Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_M19
(799 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P91754|ACT_LUMRU Actin 440 e-123
sp|P92182|ACT1_LUMTE Actin-1 440 e-123
sp|Q26065|ACT_PLAMG Actin, adductor muscle 440 e-123
sp|P92176|ACT2_LUMTE Actin-2 439 e-123
sp|P10984|ACT2_CAEEL Actin-2 438 e-123
sp|P41340|ACT3_LIMPO Actin-3 438 e-123
sp|P53458|ACT5_DIPDE Actin-5 438 e-123
sp|P53464|ACTM_HELTB Actin, cytoskeletal (M) 438 e-123
sp|P30163|ACT2_ONCVO Actin-2 438 e-123
sp|P30162|ACT1_ONCVO Actin-1 438 e-123
>sp|P91754|ACT_LUMRU Actin
Length = 372
Score = 440 bits (1132), Expect = e-123
Identities = 214/217 (98%), Positives = 217/217 (100%)
Frame = +1
Query: 1 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 180
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL
Sbjct: 5 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 64
Query: 181 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 360
KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 65 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 124
Query: 361 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 540
N+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 125 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 184
Query: 541 YLMKILTERGYSFTTTAEREIVRDIREKLCYIALDFD 651
YLMKILTERGYSFTTTAEREIVRDI+EKLCY+ALDFD
Sbjct: 185 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFD 221
>sp|P92182|ACT1_LUMTE Actin-1
Length = 376
Score = 440 bits (1132), Expect = e-123
Identities = 214/217 (98%), Positives = 217/217 (100%)
Frame = +1
Query: 1 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 180
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 181 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 360
KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 361 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 540
N+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 129 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 188
Query: 541 YLMKILTERGYSFTTTAEREIVRDIREKLCYIALDFD 651
YLMKILTERGYSFTTTAEREIVRDI+EKLCY+ALDFD
Sbjct: 189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFD 225
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 440 bits (1131), Expect = e-123
Identities = 214/217 (98%), Positives = 217/217 (100%)
Frame = +1
Query: 1 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 180
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 181 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 360
KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 361 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 540
NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 129 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 188
Query: 541 YLMKILTERGYSFTTTAEREIVRDIREKLCYIALDFD 651
YLMKILTERGYSFTTTAEREIVRDI+EKLCY+ALDF+
Sbjct: 189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 439 bits (1128), Expect = e-123
Identities = 213/217 (98%), Positives = 217/217 (100%)
Frame = +1
Query: 1 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 180
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 181 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 360
KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 361 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 540
N+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 129 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 188
Query: 541 YLMKILTERGYSFTTTAEREIVRDIREKLCYIALDFD 651
YLMKILTERGYSFTTTAEREIVRDI+EKLCY+ALDF+
Sbjct: 189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 438 bits (1127), Expect = e-123
Identities = 213/217 (98%), Positives = 216/217 (99%)
Frame = +1
Query: 1 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 180
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 181 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 360
KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 361 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 540
N PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 188
Query: 541 YLMKILTERGYSFTTTAEREIVRDIREKLCYIALDFD 651
YLMKILTERGYSFTTTAEREIVRDI+EKLCY+ALDF+
Sbjct: 189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
>sp|P41340|ACT3_LIMPO Actin-3
Length = 376
Score = 438 bits (1127), Expect = e-123
Identities = 213/217 (98%), Positives = 216/217 (99%)
Frame = +1
Query: 1 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 180
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 181 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 360
KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 361 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 540
N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 188
Query: 541 YLMKILTERGYSFTTTAEREIVRDIREKLCYIALDFD 651
YLMKILTERGYSFTTTAEREIVRDI+EKLCY+ALDFD
Sbjct: 189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFD 225
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 438 bits (1127), Expect = e-123
Identities = 212/217 (97%), Positives = 217/217 (100%)
Frame = +1
Query: 1 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 180
LV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL
Sbjct: 4 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 63
Query: 181 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 360
KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 64 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 123
Query: 361 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 540
N+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 124 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 183
Query: 541 YLMKILTERGYSFTTTAEREIVRDIREKLCYIALDFD 651
YLMKILTERGYSFTTTAEREIVRDI+EKLCY+ALDF+
Sbjct: 184 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 220
>sp|P53464|ACTM_HELTB Actin, cytoskeletal (M)
Length = 376
Score = 438 bits (1127), Expect = e-123
Identities = 214/217 (98%), Positives = 216/217 (99%)
Frame = +1
Query: 1 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 180
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 181 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 360
KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 361 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 540
NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 129 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 188
Query: 541 YLMKILTERGYSFTTTAEREIVRDIREKLCYIALDFD 651
YLMKILTERGYSFTTTAEREIVRDI+EKLCY ALDF+
Sbjct: 189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYTALDFE 225
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 438 bits (1127), Expect = e-123
Identities = 213/217 (98%), Positives = 216/217 (99%)
Frame = +1
Query: 1 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 180
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 181 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 360
KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 361 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 540
N PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 188
Query: 541 YLMKILTERGYSFTTTAEREIVRDIREKLCYIALDFD 651
YLMKILTERGYSFTTTAEREIVRDI+EKLCY+ALDF+
Sbjct: 189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
>sp|P30162|ACT1_ONCVO Actin-1
Length = 376
Score = 438 bits (1127), Expect = e-123
Identities = 213/217 (98%), Positives = 216/217 (99%)
Frame = +1
Query: 1 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 180
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 181 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 360
KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
Query: 361 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 540
N PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 129 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 188
Query: 541 YLMKILTERGYSFTTTAEREIVRDIREKLCYIALDFD 651
YLMKILTERGYSFTTTAEREIVRDI+EKLCY+ALDF+
Sbjct: 189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,918,619
Number of Sequences: 369166
Number of extensions: 1777515
Number of successful extensions: 5920
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5824
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7522142940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)