 31.6 bits (70), Expect = 0.58
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Frame = +1
Query: 7 GGKVKKPKGEIDLDLN-AGADANL--DIKKPH-------------VDIDLKGP--KGDIG 132
GG++ D+D+N AG DA L D+K P V+ D+K P K +
Sbjct: 435 GGEIDASLKAPDVDVNIAGPDAALKVDVKSPKTKKTMFGKMYFPDVEFDIKSPKFKAEAP 494
Query: 133 LKGPKADIDLKGPKADIDLKGPKLDVD 213
L PK + +L+ P D++L P + V+
Sbjct: 495 LPSPKLEGELQAP--DLELSLPAIHVE 519
Score = 30.0 bits (66), Expect = 1.7
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 7 GGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKAD-- 180
G VK P G+I +G + +K ++ G DI +KGP ++ P++D
Sbjct: 895 GVNVKLPTGQI-----SGPEIKGGLKGS--EVGFHGAAPDISVKGPA--FNMASPESDFG 945
Query: 181 IDLKGPKLDVDFDV 222
I+LKGPK+ DV
Sbjct: 946 INLKGPKIKGGADV 959
Score = 29.6 bits (65), Expect = 2.2
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +1
Query: 58 GADANLD---IKKPHVDIDLKGP--KGDIGLKGPKADIDLKGPKADIDLKG 195
G D NL I P+VD +L+GP KG +G G ++KGP L G
Sbjct: 824 GVDVNLKGSRISAPNVDFNLEGPKVKGSLGATG-----EIKGPTVGGGLPG 869
>sp||Q09666_1 [Segment 1 of 2] Neuroblast differentiation-associated protein AHNAK
(Desmoyokin)
Length = 1683
Score = 46.2 bits (108), Expect = 2e-05
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 27/94 (28%)
Frame = +1
Query: 13 KVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDI--------------------- 129
K K KG++D+ L + ++K P D+D+KGPK DI
Sbjct: 1086 KGPKLKGDVDVSL---PEVEGEMKVP--DVDIKGPKVDISAPDVDVHGPDWHLKMPKVKM 1140
Query: 130 ------GLKGPKADIDLKGPKADIDLKGPKLDVD 213
G KG ++D+K PKAD+D+ GPK+D +
Sbjct: 1141 PKFSMPGFKGEGPEVDVKLPKADVDVSGPKMDAE 1174
Score = 44.3 bits (103), Expect = 9e-05
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 35/95 (36%)
Frame = +1
Query: 34 EIDLDLNAGA-DANLDIKKPHV-------DIDLKGPKGDI-------------------- 129
++DLDL N+DI P + D+D++GPK DI
Sbjct: 824 DVDLDLKGPKMKGNVDISAPKIEGEMQVPDVDIRGPKVDIKAPDVEGQGLDWSLKIPKMK 883
Query: 130 -------GLKGPKADIDLKGPKADIDLKGPKLDVD 213
LKG ++D+ PKAD+D+ GPK+D++
Sbjct: 884 MPKFSMPSLKGEGPEVDVNLPKADVDVSGPKVDIE 918
Score = 43.9 bits (102), Expect = 1e-04
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 22/92 (23%)
Frame = +1
Query: 13 KVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPK-----GDIGLKGPKADIDLKGPK- 174
KVK PK + G +D+K P D+D+ GPK D+ ++GP D LKGPK
Sbjct: 1137 KVKMPK--FSMPGFKGEGPEVDVKLPKADVDVSGPKMDAEVPDVNIEGP--DAKLKGPKF 1192
Query: 175 ----------------ADIDLKGPKLDVDFDV 222
+ LKGPK+ D+DV
Sbjct: 1193 KMPEMSIKPQKISIPDVGLHLKGPKMKGDYDV 1224
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 20/90 (22%)
Frame = +1
Query: 13 KVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIG------------LKGPK--- 147
K+K PK + G +D+ P DID+ GPK D+ LKGPK
Sbjct: 1009 KMKMPK--FSMPGFKGEGREVDVNLPKADIDVSGPKVDVEVPDVSLEGPEGKLKGPKFKM 1066
Query: 148 ADIDLKGPK-----ADIDLKGPKLDVDFDV 222
++ K PK D++LKGPKL D DV
Sbjct: 1067 PEMHFKAPKISMPDVDLNLKGPKLKGDVDV 1096
Score = 43.1 bits (100), Expect = 2e-04
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 19/91 (20%)
Frame = +1
Query: 7 GGKVKKPKGEIDLDLNAGA------DANLDIKKPHVD-----IDLKGPKGDIGLKGPK-- 147
G +K PK + D+D++ +D+K P +D ID++GP+G LKGPK
Sbjct: 1338 GLNLKAPKLKTDVDVSLPKVEGDLKGPEIDVKAPKMDVNVGDIDIEGPEGK--LKGPKFK 1395
Query: 148 -ADIDLKGPK-----ADIDLKGPKLDVDFDV 222
++ K PK D+ LKGPK+ D DV
Sbjct: 1396 MPEMHFKAPKISMPDVDLHLKGPKVKGDMDV 1426
Score = 42.4 bits (98), Expect = 3e-04
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 21/91 (23%)
Frame = +1
Query: 13 KVKKPKGEI--------DLDLNAGADANLDIKKPHVD-----IDLKGPKGDIGLKGPK-- 147
K+K PK + + D+N + AN+DI P VD + L+GP+G LKGPK
Sbjct: 753 KIKMPKFSMPSLKGEGPEFDVNL-SKANVDISAPKVDTNAPDLSLEGPEGK--LKGPKFK 809
Query: 148 -ADIDLKGPK-----ADIDLKGPKLDVDFDV 222
++ + PK D+DLKGPK+ + D+
Sbjct: 810 MPEMHFRAPKMSLPDVDLDLKGPKMKGNVDI 840
Score = 42.4 bits (98), Expect = 3e-04
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 22/89 (24%)
Frame = +1
Query: 13 KVKKPKGEIDLDLNAGADA----NLDIKKPHVDID------------LKGPKGDI----- 129
K K KG++D+ + +++IK P +DID LK PK +
Sbjct: 958 KGPKVKGDVDVSVPKVEGEMKVPDVEIKGPKMDIDAPDVEVQGPDWHLKMPKMKMPKFSM 1017
Query: 130 -GLKGPKADIDLKGPKADIDLKGPKLDVD 213
G KG ++D+ PKADID+ GPK+DV+
Sbjct: 1018 PGFKGEGREVDVNLPKADIDVSGPKVDVE 1046
Score = 42.4 bits (98), Expect = 3e-04
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 27/96 (28%)
Frame = +1
Query: 7 GGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDI------------------- 129
G +K PK + D D+ +IK P D+D+KGPK DI
Sbjct: 1210 GLHLKGPKMKGDYDVTV-PKVEGEIKAP--DVDIKGPKVDINAPDVEVHGPDWHLKMPKV 1266
Query: 130 --------GLKGPKADIDLKGPKADIDLKGPKLDVD 213
G KG ++D+ PKAD+ + GPK+D+D
Sbjct: 1267 KMPKFSMPGFKGEGPEVDMNLPKADLGVSGPKVDID 1302
Score = 42.0 bits (97), Expect = 4e-04
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +1
Query: 10 GKVKKPKGEIDL-DLNA-GADANLDIKKPHVDIDLKGPKGDI-GLKGPKADIDLKGPKAD 180
G++K PK +ID D++ G D +L + K +K PK + G K ++D+ PKAD
Sbjct: 477 GELKGPKVDIDAPDVDVHGPDWHLKMPK------MKMPKFSVPGFKAEGPEVDVNLPKAD 530
Query: 181 IDLKGPKLDV 210
+D+ GPK+DV
Sbjct: 531 VDISGPKIDV 540
Score = 41.6 bits (96), Expect = 6e-04
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +1
Query: 10 GKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADIDL 189
GK+K PK ++ ++N A I P VD+ +KGPK K + D+ PK + DL
Sbjct: 680 GKLKGPKFKMP-EMNIKAPK---ISMPDVDLHMKGPK-------VKGEYDMTVPKLEGDL 728
Query: 190 KGPKLDV 210
KGPK+DV
Sbjct: 729 KGPKVDV 735
Score = 41.6 bits (96), Expect = 6e-04
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 20/90 (22%)
Frame = +1
Query: 13 KVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIG------------LKGPK--- 147
K+K PK + G +D+ P D+D+ GPK DI LKGPK
Sbjct: 881 KMKMPK--FSMPSLKGEGPEVDVNLPKADVDVSGPKVDIEAPDVSLEGPEGKLKGPKFKM 938
Query: 148 ADIDLKGPK-----ADIDLKGPKLDVDFDV 222
++ K PK D+ LKGPK+ D DV
Sbjct: 939 PEMHFKTPKISMPDVDLHLKGPKVKGDVDV 968
Score = 40.0 bits (92), Expect = 0.002
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 13/85 (15%)
Frame = +1
Query: 7 GGKVKKPKGEIDLDLNAGADANLDIKKPHV-----DIDLKGPKGDIGLKGPK---ADIDL 162
G K + P E+D++L A++DI P V D++++GP+G LKGPK ++++
Sbjct: 642 GFKAEGP--EVDVNL---PKADVDISGPKVGVEVPDVNIEGPEGK--LKGPKFKMPEMNI 694
Query: 163 KGPK-----ADIDLKGPKLDVDFDV 222
K PK D+ +KGPK+ ++D+
Sbjct: 695 KAPKISMPDVDLHMKGPKVKGEYDM 719
Score = 40.0 bits (92), Expect = 0.002
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Frame = +1
Query: 7 GGKVKKPKGEIDLDLNAGADANLDIKKPHVD-----IDLKGPKGDI-GLKGPKADIDLKG 168
G K + P E+D++L A++D+ P VD +D++GP+G + G K +++K
Sbjct: 1477 GFKAEGP--EVDVNLRK---ADIDVSGPSVDTDAPDLDIEGPEGKLKGSKFKMPKLNIKA 1531
Query: 169 PKA-----DIDLKGPKLDVDFD 219
PK D++LKGPKL + D
Sbjct: 1532 PKVSMPDVDLNLKGPKLKGEID 1553
Score = 39.7 bits (91), Expect = 0.002
Identities = 37/107 (34%), Positives = 48/107 (44%), Gaps = 41/107 (38%)
Frame = +1
Query: 13 KVKKPK----------GEIDLDLNAGADANLDIKKPHVDID------------LKGPK-- 120
KVK PK E+D++L A+L + P VDID LKGPK
Sbjct: 1265 KVKMPKFSMPGFKGEGPEVDMNL---PKADLGVSGPKVDIDVPDVNLEAPEGKLKGPKFK 1321
Query: 121 -------------GDIGL--KGPK--ADIDLKGPKADIDLKGPKLDV 210
D+GL K PK D+D+ PK + DLKGP++DV
Sbjct: 1322 MPSMNIQTHKISMPDVGLNLKAPKLKTDVDVSLPKVEGDLKGPEIDV 1368
Score = 39.3 bits (90), Expect = 0.003
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 7 GGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADID 186
GGK+K P D+ L + I P VD+ +KG K K + D+ PK + +
Sbjct: 430 GGKLKGP----DVKLPDMSVKTPKISMPDVDLHVKGTK-------VKGEYDVTVPKLEGE 478
Query: 187 LKGPKLDVDF-DVD 225
LKGPK+D+D DVD
Sbjct: 479 LKGPKVDIDAPDVD 492
Score = 38.9 bits (89), Expect = 0.004
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 20/90 (22%)
Frame = +1
Query: 13 KVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIG------------LKGPK--- 147
K+K PK + G + +D+ P D+D+ GPK D+ LKGPK
Sbjct: 504 KMKMPKFSVPGFKAEGPE--VDVNLPKADVDISGPKIDVTAPDVSIEEPEGKLKGPKFKM 561
Query: 148 ADIDLKGPK-----ADIDLKGPKLDVDFDV 222
++++K PK D+ LKGP + ++DV
Sbjct: 562 PEMNIKVPKISMPDVDLHLKGPNVKGEYDV 591
Score = 38.9 bits (89), Expect = 0.004
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 39/103 (37%)
Frame = +1
Query: 34 EIDLDLNAGADANLDIKKPHVDID-----LKGPKG------------------------D 126
E+D++L A++D+ P VD++ L+GP+G D
Sbjct: 1026 EVDVNL---PKADIDVSGPKVDVEVPDVSLEGPEGKLKGPKFKMPEMHFKAPKISMPDVD 1082
Query: 127 IGLKGP--KADIDLKGPKA-------DIDLKGPKLDVDF-DVD 225
+ LKGP K D+D+ P+ D+D+KGPK+D+ DVD
Sbjct: 1083 LNLKGPKLKGDVDVSLPEVEGEMKVPDVDIKGPKVDISAPDVD 1125
Score = 38.9 bits (89), Expect = 0.004
Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 53/124 (42%)
Frame = +1
Query: 10 GKVKKPKGEID---LDLNA------GADANLDIKK---------------PHVDIDLKGP 117
G++K P +I +D+NA G D +L + K P VD++L P
Sbjct: 1231 GEIKAPDVDIKGPKVDINAPDVEVHGPDWHLKMPKVKMPKFSMPGFKGEGPEVDMNL--P 1288
Query: 118 KGDIGLKGPKADID------------LKGPK-----------------ADIDLKGPKLDV 210
K D+G+ GPK DID LKGPK ++LK PKL
Sbjct: 1289 KADLGVSGPKVDIDVPDVNLEAPEGKLKGPKFKMPSMNIQTHKISMPDVGLNLKAPKLKT 1348
Query: 211 DFDV 222
D DV
Sbjct: 1349 DVDV 1352
Score = 38.5 bits (88), Expect = 0.005
Identities = 28/68 (41%), Positives = 37/68 (54%)
Frame = +1
Query: 7 GGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADID 186
G K K PK LN A + P VD++LKGPK LKG +ID P+ + D
Sbjct: 1519 GSKFKMPK------LNIKAPK---VSMPDVDLNLKGPK----LKG---EIDASVPELEGD 1562
Query: 187 LKGPKLDV 210
L+GP++DV
Sbjct: 1563 LRGPQVDV 1570
Score = 37.4 bits (85), Expect = 0.011
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 26/92 (28%)
Frame = +1
Query: 16 VKKPKGEIDLDLNAGADA------NLDIKKPHVDID------------LKGPKGDI---- 129
+K PK + D+D++ ++DIK P VDID LK PK +
Sbjct: 1415 LKGPKVKGDMDVSVPKVEGEMKVPDVDIKGPKVDIDAPDVEVHDPDWHLKMPKMKMPKFS 1474
Query: 130 --GLK--GPKADIDLKGPKADIDLKGPKLDVD 213
G K GP+ D++L+ KADID+ GP +D D
Sbjct: 1475 MPGFKAEGPEVDVNLR--KADIDVSGPSVDTD 1504
Score = 37.0 bits (84), Expect = 0.014
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 17/87 (19%)
Frame = +1
Query: 13 KVKKPKGEIDLDL----NAGADANLDIKKPHV-----DIDLKGPKGDIGLKGPK---ADI 156
K K KGEID + +D+K P V D+DL+ P D LKGPK ++
Sbjct: 1544 KGPKLKGEIDASVPELEGDLRGPQVDVKGPLVEAEVPDVDLECP--DAKLKGPKFKMPEM 1601
Query: 157 DLKGPK-----ADIDLKGPKLDVDFDV 222
K PK D+ LKGPK+ D DV
Sbjct: 1602 HFKAPKISMPDVDLHLKGPKVKGDADV 1628
Score = 36.2 bits (82), Expect = 0.024
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 11/60 (18%)
Frame = +1
Query: 67 ANLDIKKPHVDID-----LKGPKGDI------GLKGPKADIDLKGPKADIDLKGPKLDVD 213
A +DI P V++ LK PK + G K ++D+ PKAD+D+ GPK+ V+
Sbjct: 610 AKMDIDVPDVEVQGPDWHLKMPKMKMPKFSMPGFKAEGPEVDVNLPKADVDISGPKVGVE 669
Score = 35.8 bits (81), Expect = 0.031
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 14/55 (25%)
Frame = +1
Query: 79 IKKPHVDIDLKGPK--GDIGLKGPKADIDLKGPKA------------DIDLKGPK 201
I P VD+ LKGPK GD + PK + DL GP D LKGPK
Sbjct: 1608 ISMPDVDLHLKGPKVKGDADVSVPKLEGDLTGPSVGVEVPDVELECPDAKLKGPK 1662
Score = 35.4 bits (80), Expect = 0.040
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 19/81 (23%)
Frame = +1
Query: 16 VKKPKGEI---DLDLNAGADANLD---IKKPHVDID-LKGPKGDIGLKGPKADIDLKGPK 174
+K PK +I D+D++ G D +L +K P + KG ++ +K PKAD+D+ GPK
Sbjct: 1112 IKGPKVDISAPDVDVH-GPDWHLKMPKVKMPKFSMPGFKGEGPEVDVKLPKADVDVSGPK 1170
Query: 175 ADID------------LKGPK 201
D + LKGPK
Sbjct: 1171 MDAEVPDVNIEGPDAKLKGPK 1191
Score = 35.0 bits (79), Expect = 0.053
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 18/81 (22%)
Frame = +1
Query: 13 KVKKPKGEIDL-DLNA-GADANLDIKKPHVD-IDLKGPKGD---IGLKGPKADIDLKGPK 174
++K PK +ID D+ G D +L + K + + G KG+ + + PKADID+ GPK
Sbjct: 983 EIKGPKMDIDAPDVEVQGPDWHLKMPKMKMPKFSMPGFKGEGREVDVNLPKADIDVSGPK 1042
Query: 175 ADID------------LKGPK 201
D++ LKGPK
Sbjct: 1043 VDVEVPDVSLEGPEGKLKGPK 1063
Score = 34.7 bits (78), Expect = 0.069
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Frame = +1
Query: 10 GKVKKPKGEIDLDLNAGADANLDIKKPHVDI-----DLKGPKGDI------GLKGPKADI 156
GKVK P E+D+ +D+ P V+ +LK PK + G KG D+
Sbjct: 349 GKVKVP--EVDV-----RGPKVDVSAPDVEAHGPEWNLKMPKMKMPTFSTPGAKGEGPDV 401
Query: 157 DLKGPKADIDLKGPKLDVD 213
+ PK DI + GPK++V+
Sbjct: 402 HMTLPKGDISISGPKVNVE 420
Score = 33.5 bits (75), Expect = 0.15
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +1
Query: 7 GGKVKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADID 186
G KVK P+ I + D +L + P + KGDI + P D+KGP+ +
Sbjct: 238 GTKVKTPEMIIQKPKISMQDVDLSLGSPKL-------KGDIKVSAPGVQGDVKGPQ--VA 288
Query: 187 LKGPKLDVD 213
LKG ++D++
Sbjct: 289 LKGSRVDIE 297
Score = 32.0 bits (71), Expect = 0.45
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +1
Query: 10 GKVKKPKGEI---DLDLNAGADANLDIKKPHVDIDLKGPKGDI-GLKGPKADIDLKGPKA 177
G +K PK ++ D+++ G D NL + K +K PK + LKG + D+ KA
Sbjct: 726 GDLKGPKVDVSAPDVEMQ-GPDWNLKMPK------IKMPKFSMPSLKGEGPEFDVNLSKA 778
Query: 178 DIDLKGPKLDVD 213
++D+ PK+D +
Sbjct: 779 NVDISAPKVDTN 790
Score = 29.6 bits (65), Expect = 2.2
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 55 AGADANLDIKKPHVDIDLKGPK--GDIGLKGPKADIDLKGPKADIDLKGPKLDV 210
+G I VD+++ PK G + + P+ + +K P ++D++GPK+DV
Sbjct: 314 SGKTGTCRISMSEVDLNVAAPKVKGGVDVTLPRVEGKVKVP--EVDVRGPKVDV 365
>sp|Q60754|MTCO_MOUSE Macrophage receptor MARCO (Macrophage receptor with collagenous
structure)
Length = 518
Score = 40.4 bits (93), Expect = 0.001
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +1
Query: 109 KGPKGDIGLKGPKADIDLKGPKADIDLKGPKLDVDFDVD 225
KG KGDIGL GPK + KG K D+ L G K D+ D
Sbjct: 227 KGSKGDIGLTGPKGEHGTKGDKGDLGLPGNKGDMGMKGD 265
Score = 40.4 bits (93), Expect = 0.001
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 97 DIDLKGPKGDIGLKGPKADIDLKGPKADIDLKG 195
DI L GPKG+ G KG K D+ L G K D+ +KG
Sbjct: 232 DIGLTGPKGEHGTKGDKGDLGLPGNKGDMGMKG 264
Score = 33.5 bits (75), Expect = 0.15
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 25 PKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKG 168
P+GE G+ ++ + P + KG KGD+GL G K D+ +KG
Sbjct: 223 PRGE------KGSKGDIGLTGPKGEHGTKGDKGDLGLPGNKGDMGMKG 264
Score = 28.1 bits (61), Expect = 6.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 106 LKGPKGDIGLKGPKADIDLKGPKADIDLKGPK 201
L GPKG+ G G K D +KG KG K
Sbjct: 382 LAGPKGEPGRVGQKGDPGMKGSSGQQGQKGEK 413
>sp|Q9WUB9|MARCO_MESAU Macrophage receptor MARCO (Macrophage receptor with collagenous
structure)
Length = 483
Score = 37.4 bits (85), Expect = 0.011
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 97 DIDLKGPKGDIGLKGPKADIDLKGPKADIDLKG 195
D L GPKG+ G KG K D+ L G K D+ +KG
Sbjct: 198 DKGLIGPKGEHGTKGDKGDLGLPGSKGDMGMKG 230
Score = 37.0 bits (84), Expect = 0.014
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1
Query: 109 KGPKGDIGLKGPKADIDLKGPKADIDLKGPKLDV 210
KG KGD GL GPK + KG K D+ L G K D+
Sbjct: 193 KGSKGDKGLIGPKGEHGTKGDKGDLGLPGSKGDM 226
Score = 31.2 bits (69), Expect = 0.76
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 25 PKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKG 168
P+GE G+ + + P + KG KGD+GL G K D+ +KG
Sbjct: 189 PQGE------KGSKGDKGLIGPKGEHGTKGDKGDLGLPGSKGDMGMKG 230
Score = 27.7 bits (60), Expect = 8.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 106 LKGPKGDIGLKGPKADIDLKGPKADIDLKGPK 201
L GPKG+ G G K D +KG KG K
Sbjct: 348 LAGPKGEPGRPGLKGDPGMKGSSGQQGQKGEK 379
>sp|Q9UEW3|MRCO_HUMAN Macrophage receptor MARCO (Macrophage receptor with collagenous
structure)
Length = 520
Score = 37.0 bits (84), Expect = 0.014
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = +1
Query: 109 KGPKGDIGLKGPKADIDLKGPKADIDLKGPKLD 207
KG KGD GL GPK + KG K D+ L G K D
Sbjct: 228 KGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGD 260
Score = 36.2 bits (82), Expect = 0.024
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1
Query: 97 DIDLKGPKGDIGLKGPKADIDLKGPKADIDLKG 195
D L GPKG+ G KG K D+ L G K D +KG
Sbjct: 233 DGGLIGPKGETGTKGEKGDLGLPGSKGDRGMKG 265
Score = 31.6 bits (70), Expect = 0.58
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 88 PHVDIDLKGPKGDIGLKGPKADIDLKGPKADIDLKGP 198
P + KG KGD+GL G K D +G K D + GP
Sbjct: 239 PKGETGTKGEKGDLGLPGSKGD---RGMKGDAGVMGP 272
Score = 28.5 bits (62), Expect = 4.9
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +1
Query: 16 VKKPKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADIDLKG 195
+K KG+ L G + P +KG +G GL GPK G K D +KG
Sbjct: 347 LKGSKGDTGLQGQQGRKGESGVPGP---AGVKGEQGSPGLAGPKGAPGQAGQKGDQGVKG 403
Score = 28.5 bits (62), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 106 LKGPKGDIGLKGPKADIDLKGPKADIDLKGPK 201
L GPKG G G K D +KG + +KG K
Sbjct: 383 LAGPKGAPGQAGQKGDQGVKGSSGEQGVKGEK 414
>sp|Q99PG2|OGFR_MOUSE Opioid growth factor receptor (OGFr) (Zeta-type opioid receptor)
Length = 633
Score = 33.5 bits (75), Expect = 0.15
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +1
Query: 25 PKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADIDLKGPKL 204
PKG+++ + G D P + + PKG +G + PK+ + + PK+ ++ + PK
Sbjct: 507 PKGQVEPEDPKGQVGPED---PKGQVGPEDPKGQVGPEDPKSQVGPEDPKSQVEPEDPKS 563
Query: 205 DVD 213
V+
Sbjct: 564 QVE 566
Score = 27.7 bits (60), Expect = 8.4
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 25 PKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADIDLKGPKL 204
PKG++ + G D P + + PK + + PK+ ++ + PK+ ++ + PK
Sbjct: 525 PKGQVGPEDPKGQVGPED---PKSQVGPEDPKSQVEPEDPKSQVEPEDPKSQVEPEDPKS 581
Query: 205 DV 210
V
Sbjct: 582 QV 583
>sp|Q05722|CA19_MOUSE Collagen alpha 1(IX) chain precursor
Length = 921
Score = 33.1 bits (74), Expect = 0.20
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 106 LKGPKGDIGLKGPKADIDLKGPKADIDLKGPK 201
+KGP G +GL+GPK D+ KG + +GPK
Sbjct: 821 IKGPPGALGLRGPKGDLGEKGERGPPG-RGPK 851
Score = 30.8 bits (68), Expect = 0.99
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 GPKGDIGLKGPKADIDLKGPKADIDLKGPK 201
G +G G+KGP + L+GPK D+ KG +
Sbjct: 814 GIRGLPGIKGPPGALGLRGPKGDLGEKGER 843
Score = 30.4 bits (67), Expect = 1.3
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 25 PKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPK 174
P GE G IK P + L+GPKGD+G KG + +GPK
Sbjct: 803 PPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPG-RGPK 851
Score = 29.3 bits (64), Expect = 2.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 112 GPKGDIGLKGPKADIDLKGPKADIDLKG 195
GPKGD G++G + GPK D L G
Sbjct: 514 GPKGDRGIQGSRGIPGSPGPKGDTGLPG 541
>sp|P83371|OTO1_ONCKE Otolin-1 precursor
Length = 508
Score = 33.1 bits (74), Expect = 0.20
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 109 KGPKGDIGLKGPKADIDLKGPKADIDLKG 195
+GPKGD+G KG K + L G K D+ +G
Sbjct: 212 EGPKGDLGPKGEKGETGLPGLKGDLGERG 240
Score = 31.2 bits (69), Expect = 0.76
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 28 KGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPKADIDLKGPK 201
KG++ L G D D KG +GD G+ G + +GPK D+ KG K
Sbjct: 167 KGDVGLMGPPGLDGMPGATGLEGDKGDKGDQGDTGMPGAPGILGKEGPKGDLGPKGEK 224
Score = 29.6 bits (65), Expect = 2.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 109 KGPKGDIGLKGPKADIDLKGPKADIDLKGPK 201
+GP G G+ GPK + KGPK ++GPK
Sbjct: 337 RGPPGLRGMPGPKGE---KGPKGPRGVRGPK 364
>sp|P20850|CA19_RAT Collagen alpha 1(IX) chain
Length = 325
Score = 33.1 bits (74), Expect = 0.20
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 106 LKGPKGDIGLKGPKADIDLKGPKADIDLKGPK 201
+KGP G +GL+GPK D+ KG + +GPK
Sbjct: 225 IKGPPGALGLRGPKGDLGEKGERGPPG-RGPK 255
Score = 30.8 bits (68), Expect = 0.99
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 112 GPKGDIGLKGPKADIDLKGPKADIDLKGPK 201
G +G G+KGP + L+GPK D+ KG +
Sbjct: 218 GIRGLPGIKGPPGALGLRGPKGDLGEKGER 247
Score = 30.4 bits (67), Expect = 1.3
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 25 PKGEIDLDLNAGADANLDIKKPHVDIDLKGPKGDIGLKGPKADIDLKGPK 174
P GE G IK P + L+GPKGD+G KG + +GPK
Sbjct: 207 PPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPG-RGPK 255
Score = 28.1 bits (61), Expect = 6.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 112 GPKGDIGLKGPKADIDLKGPKADIDLKGPK 201
GPKG+ G G + + ++G D+ GPK
Sbjct: 77 GPKGEQGASGEEGEAGVRGDLGDMGQPGPK 106
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.312 0.145 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,201,722
Number of Sequences: 369166
Number of extensions: 490962
Number of successful extensions: 3856
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3410
length of database: 68,354,980
effective HSP length: 47
effective length of database: 59,672,435
effective search space used: 1670828180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)