Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_N19
(959 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 559 e-159
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 559 e-159
sp|P53458|ACT5_DIPDE Actin-5 559 e-159
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 558 e-159
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 558 e-159
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 558 e-159
sp|P92176|ACT2_LUMTE Actin-2 558 e-159
sp|P12716|ACTC_PISOC Actin, cytoplasmic 558 e-158
sp|P53470|ACT1_SCHMA Actin-1 557 e-158
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 557 e-158
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 559 bits (1441), Expect = e-159
Identities = 273/289 (94%), Positives = 283/289 (97%)
Frame = +2
Query: 2 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 181
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 182 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 361
RTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 362 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 541
EIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSF 267
Query: 542 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 721
LG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMK 327
Query: 722 IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 868
IKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 559 bits (1441), Expect = e-159
Identities = 273/289 (94%), Positives = 284/289 (98%)
Frame = +2
Query: 2 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 181
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 182 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 361
RTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 362 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 541
EIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 267
Query: 542 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 721
LG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMK 327
Query: 722 IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 868
IKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 559 bits (1440), Expect = e-159
Identities = 275/289 (95%), Positives = 283/289 (97%)
Frame = +2
Query: 2 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 181
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASG
Sbjct: 83 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 142
Query: 182 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 361
RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 143 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 202
Query: 362 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 541
EIVRDIKEKLCY+ALDF+ EM A++SS+LEKSYELPDGQVITIGNERFRCPEALFQPSF
Sbjct: 203 EIVRDIKEKLCYVALDFEQEMSNAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSF 262
Query: 542 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 721
LG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMYPGI+DRMQKEISALAP TMK
Sbjct: 263 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGISDRMQKEISALAPSTMK 322
Query: 722 IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 868
IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 323 IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 371
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 558 bits (1439), Expect = e-159
Identities = 272/289 (94%), Positives = 283/289 (97%)
Frame = +2
Query: 2 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 181
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 182 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 361
RTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 362 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 541
EIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA++QPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMYQPSF 267
Query: 542 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 721
LG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMK 327
Query: 722 IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 868
IKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 558 bits (1439), Expect = e-159
Identities = 273/289 (94%), Positives = 282/289 (97%)
Frame = +2
Query: 2 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 181
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 182 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 361
RTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 362 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 541
EIVRDIKEKLCY+ALDF+ EM TA+ SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSF 267
Query: 542 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 721
LG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMK 327
Query: 722 IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 868
IKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 558 bits (1439), Expect = e-159
Identities = 272/289 (94%), Positives = 283/289 (97%)
Frame = +2
Query: 2 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 181
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 182 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 361
RTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 362 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 541
EIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSF 267
Query: 542 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 721
LG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMK 327
Query: 722 IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 868
IKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 558 bits (1438), Expect = e-159
Identities = 274/289 (94%), Positives = 283/289 (97%)
Frame = +2
Query: 2 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 181
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 147
Query: 182 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 361
RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 362 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 541
EIVRDIKEKLCY+ALDF+ EM TASASSSLEKSYELPDGQVITIGNERFRCPEA+F SF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMNTASASSSLEKSYELPDGQVITIGNERFRCPEAMFHASF 267
Query: 542 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 721
LG+ESVGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMESVGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPPTMK 327
Query: 722 IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 868
IKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 558 bits (1437), Expect = e-158
Identities = 272/289 (94%), Positives = 283/289 (97%)
Frame = +2
Query: 2 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 181
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 182 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 361
RTTGIV DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 362 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 541
EIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 267
Query: 542 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 721
LG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKE++ALAPPTMK
Sbjct: 268 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEVTALAPPTMK 327
Query: 722 IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 868
IKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>sp|P53470|ACT1_SCHMA Actin-1
Length = 376
Score = 557 bits (1436), Expect = e-158
Identities = 274/289 (94%), Positives = 283/289 (97%)
Frame = +2
Query: 2 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 181
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASG 147
Query: 182 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 361
RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY+MKILTERGYSFTTTAER
Sbjct: 148 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAER 207
Query: 362 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 541
EIVRDIKEKLCY+ALDF+ EM TA++SS+LEKSYELPDGQVITIGNERFRCPEALFQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMGTAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSF 267
Query: 542 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 721
LG+E+ GIHETTYNSIMKCDVDIRKDLY+N VLSGGSTMYPGIADRMQKEISALAP TMK
Sbjct: 268 LGMEASGIHETTYNSIMKCDVDIRKDLYSNTVLSGGSTMYPGIADRMQKEISALAPSTMK 327
Query: 722 IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 868
IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF
Sbjct: 328 IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 557 bits (1436), Expect = e-158
Identities = 272/289 (94%), Positives = 282/289 (97%)
Frame = +2
Query: 2 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 181
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 182 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 361
RTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 362 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 541
EIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEATFQPSF 267
Query: 542 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 721
LG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMK 327
Query: 722 IKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 868
IKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKCF
Sbjct: 328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,731,822
Number of Sequences: 369166
Number of extensions: 2290791
Number of successful extensions: 6812
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6640
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 9952674160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)