Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_O21
(781 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 498 e-141
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 498 e-141
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 497 e-140
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 497 e-140
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 497 e-140
sp|P92176|ACT2_LUMTE Actin-2 497 e-140
sp|P12716|ACTC_PISOC Actin, cytoplasmic 496 e-140
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 496 e-140
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 496 e-140
sp|P30163|ACT2_ONCVO Actin-2 496 e-140
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 498 bits (1282), Expect = e-141
Identities = 245/260 (94%), Positives = 255/260 (98%)
Frame = +1
Query: 1 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 180
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
Query: 181 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 360
EGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 361 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 540
M+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCD
Sbjct: 228 MQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCD 287
Query: 541 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 720
VDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 721 ASLSTFQQMWISKQEYDESG 780
ASLSTFQQMWISKQEYDESG
Sbjct: 348 ASLSTFQQMWISKQEYDESG 367
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 498 bits (1282), Expect = e-141
Identities = 245/260 (94%), Positives = 256/260 (98%)
Frame = +1
Query: 1 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 180
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
Query: 181 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 360
EGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 361 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 540
M+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCD
Sbjct: 228 MQTATSSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCD 287
Query: 541 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 720
VDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 721 ASLSTFQQMWISKQEYDESG 780
ASLSTFQQMWISKQEYDESG
Sbjct: 348 ASLSTFQQMWISKQEYDESG 367
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 497 bits (1280), Expect = e-140
Identities = 244/260 (93%), Positives = 255/260 (98%)
Frame = +1
Query: 1 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 180
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIY 167
Query: 181 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 360
EGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 361 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 540
M+TAS SSSLEKSYELPDGQVITIGNERFRCPEA++QPSFLG+ES GIHETTYNSIMKCD
Sbjct: 228 MQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCD 287
Query: 541 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 720
VDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 721 ASLSTFQQMWISKQEYDESG 780
ASLSTFQQMWISKQEYDESG
Sbjct: 348 ASLSTFQQMWISKQEYDESG 367
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 497 bits (1280), Expect = e-140
Identities = 245/260 (94%), Positives = 254/260 (97%)
Frame = +1
Query: 1 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 180
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
Query: 181 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 360
EGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 361 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 540
M TA+ SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTYNSIMKCD
Sbjct: 228 MHTAATSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCD 287
Query: 541 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 720
VDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 721 ASLSTFQQMWISKQEYDESG 780
ASLSTFQQMWISKQEYDESG
Sbjct: 348 ASLSTFQQMWISKQEYDESG 367
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 497 bits (1280), Expect = e-140
Identities = 244/260 (93%), Positives = 255/260 (98%)
Frame = +1
Query: 1 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 180
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 167
Query: 181 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 360
EGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 361 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 540
M+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCD
Sbjct: 228 MQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCD 287
Query: 541 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 720
VDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 721 ASLSTFQQMWISKQEYDESG 780
ASLSTFQQMWISKQEYDESG
Sbjct: 348 ASLSTFQQMWISKQEYDESG 367
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 497 bits (1279), Expect = e-140
Identities = 246/260 (94%), Positives = 255/260 (98%)
Frame = +1
Query: 1 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 180
EAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
Query: 181 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 360
EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 361 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 540
M TASASSSLEKSYELPDGQVITIGNERFRCPEA+F SFLG+ESVGIHETTYNSIMKCD
Sbjct: 228 MNTASASSSLEKSYELPDGQVITIGNERFRCPEAMFHASFLGMESVGIHETTYNSIMKCD 287
Query: 541 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 720
VDIRKDLYAN VLSGG+TM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 721 ASLSTFQQMWISKQEYDESG 780
ASLSTFQQMWISKQEYDESG
Sbjct: 348 ASLSTFQQMWISKQEYDESG 367
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 496 bits (1278), Expect = e-140
Identities = 244/260 (93%), Positives = 255/260 (98%)
Frame = +1
Query: 1 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 180
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV DSGDGV+HTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIY 167
Query: 181 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 360
EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 361 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 540
M+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCD
Sbjct: 228 MQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCD 287
Query: 541 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 720
VDIRKDLYAN VLSGGSTM+PGIADRMQKE++ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEVTALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 721 ASLSTFQQMWISKQEYDESG 780
ASLSTFQQMWISKQEYDESG
Sbjct: 348 ASLSTFQQMWISKQEYDESG 367
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 496 bits (1277), Expect = e-140
Identities = 244/260 (93%), Positives = 254/260 (97%)
Frame = +1
Query: 1 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 180
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 167
Query: 181 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 360
EGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 361 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 540
M+TAS SSSLEKSYELPDGQVITIGNERFRCPEA FQPSFLG+E+ GIHETTYNSIMKCD
Sbjct: 228 MQTASTSSSLEKSYELPDGQVITIGNERFRCPEATFQPSFLGMEAAGIHETTYNSIMKCD 287
Query: 541 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 720
VDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 VDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSIL 347
Query: 721 ASLSTFQQMWISKQEYDESG 780
ASLSTFQQMWISKQEYDESG
Sbjct: 348 ASLSTFQQMWISKQEYDESG 367
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 496 bits (1277), Expect = e-140
Identities = 246/260 (94%), Positives = 254/260 (97%)
Frame = +1
Query: 1 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 180
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIY
Sbjct: 107 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 166
Query: 181 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 360
EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 167 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 226
Query: 361 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 540
M TAS+SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCD
Sbjct: 227 MATASSSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESSGIHETTYNSIMKCD 286
Query: 541 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 720
VDIRKDLYAN VLSGG+TMYPGIADRMQKEI+ALAP TMKIKI+APPERKYSVWIGGSIL
Sbjct: 287 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 346
Query: 721 ASLSTFQQMWISKQEYDESG 780
ASLSTFQQMWISKQEYDESG
Sbjct: 347 ASLSTFQQMWISKQEYDESG 366
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 496 bits (1277), Expect = e-140
Identities = 245/260 (94%), Positives = 254/260 (97%)
Frame = +1
Query: 1 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 180
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY
Sbjct: 108 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
Query: 181 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAE 360
EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ E
Sbjct: 168 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 227
Query: 361 MRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCD 540
M TA++SSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCD
Sbjct: 228 MATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCD 287
Query: 541 VDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSIL 720
+DIRKDLYAN VLSGGSTMYPGIADRMQKEI+ALAP TMKIKI+APPERKYSVWIGGSIL
Sbjct: 288 IDIRKDLYANNVLSGGSTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 347
Query: 721 ASLSTFQQMWISKQEYDESG 780
ASLSTFQQMWISKQEYDESG
Sbjct: 348 ASLSTFQQMWISKQEYDESG 367
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,245,220
Number of Sequences: 369166
Number of extensions: 1865415
Number of successful extensions: 5688
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5525
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7308943600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)