Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_B03
(687 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 252 7e-67
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 252 7e-67
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 252 7e-67
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 248 8e-66
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 246 5e-65
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 246 5e-65
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 244 1e-64
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 244 2e-64
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 243 3e-64
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (He... 242 6e-64
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 252 bits (643), Expect = 7e-67
Identities = 127/200 (63%), Positives = 146/200 (73%)
Frame = +3
Query: 9 RAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITND 188
RAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITND
Sbjct: 447 RAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITND 506
Query: 189 KGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESD 368
KGRLSK+DIERMV ++++KNSLESYA+ MKATVEDEKL+ KI++ D
Sbjct: 507 KGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDED 566
Query: 369 RKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXX 548
++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 567 KQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFP 626
Query: 549 XXXXXXXXXXKQGPTVEEVD 608
GPT+EEVD
Sbjct: 627 GGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 252 bits (643), Expect = 7e-67
Identities = 127/200 (63%), Positives = 146/200 (73%)
Frame = +3
Query: 9 RAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITND 188
RAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITND
Sbjct: 447 RAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITND 506
Query: 189 KGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESD 368
KGRLSK+DIERMV ++++KNSLESYA+ MKATVEDEKL+ KI++ D
Sbjct: 507 KGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDED 566
Query: 369 RKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXX 548
++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 567 KQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFP 626
Query: 549 XXXXXXXXXXKQGPTVEEVD 608
GPT+EEVD
Sbjct: 627 GGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 252 bits (643), Expect = 7e-67
Identities = 127/200 (63%), Positives = 146/200 (73%)
Frame = +3
Query: 9 RAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITND 188
RAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITND
Sbjct: 447 RAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITND 506
Query: 189 KGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESD 368
KGRLSK+DIERMV ++++KNSLESYA+ MKATVEDEKL+ KI++ D
Sbjct: 507 KGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDED 566
Query: 369 RKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXX 548
++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 567 KQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFP 626
Query: 549 XXXXXXXXXXKQGPTVEEVD 608
GPT+EEVD
Sbjct: 627 GGGAPPSGGASSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 248 bits (634), Expect = 8e-66
Identities = 127/203 (62%), Positives = 146/203 (71%), Gaps = 3/203 (1%)
Frame = +3
Query: 9 RAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITND 188
RAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSAV+K TGKENKITITND
Sbjct: 447 RAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITND 506
Query: 189 KGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESD 368
KGRLSK+DIERMV +++AKN LESYA+ MK+TVEDEKLK KIS+ D
Sbjct: 507 KGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDED 566
Query: 369 RKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXXX 539
++ I+DKC E IGWLDKNQ A ++EF++ KELEKVCNPI+TK+YQ
Sbjct: 567 KQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPEGMP 626
Query: 540 XXXXXXXXXXXXXKQGPTVEEVD 608
GPT+EEVD
Sbjct: 627 GGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 246 bits (627), Expect = 5e-65
Identities = 125/205 (60%), Positives = 146/205 (71%), Gaps = 5/205 (2%)
Frame = +3
Query: 9 RAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITND 188
RAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSA +K TGKENKITITND
Sbjct: 447 RAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITND 506
Query: 189 KGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESD 368
KGRLSK+DIERMV ++++KNSLESYA+ MK+TVEDEKL+ KIS+ D
Sbjct: 507 KGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDED 566
Query: 369 RKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ-----XXXXXXXXX 533
+ I++KC E IGWLDKNQ A K+E+++H KELEKVCNPI+TK+YQ
Sbjct: 567 KTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPGGMPEGMA 626
Query: 534 XXXXXXXXXXXXXXXKQGPTVEEVD 608
GPT+EEVD
Sbjct: 627 GGFPGAGGAAPGGGGSSGPTIEEVD 651
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 246 bits (627), Expect = 5e-65
Identities = 126/203 (62%), Positives = 144/203 (70%), Gaps = 3/203 (1%)
Frame = +3
Query: 9 RAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITND 188
RAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSAV+K TGKENKITITND
Sbjct: 447 RAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITND 506
Query: 189 KGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESD 368
KGRLSK+DIERMV +++AKN LESYA+ MK+TVEDEKLK KIS+ D
Sbjct: 507 KGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDED 566
Query: 369 RKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXXX 539
+ I+DKC E I WLDKNQ A KDE+++ K+LEKVCNPI+TK+YQ
Sbjct: 567 KHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQSDGGMPGGMPDGMP 626
Query: 540 XXXXXXXXXXXXXKQGPTVEEVD 608
GPT+EEVD
Sbjct: 627 GGFQELGAAPGGGSSGPTIEEVD 649
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 244 bits (624), Expect = 1e-64
Identities = 126/204 (61%), Positives = 146/204 (71%), Gaps = 4/204 (1%)
Frame = +3
Query: 9 RAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITND 188
RAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITND
Sbjct: 447 RAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITND 506
Query: 189 KGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESD 368
KGRLSK+DIERMV ++++KNSL+SYA+ MKATVEDEKL+ KI++ D
Sbjct: 507 KGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLKSYAFNMKATVEDEKLQGKINDED 566
Query: 369 RKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ----XXXXXXXXXX 536
++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 567 KQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGMP 626
Query: 537 XXXXXXXXXXXXXXKQGPTVEEVD 608
GPT+EEVD
Sbjct: 627 GGFPGGGAPPSGGASSGPTIEEVD 650
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 244 bits (623), Expect = 2e-64
Identities = 127/200 (63%), Positives = 143/200 (71%)
Frame = +3
Query: 9 RAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITND 188
RA+TKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITND
Sbjct: 446 RALTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITND 505
Query: 189 KGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESD 368
KGRLSKD+IERMV RIAAKN+LESYA+ MK T+EDEKLKDKISE D
Sbjct: 506 KGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKISEED 565
Query: 369 RKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXX 548
+K I +KC E + WLD NQ A KDEF++ KELE VCNPI+TK+YQ
Sbjct: 566 KKKIQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCNPIITKLYQSAGGMPGGMPGGMP 625
Query: 549 XXXXXXXXXXKQGPTVEEVD 608
GPT+EEVD
Sbjct: 626 GGAPGAGSTG-GGPTIEEVD 644
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 243 bits (621), Expect = 3e-64
Identities = 124/200 (62%), Positives = 143/200 (71%)
Frame = +3
Query: 9 RAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITND 188
RAMTKDNNLLGKF+L GIPPAPRGVPQIEVTFDIDANGILNV+A +K TGKENKITITND
Sbjct: 450 RAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITND 509
Query: 189 KGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESD 368
KGRLSKDDI+RMV R+AAKN+LESY Y +K TVEDEKL+ KISE D
Sbjct: 510 KGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEKLRGKISEQD 569
Query: 369 RKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXX 548
+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 570 KNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ----------GGPG 619
Query: 549 XXXXXXXXXXKQGPTVEEVD 608
GPT+EEVD
Sbjct: 620 GGSGGGGSGASGGPTIEEVD 639
>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
(Testis-specific heat shock protein-related) (HST)
Length = 633
Score = 242 bits (618), Expect = 6e-64
Identities = 123/200 (61%), Positives = 143/200 (71%)
Frame = +3
Query: 9 RAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITND 188
RAMTKDNNLLGKF+L GIPPAPRGVPQIEVTFDIDANGILNV+A +K TGKENKITITND
Sbjct: 450 RAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITND 509
Query: 189 KGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESD 368
KGRLSKDDI+RMV R+AAKN++ESY Y +K TVEDEKL+ KISE D
Sbjct: 510 KGRLSKDDIDRMVQEADGYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQD 569
Query: 369 RKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXX 548
+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 570 KNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ-------------- 615
Query: 549 XXXXXXXXXXKQGPTVEEVD 608
GPT+EEVD
Sbjct: 616 --GGPGGGGSSGGPTIEEVD 633
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,844,097
Number of Sequences: 369166
Number of extensions: 740307
Number of successful extensions: 3208
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3017
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5879188535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)