Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_O13
(326 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P50502|F10A1_HUMAN Hsc70-interacting protein (Hip) (Puta... 67 1e-11
sp|Q5RF31|F10A1_PONPY Hsc70-interacting protein (Hip) (Prot... 67 1e-11
sp|P50503|F10A1_RAT Hsc70-interacting protein (Hip) (Protei... 67 1e-11
sp|Q8NFI4|F10A5_HUMAN Protein FAM10A5 67 2e-11
sp|Q5ZLF0|F10A1_CHICK Hsc70-interacting protein (Hip) (Prot... 66 3e-11
sp|Q99L47|F10A1_MOUSE Hsc70-interacting protein (Hip) (Prot... 65 5e-11
sp|Q08168|HRP_PLABE 58 kDa phosphoprotein (Heat shock-relat... 42 4e-04
sp|Q9USI5|STI1_SCHPO Heat shock protein sti1 homolog 37 0.011
sp|P15705|STI1_YEAST Heat shock protein STI1 35 0.040
sp|Q60864|STIP1_MOUSE Stress-induced-phosphoprotein 1 (STI1... 32 0.45
>sp|P50502|F10A1_HUMAN Hsc70-interacting protein (Hip) (Putative tumor suppressor ST13)
(Protein FAM10A1) (Progesterone receptor-associated p48
protein)
Length = 369
Score = 67.4 bits (163), Expect = 1e-11
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = +3
Query: 3 GIPSGLGDLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQSKFGG 182
G+P GL ++ +DPE++ ++DPEVM A +V NPA + KYQ+NPKV +I K+ +KFGG
Sbjct: 309 GMP-GLNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
Query: 183 AA 188
A
Sbjct: 368 QA 369
>sp|Q5RF31|F10A1_PONPY Hsc70-interacting protein (Hip) (Protein ST13 homolog) (Protein
FAM10A1)
Length = 369
Score = 67.4 bits (163), Expect = 1e-11
Identities = 31/62 (50%), Positives = 45/62 (72%)
Frame = +3
Query: 3 GIPSGLGDLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQSKFGG 182
G+P GL ++ +DPE++ ++DPEVM A +V NPA + KYQ+NPKV +I K+ +KFGG
Sbjct: 309 GMP-GLNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
Query: 183 AA 188
A
Sbjct: 368 QA 369
>sp|P50503|F10A1_RAT Hsc70-interacting protein (Hip) (Protein ST13 homolog) (Protein
FAM10A1)
Length = 368
Score = 67.0 bits (162), Expect = 1e-11
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = +3
Query: 3 GIPSGLGDLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQSKFGG 182
G+P GL ++ +DPE++ ++DPEVM A +V NP+ + KYQNNPKV +I K+ +KFGG
Sbjct: 308 GMP-GLNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQNNPKVMNLISKLSAKFGG 366
>sp|Q8NFI4|F10A5_HUMAN Protein FAM10A5
Length = 369
Score = 66.6 bits (161), Expect = 2e-11
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +3
Query: 3 GIPSGLGDLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQSKFGG 182
G+P GL ++ +DPE + ++DPEVM A +V NPA + KYQ+NPKV +I K+ +KFGG
Sbjct: 309 GMP-GLNEILSDPEALAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
Query: 183 AA 188
A
Sbjct: 368 QA 369
>sp|Q5ZLF0|F10A1_CHICK Hsc70-interacting protein (Hip) (Protein ST13 homolog) (Protein
FAM10A1)
Length = 361
Score = 65.9 bits (159), Expect = 3e-11
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = +3
Query: 3 GIPSGLGDLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQSKFG 179
G+P GL ++ +DPE++ ++DPEVM A +V NPA + KYQNNPKV +I K+ +KFG
Sbjct: 301 GMP-GLNEILSDPEVLAAMQDPEVMAAFQDVAQNPANMSKYQNNPKVMSLITKLSAKFG 358
>sp|Q99L47|F10A1_MOUSE Hsc70-interacting protein (Hip) (Protein ST13 homolog) (Protein
FAM10A1)
Length = 371
Score = 65.1 bits (157), Expect = 5e-11
Identities = 29/60 (48%), Positives = 44/60 (73%)
Frame = +3
Query: 3 GIPSGLGDLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQSKFGG 182
G+P GL ++ +DPE++ ++DPEVM A +V NP+ + KYQ+NPKV +I K+ +KFGG
Sbjct: 311 GMP-GLNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQSNPKVMNLISKLSAKFGG 369
>sp|Q08168|HRP_PLABE 58 kDa phosphoprotein (Heat shock-related protein) (HRP)
Length = 423
Score = 42.0 bits (97), Expect = 4e-04
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 GIPSGLGDLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKMQ-SKFG 179
G+P G+ DL N PE+ E +P+ + + +++NP + KY ++PK I + ++ S G
Sbjct: 356 GMPGGMPDL-NSPEMKELFNNPQFFQMMQNMMSNPDLINKYASDPKYKNIFENLKNSDLG 414
Query: 180 GAAG 191
G G
Sbjct: 415 GMMG 418
>sp|Q9USI5|STI1_SCHPO Heat shock protein sti1 homolog
Length = 591
Score = 37.4 bits (85), Expect = 0.011
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 36 DPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKM 164
DPE++ L+DP + L + NPAAL+++ NP V I+K+
Sbjct: 540 DPEVLGILQDPAMQAILGQARENPAALMEHMKNPTVKSKIEKL 582
Score = 30.4 bits (67), Expect = 1.3
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 9 PSGLGDLFNDPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKII 155
P + L ++PE L D M L ++ NP +++ N+P++ K+I
Sbjct: 140 PKFMEKLASNPETASLLADSAFMAKLQKIQQNPGSIMAELNDPRMMKVI 188
>sp|P15705|STI1_YEAST Heat shock protein STI1
Length = 589
Score = 35.4 bits (80), Expect = 0.040
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +3
Query: 36 DPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKM 164
DPE+ ++DP + L + NPAAL ++ NP+V K I+ +
Sbjct: 537 DPEVAAIMQDPVMQSILQQAQQNPAALQEHMKNPEVFKKIQTL 579
Score = 28.9 bits (63), Expect = 3.8
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Frame = +3
Query: 15 GLGDLFNDPELVEDL-KDPEVMKALTEVITNP---AALLKYQNNPK 140
GL LF DP L+E+L K+P+ +E++ +P A L+ Y+ NP+
Sbjct: 131 GLTQLFADPNLIENLKKNPKT----SEMMKDPQLVAKLIGYKQNPQ 172
>sp|Q60864|STIP1_MOUSE Stress-induced-phosphoprotein 1 (STI1) (Hsc70/Hsp90-organizing
protein) (Hop) (mSTI1)
Length = 543
Score = 32.0 bits (71), Expect = 0.45
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 36 DPELVEDLKDPEVMKALTEVITNPAALLKYQNNPKVAKIIKKM 164
DPE+ + + DP + L ++ +P AL ++ NP +A+ I+K+
Sbjct: 492 DPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKL 534
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,600,350
Number of Sequences: 369166
Number of extensions: 599692
Number of successful extensions: 2005
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2005
length of database: 68,354,980
effective HSP length: 77
effective length of database: 54,130,385
effective search space used: 1678041935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)